##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935652.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1225592 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05917058858086 33.0 31.0 34.0 30.0 34.0 2 32.08079279238115 33.0 31.0 34.0 30.0 34.0 3 32.07343063597021 33.0 31.0 34.0 30.0 34.0 4 35.7588512327104 37.0 35.0 37.0 33.0 37.0 5 35.82390469258938 37.0 35.0 37.0 35.0 37.0 6 35.757478018786024 37.0 35.0 37.0 35.0 37.0 7 36.02918834326595 37.0 35.0 37.0 35.0 37.0 8 35.84537431706473 37.0 35.0 37.0 35.0 37.0 9 37.66118822577171 39.0 38.0 39.0 35.0 39.0 10 37.319373820977944 39.0 37.0 39.0 34.0 39.0 11 37.307637451941595 39.0 37.0 39.0 34.0 39.0 12 37.15793836774392 39.0 37.0 39.0 34.0 39.0 13 37.05341663457333 39.0 37.0 39.0 33.0 39.0 14 37.96586873935208 40.0 37.0 41.0 33.0 41.0 15 38.13236868386869 40.0 37.0 41.0 33.0 41.0 16 37.995988061279775 40.0 37.0 41.0 33.0 41.0 17 38.05535692138982 40.0 37.0 41.0 33.0 41.0 18 37.966288944444806 40.0 37.0 41.0 33.0 41.0 19 37.810028133342904 40.0 36.0 41.0 33.0 41.0 20 37.904436386660485 40.0 36.0 41.0 33.0 41.0 21 37.83450936363814 40.0 36.0 41.0 33.0 41.0 22 37.97108254623072 40.0 36.0 41.0 34.0 41.0 23 38.00625085672883 40.0 36.0 41.0 34.0 41.0 24 37.91852835201274 40.0 36.0 41.0 34.0 41.0 25 37.66636694756493 39.0 35.0 41.0 33.0 41.0 26 37.71136805723275 40.0 35.0 41.0 33.0 41.0 27 37.7239644188278 40.0 35.0 41.0 33.0 41.0 28 37.593669018727276 40.0 35.0 41.0 33.0 41.0 29 37.554970985450296 40.0 35.0 41.0 33.0 41.0 30 37.35286457483404 39.0 35.0 41.0 33.0 41.0 31 37.27582343879529 39.0 35.0 41.0 33.0 41.0 32 37.215600297652074 39.0 35.0 41.0 33.0 41.0 33 37.123860142690226 39.0 35.0 41.0 32.0 41.0 34 37.016356177259645 39.0 35.0 41.0 32.0 41.0 35 36.89830873569671 39.0 35.0 41.0 31.0 41.0 36 36.782683796891625 39.0 35.0 41.0 31.0 41.0 37 36.76780119321928 39.0 35.0 41.0 31.0 41.0 38 36.60209923041273 39.0 35.0 41.0 31.0 41.0 39 36.52181068414285 39.0 35.0 41.0 31.0 41.0 40 36.38863667517412 39.0 35.0 41.0 30.0 41.0 41 36.23329949934399 39.0 35.0 41.0 30.0 41.0 42 36.28112047076025 39.0 35.0 41.0 30.0 41.0 43 36.23205846643908 39.0 35.0 41.0 30.0 41.0 44 36.108505114263146 38.0 35.0 41.0 30.0 41.0 45 36.08913733118362 38.0 35.0 40.0 30.0 41.0 46 35.977304845331886 38.0 35.0 40.0 30.0 41.0 47 35.87824088277338 38.0 35.0 40.0 30.0 41.0 48 35.7678713633901 38.0 35.0 40.0 30.0 41.0 49 35.76484833451916 38.0 35.0 40.0 29.0 41.0 50 35.61149305804868 38.0 35.0 40.0 29.0 41.0 51 34.40294894222547 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 13.0 9 33.0 10 33.0 11 31.0 12 24.0 13 41.0 14 47.0 15 72.0 16 111.0 17 196.0 18 387.0 19 641.0 20 1056.0 21 1800.0 22 2936.0 23 4197.0 24 6019.0 25 8539.0 26 11102.0 27 12937.0 28 14472.0 29 16328.0 30 19569.0 31 24408.0 32 32454.0 33 46503.0 34 87883.0 35 97597.0 36 90575.0 37 133349.0 38 235248.0 39 376778.0 40 213.