##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935650.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 336764 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.013225879250754 33.0 31.0 34.0 30.0 34.0 2 32.021406682424484 33.0 31.0 34.0 30.0 34.0 3 32.04430996187241 33.0 31.0 34.0 30.0 34.0 4 35.71400446603556 37.0 35.0 37.0 33.0 37.0 5 35.78759012245965 37.0 35.0 37.0 35.0 37.0 6 35.73306826145313 37.0 35.0 37.0 35.0 37.0 7 36.00900333764892 37.0 35.0 37.0 35.0 37.0 8 35.78630435557245 37.0 35.0 37.0 35.0 37.0 9 37.60725908945137 39.0 37.0 39.0 35.0 39.0 10 37.25794918696773 39.0 37.0 39.0 34.0 39.0 11 37.26892126236771 39.0 37.0 39.0 34.0 39.0 12 37.09041643406065 39.0 37.0 39.0 34.0 39.0 13 36.915768906415174 39.0 35.0 39.0 33.0 39.0 14 37.99163806107541 40.0 37.0 41.0 33.0 41.0 15 38.096058367283916 40.0 37.0 41.0 33.0 41.0 16 37.972440640923615 40.0 36.0 41.0 33.0 41.0 17 37.982988086612586 40.0 36.0 41.0 33.0 41.0 18 37.90715159577627 40.0 36.0 41.0 33.0 41.0 19 37.77280528797615 40.0 36.0 41.0 33.0 41.0 20 37.87258733118742 40.0 36.0 41.0 33.0 41.0 21 37.840980627382976 40.0 36.0 41.0 33.0 41.0 22 37.97145775676735 40.0 36.0 41.0 34.0 41.0 23 37.99553099499946 40.0 36.0 41.0 34.0 41.0 24 37.92010131724294 40.0 36.0 41.0 34.0 41.0 25 37.700175790761485 40.0 35.0 41.0 33.0 41.0 26 37.77525507477046 40.0 35.0 41.0 33.0 41.0 27 37.77651708614935 40.0 35.0 41.0 33.0 41.0 28 37.65966967965697 40.0 35.0 41.0 33.0 41.0 29 37.6438010001069 40.0 36.0 41.0 33.0 41.0 30 37.52721193476737 40.0 35.0 41.0 33.0 41.0 31 37.49283474480645 40.0 35.0 41.0 33.0 41.0 32 37.436569823377795 40.0 35.0 41.0 33.0 41.0 33 37.35849140644487 40.0 35.0 41.0 33.0 41.0 34 37.29752586380967 40.0 35.0 41.0 33.0 41.0 35 37.227355061704934 40.0 35.0 41.0 32.0 41.0 36 37.10582485063724 40.0 35.0 41.0 32.0 41.0 37 37.113192027651415 40.0 35.0 41.0 32.0 41.0 38 36.94766364575786 39.0 35.0 41.0 32.0 41.0 39 36.914097112517965 39.0 35.0 41.0 32.0 41.0 40 36.82345203168985 39.0 35.0 41.0 31.0 41.0 41 36.660542694587306 39.0 35.0 41.0 31.0 41.0 42 36.74086897649392 39.0 35.0 41.0 31.0 41.0 43 36.60533489327838 39.0 35.0 41.0 31.0 41.0 44 36.55286788374054 39.0 35.0 41.0 31.0 41.0 45 36.56103383972159 39.0 35.0 41.0 31.0 41.0 46 36.43597890510862 39.0 35.0 41.0 31.0 41.0 47 36.337580620256325 39.0 35.0 41.0 31.0 41.0 48 36.25997137461249 38.0 35.0 40.0 31.0 41.0 49 36.2228474540034 38.0 35.0 40.0 31.0 41.0 50 36.10187549738095 38.0 35.0 40.0 30.0 41.0 51 34.9651239443646 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 5.0 10 7.0 11 4.0 12 8.0 13 11.0 14 7.0 15 20.0 16 20.0 17 37.0 18 73.0 19 165.0 20 343.0 21 580.0 22 805.0 23 1122.0 24 1483.0 25 1990.0 26 2518.0 27 3038.0 28 3276.0 29 3832.0 30 4938.0 31 6353.0 32 8554.0 33 11931.0 34 22536.0 35 30961.0 36 22662.0 37 34479.0 38 64204.0 39 110741.0 40 57.