##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935649.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 495598 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.960784748929576 33.0 31.0 34.0 30.0 34.0 2 31.9954095859951 33.0 31.0 34.0 30.0 34.0 3 32.043210424577985 33.0 31.0 34.0 30.0 34.0 4 35.72708122308807 37.0 35.0 37.0 35.0 37.0 5 35.7421720830189 37.0 35.0 37.0 35.0 37.0 6 35.64680446652327 37.0 35.0 37.0 33.0 37.0 7 35.875346551035314 37.0 35.0 37.0 35.0 37.0 8 35.559172958728645 37.0 35.0 37.0 33.0 37.0 9 37.35488642004205 39.0 37.0 39.0 34.0 39.0 10 37.12847913026283 39.0 37.0 39.0 34.0 39.0 11 37.16819075137511 39.0 37.0 39.0 34.0 39.0 12 37.02728622795088 39.0 37.0 39.0 33.0 39.0 13 36.83294928550963 39.0 35.0 39.0 33.0 39.0 14 37.97448738695475 40.0 37.0 41.0 33.0 41.0 15 37.91219698223156 40.0 37.0 41.0 33.0 41.0 16 37.929232967041834 40.0 36.0 41.0 33.0 41.0 17 37.804549251611185 40.0 36.0 41.0 33.0 41.0 18 37.80293907562177 40.0 36.0 41.0 33.0 41.0 19 37.703921323330604 40.0 36.0 41.0 33.0 41.0 20 37.62061792016917 40.0 36.0 41.0 32.0 41.0 21 37.819418157458266 40.0 36.0 41.0 33.0 41.0 22 37.88607702210259 40.0 36.0 41.0 33.0 41.0 23 37.86452931609894 40.0 36.0 41.0 33.0 41.0 24 37.763897352289554 40.0 36.0 41.0 33.0 41.0 25 37.62188104068217 39.0 36.0 41.0 33.0 41.0 26 37.50955411442338 39.0 35.0 41.0 33.0 41.0 27 37.462556346070805 40.0 36.0 41.0 33.0 41.0 28 37.12969180666589 39.0 35.0 41.0 31.0 41.0 29 36.92538912586411 39.0 35.0 41.0 31.0 41.0 30 36.90842578057216 39.0 35.0 41.0 31.0 41.0 31 36.846530857670935 39.0 35.0 41.0 31.0 41.0 32 36.743523985165396 39.0 35.0 41.0 31.0 41.0 33 36.640904523424226 39.0 35.0 41.0 30.0 41.0 34 36.27626826581221 39.0 35.0 41.0 30.0 41.0 35 36.38120008555321 39.0 35.0 41.0 30.0 41.0 36 36.075488601648914 39.0 35.0 41.0 29.0 41.0 37 36.31932332253157 39.0 35.0 41.0 30.0 41.0 38 36.28865330368565 39.0 35.0 41.0 30.0 41.0 39 36.25413339036881 39.0 35.0 41.0 30.0 41.0 40 36.24483351425954 39.0 35.0 41.0 30.0 41.0 41 36.197890225545706 39.0 35.0 41.0 30.0 41.0 42 36.25984971690765 39.0 35.0 41.0 30.0 41.0 43 36.198608549671306 39.0 35.0 41.0 30.0 41.0 44 36.1406543206389 39.0 35.0 41.0 30.0 41.0 45 36.20918365287996 39.0 35.0 40.0 30.0 41.0 46 36.07458464319872 38.0 35.0 40.0 30.0 41.0 47 35.887422870955895 38.0 35.0 40.0 30.0 41.0 48 35.82505780894999 38.0 35.0 40.0 29.0 41.0 49 35.949814163898964 38.0 35.0 40.0 29.0 41.0 50 35.81787658545838 38.0 35.0 40.0 29.0 41.0 51 34.54635208374529 37.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 13.0 10 12.0 11 11.0 12 11.0 13 5.0 14 12.0 15 20.0 16 32.0 17 73.0 18 136.0 19 284.0 20 619.0 21 1290.0 22 2187.0 23 2964.0 24 3394.0 25 3649.0 26 4166.0 27 4522.0 28 5197.0 29 6331.0 30 8348.0 31 10992.0 32 14670.0 33 19629.0 34 32178.0 35 43937.0 36 37676.0 37 56966.0 38 100267.0 39 135920.0 40 80.