##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935647.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 261415 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.946433831264464 33.0 31.0 34.0 30.0 34.0 2 31.96466537880382 33.0 31.0 34.0 30.0 34.0 3 31.991928542738556 33.0 31.0 34.0 30.0 34.0 4 35.70005164202513 37.0 35.0 37.0 35.0 37.0 5 35.72593768528967 37.0 35.0 37.0 35.0 37.0 6 35.66520283839871 37.0 35.0 37.0 35.0 37.0 7 35.91000133886732 37.0 35.0 37.0 35.0 37.0 8 35.639358873821315 37.0 35.0 37.0 33.0 37.0 9 37.45277432435017 39.0 37.0 39.0 35.0 39.0 10 37.15419161103992 39.0 37.0 39.0 34.0 39.0 11 37.15065700131974 39.0 37.0 39.0 34.0 39.0 12 36.95708738978253 39.0 35.0 39.0 33.0 39.0 13 36.702802058030336 39.0 35.0 39.0 33.0 39.0 14 37.81359906661821 40.0 36.0 41.0 33.0 41.0 15 37.8105502744678 40.0 36.0 41.0 33.0 41.0 16 37.851523439741406 40.0 36.0 41.0 33.0 41.0 17 37.774936403802386 40.0 36.0 41.0 33.0 41.0 18 37.77495935581355 39.0 36.0 41.0 33.0 41.0 19 37.627477382705656 39.0 36.0 41.0 33.0 41.0 20 37.62923703689536 39.0 35.0 41.0 33.0 41.0 21 37.76799724575866 39.0 36.0 41.0 33.0 41.0 22 37.87020637683377 40.0 36.0 41.0 33.0 41.0 23 37.855077176137556 40.0 36.0 41.0 34.0 41.0 24 37.78508501807471 40.0 35.0 41.0 33.0 41.0 25 37.666044412141616 39.0 35.0 41.0 33.0 41.0 26 37.64354761585984 39.0 35.0 41.0 33.0 41.0 27 37.63507832373812 40.0 35.0 41.0 33.0 41.0 28 37.50834114339269 39.0 35.0 41.0 33.0 41.0 29 37.47211904443127 39.0 35.0 41.0 33.0 41.0 30 37.38804965285083 39.0 36.0 41.0 33.0 41.0 31 37.302082895013676 39.0 35.0 41.0 33.0 41.0 32 37.19610580877149 39.0 35.0 41.0 33.0 41.0 33 37.08669357152421 39.0 35.0 41.0 32.0 41.0 34 36.952894822408815 39.0 35.0 41.0 32.0 41.0 35 36.91466824780522 39.0 35.0 41.0 32.0 41.0 36 36.734797161601286 39.0 35.0 41.0 31.0 41.0 37 36.761846106765105 39.0 35.0 41.0 31.0 41.0 38 36.51881491115659 39.0 35.0 41.0 30.0 41.0 39 36.649373601361816 39.0 35.0 41.0 31.0 41.0 40 36.46311803071744 39.0 35.0 41.0 30.0 41.0 41 36.375311286651495 39.0 35.0 41.0 30.0 41.0 42 36.385318363521606 39.0 35.0 41.0 30.0 41.0 43 36.42214486544383 39.0 35.0 41.0 31.0 41.0 44 36.396297075531244 39.0 35.0 40.0 31.0 41.0 45 36.438716217508556 39.0 35.0 40.0 31.0 41.0 46 36.37892622841076 39.0 35.0 40.0 31.0 41.0 47 36.19566589522407 38.0 35.0 40.0 30.0 41.0 48 36.175839182908405 38.0 35.0 40.0 30.0 41.0 49 36.18115257349425 38.0 35.0 40.0 30.0 41.0 50 36.01741675114282 38.0 35.0 40.0 30.0 41.0 51 34.685530669624924 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 8.0 11 4.0 12 8.0 13 0.0 14 6.0 15 9.0 16 11.0 17 21.0 18 78.0 19 168.0 20 355.0 21 618.0 22 800.0 23 1064.0 24 1325.0 25 1681.0 26 2002.0 27 2317.0 28 2498.0 29 2901.0 30 3830.0 31 5373.0 32 7292.0 33 10126.0 34 18138.0 35 26565.0 36 18524.0 37 26366.0 38 50244.0 39 79023.0 40 54.