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.368259583939846 18.701574422809546 21.82520773634293 17.104958256907683 2 32.2768914940698 25.53957597634449 24.513704397548285 17.669828132037416 3 31.492209479174143 24.58877016168513 27.406510486360876 16.512509872779848 4 28.02963792191855 23.80833099432764 28.725301731734543 19.43672935201927 5 25.542513332332454 27.957264734104008 26.77008335563548 19.730138577928056 6 24.41701642961116 33.16470734143173 27.057291496680786 15.36098473227632 7 76.19183219211614 5.841177161730821 12.49086155914856 5.476129087004485 8 76.62207325113089 6.557892022793882 11.118218787328898 5.7018159387463365 9 70.79125842857982 6.962839183023388 13.69362724299767 8.552275145399122 10 41.301101834868376 22.370740017885236 20.616648933739775 15.711509213506616 11 31.14910998113565 24.422156802590095 25.21605885155908 19.212674364715173 12 28.21787348481387 20.138349467033077 30.9328063499109 20.710970698242157 13 26.19444317521655 21.45322423775612 33.05847296653373 19.293859620493606 14 20.473044863217122 25.53851526445995 33.158751036233916 20.82968883608901 15 19.07062056540839 24.527085685937898 35.28825253428547 21.11404121436824 16 23.76720801049615 24.235797883798195 30.247015319943344 21.74997878576231 17 23.428269766773933 24.627526942081868 28.476605591420313 23.46759769972389 18 24.360553920064753 23.777488756454023 29.89559331327228 21.966364010208945 19 23.952506217403506 26.749929829829178 26.706359049341057 22.591204903426263 20 23.64277834711715 28.066273278546205 27.40822394402052 20.882724430316124 21 23.857858080013578 27.290729704501988 29.411990287142864 19.43942192834157 22 21.713343429134653 23.340393866800696 30.595581563848327 24.35068114021632 23 21.339075320334988 25.634468893400086 29.95409565336588 23.07236013289904 24 22.769975652582588 25.290145497033272 28.757286274714588 23.182592575669553 25 23.844068825514526 26.76902264375094 25.890997983015556 23.495910547718978 26 20.7369173428025 25.1762413592778 28.1470505682152 25.939790729704505 27 22.144808386477717 24.033038727406836 28.739090986233588 25.083061899881855 28 20.17351614566675 24.654371112082977 29.775324904209562 25.39678783804072 29 21.819577804032665 24.90600460838517 29.667132291986242 23.607285295595926 30 22.468488697706903 23.860958622445317 30.471233493691212 23.19931918615657 31 22.79559592425538 24.091785847166104 29.53299303520258 23.579625193375936 32 23.360873765494553 24.101413847348873 29.073460009530088 23.464252377626487 33 22.70364036318775 23.949568861415543 27.078668920815407 26.268121854581295 34 20.052431804385147 23.984490760383554 30.68443658248422 25.27864085274708 35 19.418044504206946 24.734577249198754 28.53339447385427 27.31398377274003 36 21.435436915384564 25.23694671636238 26.967212579716577 26.36040378853648 37 19.68436478044896 25.092934679730284 28.912476582745317 26.31022395707544 38 20.881337345544033 25.85093571106861 28.200330942107975 25.06739600127938 39 20.96284897421001 23.931128793268886 27.49658940332509 27.609432829196013 40 22.8762100274806 23.255128949927872 29.077294890958814 24.791366131632714 41 20.187713366275236 22.915864333318105 27.713219407437386 29.183202892969273 42 20.611345374317064 22.937568130340278 29.70621544527053 26.744871050072128 43 21.268170810514427 21.975992010391714 30.270106201737608 26.485730977356248 44 22.47330269779829 22.73121887218585 28.80044908909327 25.995029340922592 45 21.34756101541133 22.297061338520486 28.20098368788308 28.154393958185103 46 22.50308422378736 22.956008198486934 28.044406295080254 26.496501282645447 47 19.492131149681132 23.46221254707929 31.2462875084041 25.799368794835477 