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 50.34382705337794 16.7627795108132 19.30112712319259 13.592266312616275 2 26.16556160436483 35.48480825184928 22.285804220356013 16.063825923429874 3 27.66758542205578 34.86959188697291 22.838671665341668 14.624151025629645 4 25.597762702835762 20.57272224665959 36.45071206905597 17.378802981448676 5 32.89278810648953 24.85724316885863 22.07293007639256 20.177038648259273 6 21.428052574869145 40.11275267454671 24.403649732242663 14.055545018341478 7 69.49241118810004 5.451595849862187 19.694792957195144 5.361200004842635 8 67.34672052752433 15.02508081146413 11.169334823788635 6.45886383722291 9 62.96776823151021 6.487516091671072 11.62070871956707 18.924006957251642 10 41.33148237079246 19.94116199016138 20.83664582988632 17.890709809159844 11 33.10667113265187 22.48556289573404 23.83262240767719 20.5751435639369 12 26.80902667080981 18.353584962005495 29.51908603343839 25.318302333746303 13 24.41051013119504 22.0317676826783 34.65570886081058 18.902013325316084 14 19.77792485038277 30.80238419041239 26.853215711120708 22.566475248084135 15 16.45587754591423 22.914741383137137 38.76428072752513 21.8651003434235 16 18.265812210703032 24.875403048438454 28.16940342777816 28.689381313080357 17 18.156449380344554 25.08464521648594 31.201296211849122 25.557609191320385 18 18.48695918869729 25.320320098144062 30.14883030197862 26.043890411180026 19 20.683497512096498 26.075771088664602 26.995871654042187 26.244859745196713 20 22.791254201994356 26.099782484997924 31.382289678328 19.72667363467972 21 21.003111392701342 31.327002933829434 28.062865467576543 19.607020205892677 22 19.256938082881693 22.32434352035319 30.404279274734762 28.014439122030353 23 20.56384408330946 28.90810697379731 28.6032227732961 21.924826169597132 24 22.16574723868942 24.42927534009419 26.994257442523985 26.41071997869241 25 18.656653174548726 33.15529925463783 25.471854204415678 22.716193366397768 26 18.13748239500563 25.440780632690203 29.672234351228212 26.749502621075955 27 23.122772892545974 27.497286106885017 25.88347814155828 23.49646285901073 28 17.26076376417984 25.980532609090435 31.99266340864975 24.766040218079976 29 21.232329428286636 25.720644554659224 28.982562480074574 24.06446353697957 30 18.709922154649533 27.675051150327484 32.80683134314505 20.808195351877934 31 22.60360211300288 23.334839930750327 23.797513307156205 30.264044649090593 32 23.241215662694362 26.845144653529672 28.171421192175917 21.742218491600045 33 20.64556354141865 21.200246974362287 27.741839151893267 30.412350332325794 34 20.267838046158378 24.942392826444014 26.59009923365308 28.199669893744527 35 18.463553121683297 21.372362277491032 30.098991521354 30.065093079471666 36 18.924410510131196 26.394577863510342 25.301554889244915 29.379456737113546 37 17.69639909765576 22.148999794188033 35.83468859842049 24.319912509735715 38 18.86529001327689 23.003119463758935 27.159714123140127 30.97187639982405 39 21.1142902110178 22.206707855963906 29.245073628222872 27.43392830479542 40 18.943175719030343 20.798510082768694 32.44706395102482 27.81125024717614 41 17.703461273047914 23.434921044879115 25.02734070758962 33.83427697448335 42 18.75976093527415 21.406664272252915 30.38107498416055 29.452499808312382 43 21.443791137171658 21.27228116336224 26.34070355409021 30.943224145375893 44 20.62155214508533 21.174419590070983 30.904483068938937 27.299545195904745 45 18.816258338411373 