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.86702854224323 18.50969818626694 22.970685702747325 13.652587568742502 2 29.208882184556543 28.566889572519628 24.655842073380764 17.568386169543064 3 29.93490990723474 27.320319274031668 26.486203988549846 16.25856683018375 4 28.0677269541875 24.692366167405066 29.757634426482642 17.48227245192479 5 26.915584801225783 29.416742882255825 24.302775831145848 19.364896485372547 6 23.060065802758015 36.63871435189034 25.08641066147213 15.214809183879513 7 75.96655224430164 6.818424772244064 12.642384577924007 4.572638405530283 8 75.75334655723296 8.94691831668468 9.86299010583079 5.436745020251571 9 70.22543977384757 8.521694717962728 11.03176111460845 10.221104393581262 10 41.32270670261667 24.208347685619604 19.269874452138588 15.199071159625138 11 33.94246415887684 24.649903196303644 23.62960411445404 17.77802853036548 12 30.03022888432255 20.398854984499533 28.394662137283085 21.176253993894832 13 24.29624306636101 25.49649012364742 30.35894573054127 19.848321079450297 14 19.714102457507334 29.60411445403903 27.949246356498914 22.732536731954724 15 17.776840754950054 25.730184936632185 37.05235714031191 19.440617168105852 16 21.227922224465797 24.310496371346105 32.03846016795144 22.42312123623665 17 21.005511277927567 25.295459134586835 28.873335629699138 24.825693957786463 18 21.427171550403248 26.061574277535605 29.806630162368897 22.70462400969225 19 23.930111294556426 27.49284365312207 26.38257058355406 22.194474468767446 20 26.298832416766636 26.10552196790631 28.67052297751541 18.925122637811644 21 23.72818947393427 29.73239419890487 26.723759071634735 19.815657255526126 22 20.70500409782518 26.044054590158094 28.10454799206566 25.146393319951066 23 20.851991305483956 28.63310805192954 28.110189925288925 22.404710717297576 24 23.20556829114751 24.729187205283225 28.197194474468766 23.868050029100498 25 20.996602962311886 29.093371025406515 26.417609958309086 23.492416053972516 26 20.267011913387417 26.85471131118528 28.61885474694445 24.259422028482856 27 22.007696784691948 26.9601263793042 27.68288771958998 23.349289116413868 28 19.118136142818116 28.191255597391645 30.47980187906071 22.21080638072953 29 21.822997707593448 26.35762729983015 28.213526386430853 23.60584860614555 30 21.193773681272347 27.159969592949366 27.970032426268844 23.67622429950945 31 23.4674727702486 28.13186682662042 24.50261904479101 23.898041358339967 32 25.497677899062843 28.01991899371667 24.254077039113444 22.228326068107044 33 22.90624888646055 28.636077490468104 24.962882018267987 23.494791604803364 34 22.817759618011426 26.955078333788645 28.51106412799468 21.716097920205247 35 22.006509009276527 25.522918126640615 26.651007827439987 25.81956503664287 36 22.75955862265563 28.287465406041022 27.3972277321804 21.555748239122945 37 20.86179045266121 27.759202290031 28.532147141618463 22.846860115689324 38 21.41677851551829 29.63915382879405 25.114323383734604 23.82974427195306 39 22.41183736979012 25.43531968975306 29.447031155349144 22.70581178510767 40 23.947630981933937 25.321293249872312 29.303310330082788 21.427765438110963 41 19.818329750210832 25.414533619983132 30.083084890308943 24.684051739497097 42 22.86408285921298 25.239336746208025 28.28538679906403 23.61119359551496 43 22.70432706583839 25.224786497369077 27.890748417289256 24.18013801950327 44 21.23683054008148 26.058307895143184 28.046940884417577 24.65792068035776 45 21.43251653977266 25.5440011402644 26.09483198916749 