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.615802459690535 17.453091827171356 20.22454717594629 13.706558537191821 2 26.793030239274717 33.8415928695752 22.9168180861848 16.448558804965284 3 26.589139873381406 34.07073044775549 24.718550963028136 14.621578715834977 4 25.190979859610195 22.263833368398906 35.79480902014039 16.750377751850507 5 30.46611709351032 26.318306141575654 24.536847541265804 18.678729223648222 6 21.280339689765317 39.036015530860894 24.93276973394794 14.750875045425854 7 70.62639863818066 5.583841784136335 18.94918042193447 4.8405791557485225 8 69.34529388137636 13.369546506512634 10.759520302966548 6.525639309144464 9 65.04561712220033 6.049002543847905 12.298452651913625 16.60692768203814 10 41.16060669816193 21.21339632385288 21.148365625537938 16.477631352447258 11 33.363808503720136 24.25032993516057 23.93741751620986 18.448444044909433 12 27.354971979419695 19.98852399441501 29.52278943442419 23.1337145917411 13 23.606526021842665 25.591874988045827 34.71797716274889 16.083621827362624 14 18.570089704110323 33.02832660711895 26.970143258803052 21.431440429967676 15 15.204177266032936 23.7824914408125 42.587839259415105 18.425492033739456 16 16.73469387755102 24.347110915593976 31.542183883862823 27.376011322992177 17 17.312702025514987 24.533022206070807 31.352064724671497 26.80221104374271 18 19.51992043302794 25.065126331694813 31.7896830709791 23.625270164298147 19 20.267008396610752 27.276935141441772 28.093644205573515 24.362412256373965 20 22.318153128167857 25.145840904309242 33.19472868810129 19.34127727942161 21 20.74441022894631 31.1344031520762 28.27190482566035 19.84928179331714 22 17.800814796396534 24.977143622209898 30.344471434309433 26.87757014708414 23 17.33794923780196 30.523497121435266 29.05265573895913 23.085897901803644 24 21.01715662834956 24.202130711703614 28.650230476445497 26.13048218350133 25 16.06832048658264 32.821375973069635 27.235238987816306 23.875064552531416 26 16.977220128913796 28.060363789377046 30.645525314155652 24.316890767553506 27 21.757358988581373 29.22250062161697 26.77428609681923 22.245854292982422 28 16.041543140217662 27.18780483139835 35.51594208442515 21.254709943958837 29 21.442533902033166 26.11709351031884 29.2970946579194 23.143277929728594 30 21.060765449572518 29.82881625002391 29.68727884780904 19.423139452594533 31 24.40602107759692 25.365797678021533 26.974351127517547 23.25383011686399 32 27.880955568731707 29.384312300365316 24.76407245184859 17.970659679054375 33 24.859323298204007 26.50153969741599 24.448864831780885 24.190272172599123 34 25.657288219880265 26.668706845437328 27.28764607998776 20.38635885469464 35 23.98867700782281 24.200600577625615 28.903850199873766 22.90687221467781 36 26.903199892890616 27.21113937608783 28.328137253026796 17.55752347799476 37 28.671652353537482 23.25383011686399 30.438574680106345 17.635942849492185 38 21.409636019356196 28.57793164126007 27.74286096819234 22.2695713711914 39 30.00937207122774 24.026547826253275 27.462463898399097 18.501616204119887 40 23.229730505135514 26.324809211407153 30.531912858864256 19.91354742459308 41 26.078840158368877 23.86703134862192 26.18441940975078 23.86970908325842 42 23.238911309603505 22.135302105847025 33.53288831933898 21.09289826521049 43 28.73591798481342 22.63756861695006 26.22496796281774 22.40154543541878 44 23.73926515310904 23.880037488284913 29.17774419983551 23.202953158770537 45 20.860317885354704 23.052617485607175 28.4352466384867 27.651817990551418 46 28.656733546276993 25.764397605340168 26.58454947114741 18.99431937723543 47 20.16257674578735 