20.654038151889235 29.373201667480497 31.156501842218898 46 25.681903478222267 24.23900015738562 26.68029330223286 23.398803062159253 47 17.605397923316882 21.96134770519655 36.17084814708696 24.262406224399612 48 20.72062437701524 23.63730281397423 26.99970540639793 28.6423674026126 49 19.92885362733506 19.365897360360616 34.79957546237071 25.905673549933617 50 22.114697799426146 19.398786920044067 30.415982308241762 28.070532972288024 51 20.09794228386717 20.524497677553178 27.256970367112054 32.120589671467606 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 309.0 1 583.5 2 858.0 3 1460.5 4 2063.0 5 1471.5 6 880.0 7 869.5 8 859.0 9 877.0 10 895.0 11 872.0 12 849.0 13 937.5 14 1026.0 15 979.5 16 933.0 17 974.0 18 1015.0 19 1008.5 20 1002.0 21 1044.0 22 1086.0 23 1426.0 24 1766.0 25 2134.5 26 2919.5 27 3336.0 28 4042.0 29 4748.0 30 5234.5 31 5721.0 32 6285.5 33 6850.0 34 7537.0 35 8224.0 36 9593.5 37 10963.0 38 11860.5 39 12758.0 40 15988.5 41 19219.0 42 21476.5 43 23734.0 44 27265.0 45 30796.0 46 61802.0 47 92808.0 48 72562.5 49 52317.0 50 49852.0 51 47387.0 52 40342.0 53 33297.0 54 29564.5 55 25832.0 56 23932.5 57 22033.0 58 20194.0 59 18355.0 60 17446.5 61 16538.0 62 14233.5 63 11929.0 64 11184.0 65 10439.0 66 8964.0 67 7489.0 68 6067.0 69 4645.0 70 4230.0 71 3815.0 72 3354.5 73 2894.0 74 2401.5 75 1342.5 76 776.0 77 566.5 78 357.0 79 260.5 80 164.0 81 128.5 82 93.0 83 81.5 84 70.0 85 46.0 86 22.0 87 16.5 88 11.0 89 9.5 90 8.0 91 7.5 92 7.0 93 7.5 94 8.0 95 5.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 495598.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.104230112721496 #Duplication Level Percentage of deduplicated Percentage of total 1 73.47896528321967 20.650697487642795 2 10.38246480229099 5.83582359881635 3 3.6353005164217405 3.065019667272356 4 1.8983591084696296 2.1340768488404516 5 1.139372689731311 1.6010596128179597 6 0.7960332360447643 1.3423140745905842 7 0.6285870950664426 1.2366169455944114 8 0.5289547369233127 1.1892692516565473 9 0.47417350028780747 1.1993653048898838 >10 6.78022205257029 42.84096617258604 >50 0.19425442548320931 3.428080636736877 >100 0.05180118012885582 2.6668016702797375 >500 0.00287784334049199 0.5384557470585292 >1k 0.006475147516106977 3.83005210694054 >5k 0.0 0.0 >10k+ 0.0021583825053689927 8.441400874276935 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGC 15274 3.0819333411353558 No Hit GAATCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTC 13409 2.705620280953515 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCG 13065 2.636209185670644 No Hit GCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGC 3624 0.7312378177474486 TruSeq Adapter, Index 13 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCT 2970 0.5992760261340845 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATCTTCCCT 2463 0.49697537116776097 No Hit GAACTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCT 2318 0.46771778740027203 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATCTTCCCTCGTA 1964 0.39628892771964375 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTC 1873 0.3779272717000472 No Hit CCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGC 1595 0.3218334214423787 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGCT 1072 0.21630434343964264 TruSeq Adapter, Index 16 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1063 0.2144883554816605 No Hit GAATGCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTT 865 0.1745366204060549 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATG 709 0.14305949580103228 No Hit TCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGC 551 0.1111788183164581 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCATCTTCCC 538 0.10855572459937289 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.22881448270574134 0.0 2 0.0 0.0 0.0 1.549441281038261 0.0 3 0.0 0.0 0.0 1.9792250977606851 0.0 4 0.0 0.0 0.0 2.9396809510934263 0.0 5 0.0 0.0 0.0 6.907614639284259 0.0 6 0.0 0.0 0.0 7.943938433972695 0.0 7 0.0 0.0 0.0 9.381999120254722 0.0 8 0.0 0.0 0.0 10.908236110718768 0.0 9 0.0 0.0 0.0 11.435074394973345 0.0 10 0.0 0.0 0.0 15.224637710402382 0.0 11 0.0 0.0 0.0 16.531745487269923 0.0 12 0.0 0.0 0.0 20.78922836653901 0.0 13 0.0 0.0 0.0 21.420788623037218 0.0 14 0.0 0.0 0.0 21.698836557048253 0.0 15 0.0 0.0 0.0 22.442786290501576 0.0 16 0.0 0.0 0.0 23.177454307725213 0.0 17 0.0 0.0 0.0 23.91595607730459 0.0 18 0.0 0.0 0.0 24.784401874099572 0.0 19 2.0177643977578602E-4 0.0 0.0 25.814067046275408 0.0 20 2.0177643977578602E-4 0.0 0.0 26.42585321167559 0.0 21 2.0177643977578602E-4 0.0 0.0 26.98820414933071 0.0 22 2.0177643977578602E-4 0.0 0.0 27.649223766036183 0.0 23 2.0177643977578602E-4 0.0 0.0 28.197853905786545 0.0 24 2.0177643977578602E-4 0.0 0.0 28.65346510680027 0.0 25 2.0177643977578602E-4 0.0 0.0 29.039059883211795 0.0 26 2.0177643977578602E-4 0.0 0.0 29.410732085278795 0.0 27 2.0177643977578602E-4 0.0 0.0 29.910734103043193 0.0 28 2.0177643977578602E-4 0.0 0.0 30.28523117526705 0.0 29 2.0177643977578602E-4 0.0 0.0 30.674457927594542 0.0 30 2.0177643977578602E-4 0.0 0.0 31.131481563686698 0.0 31 4.0355287955157204E-4 0.0 0.0 31.53543799611782 0.0 32 4.0355287955157204E-4 0.0 0.0 31.941210416506927 0.0 33 4.0355287955157204E-4 0.0 0.0 32.301179585066926 0.0 34 6.053293193273581E-4 0.0 0.0 32.68516014996025 0.0 35 6.053293193273581E-4 0.0 0.0 33.08124730124012 0.0 36 6.053293193273581E-4 0.0 0.0 33.44726976299339 0.0 37 6.053293193273581E-4 0.0 0.0 33.83165388076627 0.0 38 8.071057591031441E-4 0.0 0.0 34.18012179225905 0.0 39 8.071057591031441E-4 0.0 0.0 34.56934854458654 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 20 7.029397E-4 45.000004 1 ACGCCAA 20 7.029397E-4 45.000004 18 GGTAACC 20 7.029397E-4 45.000004 9 GCACGTC 20 7.029397E-4 45.000004 35 AAGCGTG 20 7.029397E-4 45.000004 1 TAACCTA 20 7.029397E-4 45.000004 11 ACAGCGT 20 7.029397E-4 45.000004 33 AATTCGG 20 7.029397E-4 45.000004 2 ACGTCCC 20 7.029397E-4 45.000004 37 GTATACG 20 7.029397E-4 45.000004 1 TTACGCG 20 7.029397E-4 45.000004 1 TCGACCA 20 7.029397E-4 45.000004 27 CTAAGCG 25 3.8875834E-5 45.0 1 TGCAACG 25 3.8875834E-5 45.0 1 CCGATGA 765 0.0 42.352943 18 TACGGCT 1530 0.0 41.76471 7 GATGAAT 820 0.0 41.707317 20 CGCTATC 65 0.0 41.538464 26 CTCGAAT 65 0.0 41.538464 43 CCCGCTA 60 3.6379788E-12 41.250004 24 >>END_MODULE