26.92865033079545 46 23.217446045301752 27.481559786675536 26.6346759154779 22.66631825254481 47 20.518226413749687 25.667826727322396 31.083488733950183 22.73045812497773 48 21.918316684681262 24.3199985746695 28.373579123659297 25.388105616989943 49 20.968690240049412 23.21002244895535 31.497725410079465 24.323561900915774 50 20.859117957976505 24.05660937629913 29.298856172274945 25.78541649344942 51 19.859901889750688 24.070565737430368 26.768894537420863 29.300637835398085 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 690.0 1 796.5 2 903.0 3 1261.0 4 1619.0 5 1170.5 6 722.0 7 735.0 8 748.0 9 976.0 10 1204.0 11 978.0 12 752.0 13 761.0 14 770.0 15 797.0 16 824.0 17 839.0 18 854.0 19 795.0 20 736.0 21 844.5 22 953.0 23 1165.0 24 1377.0 25 1681.0 26 2324.5 27 2664.0 28 3354.0 29 4044.0 30 4788.0 31 5532.0 32 6052.0 33 6572.0 34 6840.0 35 7108.0 36 7982.0 37 8856.0 38 9683.0 39 10510.0 40 12764.5 41 15019.0 42 17103.0 43 19187.0 44 21495.0 45 23803.0 46 31153.0 47 38503.0 48 35534.0 49 32565.0 50 32579.0 51 32593.0 52 28428.0 53 24263.0 54 21895.5 55 19528.0 56 17790.5 57 16053.0 58 14964.0 59 13875.0 60 13445.5 61 13016.0 62 11723.5 63 10431.0 64 8874.5 65 7318.0 66 5934.5 67 4551.0 68 3485.5 69 2420.0 70 2042.0 71 1664.0 72 1401.0 73 1138.0 74 936.5 75 554.0 76 373.0 77 252.0 78 131.0 79 110.0 80 89.0 81 62.5 82 36.0 83 33.5 84 31.0 85 20.5 86 10.0 87 5.5 88 1.0 89 1.5 90 2.0 91 3.5 92 5.0 93 2.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 336764.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.243062412681788 #Duplication Level Percentage of deduplicated Percentage of total 1 72.57336980132226 21.948409524000247 2 10.523655365752434 6.365351320720089 3 3.7163057726923894 3.371774022844367 4 1.835021928287224 2.2198673082332077 5 1.1503581945709769 1.7395177337675 6 0.8725116456947777 1.5832454493923316 7 0.6906133670389417 1.462038421367372 8 0.5526905765969098 1.3372044482337142 9 0.5416967311310923 1.4744311243508996 >10 7.308908108039902 47.87699720389965 >50 0.17190375968583782 3.264120891972329 >100 0.053969785017646765 3.0005489484775727 >500 0.00399776185315902 0.8197329251809385 >1k 0.004997202316448774 3.536760677559794 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGC 3302 0.9805086054328848 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCG 3042 0.9033032034302955 No Hit GAATCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTC 2607 0.7741326270028863 No Hit GCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGC 1695 0.5033198322861113 No Hit CCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGC 1055 0.3132757658181991 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 804 0.23874285850031476 No Hit CTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGCT 736 0.2185506764380991 Illumina Single End Adapter 2 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCT 616 0.18291741397536554 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCACATGTT 556 0.16510078274399878 No Hit GAACTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCT 500 0.14847192692805644 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCC 458 0.1360002850660997 