23.608821222959662 35.28986477440086 20.938737256852132 48 24.481762714457854 23.323833750932426 28.087141135742023 24.1072623988677 49 22.014804047204635 19.962129181569534 35.136086299561995 22.88698047166383 50 24.126389074842685 21.355316259587244 30.007841937149742 24.51045272842033 51 21.322418376910278 22.567182449362125 26.44415966949104 29.666239504236557 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 297.0 1 346.5 2 396.0 3 739.5 4 1083.0 5 747.0 6 411.0 7 455.5 8 500.0 9 531.5 10 563.0 11 638.0 12 713.0 13 674.0 14 635.0 15 624.5 16 614.0 17 605.5 18 597.0 19 563.0 20 529.0 21 677.5 22 826.0 23 981.5 24 1137.0 25 1204.5 26 1538.5 27 1805.0 28 2131.0 29 2457.0 30 2716.0 31 2975.0 32 3616.5 33 4258.0 34 4883.0 35 5508.0 36 5788.0 37 6068.0 38 7128.0 39 8188.0 40 9495.5 41 10803.0 42 12903.0 43 15003.0 44 17645.5 45 20288.0 46 34510.5 47 48733.0 48 39725.0 49 30717.0 50 29641.0 51 28565.0 52 23981.5 53 19398.0 54 16377.0 55 13356.0 56 11432.5 57 9509.0 58 8368.0 59 7227.0 60 6785.5 61 6344.0 62 5300.0 63 4256.0 64 3347.5 65 2439.0 66 1870.5 67 1302.0 68 1142.0 69 982.0 70 800.5 71 619.0 72 534.0 73 449.0 74 349.0 75 190.0 76 131.0 77 111.0 78 91.0 79 66.5 80 42.0 81 42.5 82 43.0 83 37.0 84 31.0 85 17.0 86 3.0 87 2.0 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 261415.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.99592601801733 #Duplication Level Percentage of deduplicated Percentage of total 1 74.05835019993089 22.955071438134766 2 11.06037419163746 6.856530803511658 3 3.8813743397344127 3.6092037564791615 4 1.8697240460087872 2.3181531281678556 5 1.0885126129239275 1.6869728209934396 6 0.7503579009725033 1.3954822791347092 7 0.6392851853680209 1.3870665417057169 8 0.47144197067680305 1.1690224355909187 9 0.38381793947771137 1.0707113210795096 >10 5.500567704990867 38.612933458294286 >50 0.23818926790739003 4.59499263622975 >100 0.04319494495729871 2.5985501979610963 >500 0.004936565137976996 1.2233421953598684 >1k 0.006170706422471244 2.9493334353422718 >5k 0.0037024238534827465 7.572633552014995 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGC 7369 2.8188895051928924 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCG 7016 2.6838551728095172 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTC 5411 2.0698888740125856 No Hit GCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGC 2315 0.8855650976416808 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCT 1427 0.545875332325995 No Hit CCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGC 1415 0.5412849300919993 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTGAGTGT 1412 0.5401373295335004 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTA 1141 0.4364707457490962 No Hit GAACTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCT 942 0.36034657536866666 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTC 872 0.33356922900369146 No Hit CTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGCT 774 0.2960809440927261 TruSeq Adapter, Index 15 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 610 0.23334544689478415 No Hit TCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGC 495 0.18935409215232485 No Hit AATGAAGATGGAAGTAGAAGCAATAAAAATAAAACACAAGCCGAGCATGGT 