48 19.957212514442 24.25456432483241 29.888657889411814 25.89956527131378 49 21.806930854640044 22.227625506693908 30.7269466510878 25.238496987578245 50 20.69962924039974 22.26703503286575 30.339542033564186 26.69379369317032 51 20.166009569253063 22.172223709032043 28.546449389356326 29.115317332358565 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4834.0 1 4178.0 2 3522.0 3 8565.5 4 13609.0 5 8616.0 6 3623.0 7 3512.5 8 3402.0 9 3460.0 10 3518.0 11 3427.5 12 3337.0 13 3279.0 14 3221.0 15 3151.0 16 3081.0 17 3092.5 18 3104.0 19 3074.5 20 3045.0 21 3432.0 22 3819.0 23 3867.0 24 3915.0 25 4597.5 26 6180.5 27 7081.0 28 8147.0 29 9213.0 30 11206.5 31 13200.0 32 15042.5 33 16885.0 34 20515.0 35 24145.0 36 26673.5 37 29202.0 38 32436.5 39 35671.0 40 40412.5 41 45154.0 42 49990.5 43 54827.0 44 62315.5 45 69804.0 46 95302.5 47 120801.0 48 123102.5 49 125404.0 50 125308.5 51 125213.0 52 108865.5 53 92518.0 54 82223.5 55 71929.0 56 68610.5 57 65292.0 58 62006.5 59 58721.0 60 55038.0 61 51355.0 62 45991.5 63 40628.0 64 36792.0 65 32956.0 66 28593.0 67 24230.0 68 20438.0 69 16646.0 70 14564.5 71 12483.0 72 10592.5 73 8702.0 74 7054.5 75 4393.5 76 3380.0 77 2687.0 78 1994.0 79 1326.5 80 659.0 81 565.5 82 472.0 83 312.5 84 153.0 85 114.0 86 75.0 87 57.5 88 40.0 89 31.0 90 22.0 91 15.5 92 9.0 93 7.5 94 6.0 95 4.0 96 2.0 97 2.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1225592.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.05170840881281 #Duplication Level Percentage of deduplicated Percentage of total 1 72.87070257875743 21.170184028633845 2 10.424065711509042 6.05673834970129 3 3.924984511257241 3.4208251659045605 4 2.0322773802012652 2.361645194217327 5 1.2459935555354609 1.809912072733806 6 0.9034678233985115 1.5748370257271005 7 0.7138601105614022 1.451719904369891 8 0.5447778216398362 1.2661381137495005 9 0.447817350433041 1.1708873176669066 >10 6.485613739956252 44.48370574906545 >50 0.34011195943978506 6.034180602000789 >100 0.05531992184610525 2.834057088447736 >500 0.005927134481001977 1.2693112206173567 >1k 0.004233667486429984 3.2956173500680106 >5k 8.467334972859967E-4 1.800240817096516 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8932 0.7287906579024667 No Hit GAATCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTC 7988 0.6517666564403163 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGC 5035 0.4108218722054321 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCG 4906 0.4002963465818968 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4089 0.3336346842995059 No Hit GCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGC 4004 0.32669926043903685 TruSeq Adapter, Index 19 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGC 3350 0.27333729332436896 TruSeq Adapter, Index 19 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTG 3241 0.26444363213859096 TruSeq Adapter, Index 13 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCT 2840 0.23172475016155458 No Hit CGTCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCT 2743 0.22381020763843104 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2596 0.211816004020914 No Hit CTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGCT 2454 0.20022976651283628 TruSeq Adapter, Index 13 (95% over 