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCACATGTTCGTA 447 0.13273390267368246 No Hit TCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGC 444 0.1318430711121141 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTC 414 0.12293475549643074 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.938877077122258E-4 0.0 0.0 0.23191314986162417 0.0 2 5.938877077122258E-4 0.0 0.0 1.3270420828829685 0.0 3 5.938877077122258E-4 0.0 0.0 1.7270254540271526 0.0 4 5.938877077122258E-4 0.0 0.0 2.343480894632443 0.0 5 5.938877077122258E-4 0.0 0.0 4.255502369611953 0.0 6 5.938877077122258E-4 0.0 0.0 5.107731230178998 0.0 7 5.938877077122258E-4 0.0 0.0 6.048449359195163 0.0 8 5.938877077122258E-4 0.0 0.0 7.340749011176967 0.0 9 5.938877077122258E-4 0.0 0.0 7.8497107766863445 0.0 10 5.938877077122258E-4 0.0 0.0 9.795286907151596 0.0 11 8.908315615683386E-4 0.0 0.0 11.104512358803197 0.0 12 8.908315615683386E-4 0.0 0.0 13.12877861054032 0.0 13 8.908315615683386E-4 0.0 0.0 13.632989274387999 0.0 14 8.908315615683386E-4 0.0 0.0 13.87202907674217 0.0 15 8.908315615683386E-4 0.0 0.0 14.325165397726598 0.0 16 0.0011877754154244516 0.0 0.0 14.99031963036429 0.0 17 0.0014847192692805644 0.0 0.0 15.761482818828616 0.0 18 0.0014847192692805644 0.0 0.0 16.70695204950648 0.0 19 0.0014847192692805644 0.0 0.0 17.39437707118338 0.0 20 0.0014847192692805644 0.0 0.0 17.965400102148685 0.0 21 0.0014847192692805644 0.0 0.0 18.586012756707962 0.0 22 0.0014847192692805644 0.0 0.0 19.216127614590633 0.0 23 0.0014847192692805644 0.0 0.0 19.877421577128196 0.0 24 0.0017816631231366772 0.0 0.0 20.405387749284365 0.0 25 0.0017816631231366772 0.0 0.0 20.87188654369232 0.0 26 0.0017816631231366772 0.0 0.0 21.299188749391266 0.0 27 0.0017816631231366772 0.0 0.0 21.749058687983275 0.0 28 0.0017816631231366772 0.0 0.0 22.19180197408274 0.0 29 0.0017816631231366772 0.0 0.0 22.619104179781687 0.0 30 0.0017816631231366772 0.0 0.0 23.136380373199035 0.0 31 0.0017816631231366772 0.0 0.0 23.601394448337707 0.0 32 0.0017816631231366772 0.0 0.0 24.0405744081909 0.0 33 0.0017816631231366772 0.0 0.0 24.470846052428406 0.0 34 0.0017816631231366772 0.0 0.0 24.910026012281598 0.0 35 0.0017816631231366772 0.0 0.0 25.35841123160433 0.0 36 0.0017816631231366772 0.0 0.0 25.816298654250453 0.0 37 0.0017816631231366772 0.0 0.0 26.278343290850565 0.0 38 0.0017816631231366772 0.0 0.0 26.694658573956836 0.0 39 0.0017816631231366772 0.0 0.0 27.166799301588057 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCAACTA 35 1.2085002E-7 45.000004 38 CGACCCA 35 1.2085002E-7 45.000004 15 CGACAGG 35 1.2085002E-7 45.000004 2 CCGACCC 35 1.2085002E-7 45.000004 14 ACAACGA 20 7.026176E-4 45.0 13 CCTTAGT 20 7.026176E-4 45.0 37 GCGACGA 20 7.026176E-4 45.0 5 AGATAGT 25 3.884912E-5 45.0 41 CGGCCTA 20 7.026176E-4 45.0 45 CGATTAT 20 7.026176E-4 45.0 10 CCAGACG 20 7.026176E-4 45.0 21 TCTACGG 20 7.026176E-4 45.0 2 GTTGTCG 20 7.026176E-4 45.0 37 AACGAGC 20 7.026176E-4 45.0 15 GTTCACG 20 7.026176E-4 45.0 1 TTTGCGG 50 2.1827873E-11 45.0 2 CAATGCG 20 7.026176E-4 45.0 1 GGATTAC 20 7.026176E-4 45.0 8 CGGTTGG 30 2.1609158E-6 44.999996 2 GCTACGA 30 2.1609158E-6 44.999996 10 >>END_MODULE