425 0.16257674578734962 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCC 400 0.15301340779985848 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATG 340 0.1300613966298797 No Hit ACTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGC 333 0.12738366199338216 TruSeq Adapter, Index 15 (95% over 22bp) GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 306 0.11705525696689173 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAGTGAGTG 296 0.11322992177189527 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTAT 293 0.11208232121339631 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTT 275 0.1051967178624027 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGT 263 0.10060631562840694 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.31291241895071054 0.0 2 0.0 0.0 0.0 2.1551938488610065 0.0 3 0.0 0.0 0.0 2.704894516381998 0.0 4 0.0 0.0 0.0 3.6891532620545875 0.0 5 0.0 0.0 0.0 7.314040892833234 0.0 6 0.0 0.0 0.0 8.385517280951744 0.0 7 0.0 0.0 0.0 9.812367308685424 0.0 8 0.0 0.0 0.0 11.543331484421323 0.0 9 0.0 0.0 0.0 12.145056710594266 0.0 10 0.0 0.0 0.0 16.049958877646652 0.0 11 0.0 0.0 0.0 17.618346307595203 0.0 12 0.0 0.0 0.0 21.773807929919858 0.0 13 0.0 0.0 0.0 22.514010290151674 0.0 14 0.0 0.0 0.0 22.848344586194365 0.0 15 0.0 0.0 0.0 23.661228315131112 0.0 16 0.0 0.0 0.0 24.559034485396783 0.0 17 0.0 0.0 0.0 25.61329686513781 0.0 18 0.0 0.0 0.0 26.837786661056175 0.0 19 0.0 0.0 0.0 28.06457165809154 0.0 20 0.0 0.0 0.0 28.80936442055735 0.0 21 0.0 0.0 0.0 29.53809077520418 0.0 22 0.0 0.0 0.0 30.359772775089418 0.0 23 0.0 0.0 0.0 31.09155939789224 0.0 24 0.0 0.0 0.0 31.66765487825871 0.0 25 0.0 0.0 0.0 32.14276150947727 0.0 26 0.0 0.0 0.0 32.618250674215325 0.0 27 3.8253351949964616E-4 0.0 0.0 33.16527360709982 0.0 28 3.8253351949964616E-4 0.0 0.0 33.636172369603884 0.0 29 7.650670389992923E-4 0.0 0.0 34.104775930990954 0.0 30 7.650670389992923E-4 0.0 0.0 34.73748637224337 0.0 31 7.650670389992923E-4 0.0 0.0 35.27073809842587 0.0 32 7.650670389992923E-4 0.0 0.0 35.72595298663045 0.0 33 7.650670389992923E-4 0.0 0.0 36.217891092707 0.0 34 7.650670389992923E-4 0.0 0.0 36.65627450605359 0.0 35 0.0011476005584989384 0.0 0.0 37.17498995849511 0.0 36 0.0015301340779985846 0.0 0.0 37.650479123233175 0.0 37 0.0015301340779985846 0.0 0.0 38.10225120976226 0.0 38 0.0015301340779985846 0.0 0.0 38.580800642656314 0.0 39 0.0015301340779985846 0.0 0.0 39.044431268289884 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTGC 20 7.023277E-4 45.000004 6 CGGGTGA 30 2.1590458E-6 45.000004 6 GAGTGCG 20 7.023277E-4 45.000004 1 GTCGAAT 30 2.1590458E-6 45.000004 43 GGTAACG 20 7.023277E-4 45.000004 1 ACGCACG 20 7.023277E-4 45.000004 1 TGGACCA 20 7.023277E-4 45.000004 22 GGCGTAG 20 7.023277E-4 45.000004 1 GGCAACG 20 7.023277E-4 45.000004 1 ATAGCGG 35 1.2071177E-7 45.000004 2 CGCGAGG 20 7.023277E-4 45.000004 2 ATCACGC 20 7.023277E-4 45.000004 11 AGAACGA 20 7.023277E-4 45.000004 32 CCGTCGA 20 7.023277E-4 45.000004 41 ACGGCTA 20 7.023277E-4 45.000004 30 CTAGTAG 20 7.023277E-4 45.000004 1 GTGTCCA 35 1.2071177E-7 45.000004 9 TCTCGCG 20 7.023277E-4 45.000004 32 AGTCTTC 20 7.023277E-4 45.000004 11 GTCGTAA 20 7.023277E-4 45.000004 15 >>END_MODULE