23bp) CGTTTCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTT 2308 0.18831715611720704 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTC 2044 0.166776545538809 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCT 1687 0.13764776532483894 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCC 1523 0.12426647693522803 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1258 0.10264427313494214 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.527457751029707E-4 0.0 0.0 0.2114080379114746 0.0 2 6.527457751029707E-4 0.0 0.0 0.9918472052689639 0.0 3 6.527457751029707E-4 0.0 0.0 1.559409656720997 0.0 4 6.527457751029707E-4 0.0 0.0 2.421686825632021 0.0 5 6.527457751029707E-4 0.0 0.0 4.438752863922089 0.0 6 6.527457751029707E-4 0.0 0.0 5.98225184237495 0.0 7 6.527457751029707E-4 0.0 0.0 7.200438645160869 0.0 8 6.527457751029707E-4 0.0 0.0 8.744100810057507 0.0 9 6.527457751029707E-4 0.0 0.0 9.538410825135934 0.0 10 6.527457751029707E-4 0.0 0.0 11.210092755174642 0.0 11 6.527457751029707E-4 0.0 0.0 12.680647393259747 0.0 12 6.527457751029707E-4 0.0 0.0 14.233366405785938 0.0 13 6.527457751029707E-4 0.0 0.0 14.805008518332365 0.0 14 6.527457751029707E-4 0.0 0.0 15.132034151658953 0.0 15 6.527457751029707E-4 0.0 0.0 15.52808765070268 0.0 16 6.527457751029707E-4 0.0 0.0 16.082839966318318 0.0 17 6.527457751029707E-4 0.0 0.0 16.704253944216347 0.0 18 6.527457751029707E-4 0.0 0.0 17.44805775494618 0.0 19 7.34338996990842E-4 0.0 0.0 17.935822035391876 0.0 20 8.159322188787133E-4 0.0 0.0 18.41248963766082 0.0 21 8.159322188787133E-4 0.0 0.0 18.932075274642784 0.0 22 8.159322188787133E-4 0.0 0.0 19.521504709560766 0.0 23 8.975254407665846E-4 0.0 0.0 20.045088414415236 0.0 24 8.975254407665846E-4 0.0 0.0 20.483244015953108 0.0 25 8.975254407665846E-4 0.0 0.0 20.87937910821872 0.0 26 9.79118662654456E-4 0.0 0.0 21.266294166411008 0.0 27 9.79118662654456E-4 0.0 0.0 21.772416921781474 0.0 28 9.79118662654456E-4 0.0 0.0 22.19653848915463 0.0 29 9.79118662654456E-4 0.0 0.0 22.658274531818094 0.0 30 9.79118662654456E-4 0.0 0.0 23.247214407404748 0.0 31 9.79118662654456E-4 0.0 0.0 23.680882381738783 0.0 32 9.79118662654456E-4 0.0 0.0 24.10614625421837 0.0 33 9.79118662654456E-4 0.0 0.0 24.55678561870508 0.0 34 9.79118662654456E-4 0.0 0.0 25.014360407052266 0.0 35 9.79118662654456E-4 0.0 0.0 25.52619468795488 0.0 36 9.79118662654456E-4 0.0 0.0 25.93766930593542 0.0 37 9.79118662654456E-4 0.0 0.0 26.385371314434167 0.0 38 0.0010607118845423274 0.0 0.0 26.88268200184074 0.0 39 0.0010607118845423274 0.0 0.0 27.659857440322718 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGTACG 20 7.033469E-4 45.000004 1 TAACGCC 40 6.8157533E-9 45.000004 12 ATAACGC 40 6.8157533E-9 45.000004 11 TCGCTAA 25 3.890958E-5 45.0 32 ACTACGC 35 1.2120108E-7 45.0 23 CGTTTTT 3360 0.0 41.450893 1 TCGTTTA 50 1.0822987E-9 40.5 38 GCCGATA 45 1.9284926E-8 40.0 9 CGTCATA 40 3.4584627E-7 39.375004 38 TATTGCG 75 0.0 39.000004 1 TAGCCGT 110 0.0 38.863636 44 TCACGAC 70 0.0 38.571426 25 ATTAGCG 35 6.2486306E-6 38.571426 1 ATTAACG 35 6.2486306E-6 38.571426 1 TTAACGG 90 0.0 37.5 2 GTAAGCG 90 0.0 37.5 1 TACCCGC 60 1.5643309E-10 37.499996 28 GTTAACG 30 1.1399662E-4 37.499996 1 TTACCCG 60 1.5643309E-10 37.499996 27 TAGGGCG 355 0.0 37.394363 5 >>END_MODULE