##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935645.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 289194 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.913269293277178 33.0 31.0 34.0 30.0 34.0 2 31.9589479726412 33.0 31.0 34.0 30.0 34.0 3 31.9949826068314 33.0 31.0 34.0 30.0 34.0 4 35.70859699717145 37.0 35.0 37.0 35.0 37.0 5 35.68616568808481 37.0 35.0 37.0 35.0 37.0 6 35.59036840321722 37.0 35.0 37.0 33.0 37.0 7 35.77482935330608 37.0 35.0 37.0 35.0 37.0 8 35.43107049247218 37.0 35.0 37.0 33.0 37.0 9 37.14613027932806 39.0 37.0 39.0 34.0 39.0 10 37.02361390623595 39.0 37.0 39.0 33.0 39.0 11 37.04292965967482 39.0 37.0 39.0 33.0 39.0 12 36.829833952295 39.0 35.0 39.0 33.0 39.0 13 36.53670546415209 39.0 35.0 39.0 32.0 39.0 14 37.67611361231561 40.0 36.0 41.0 32.0 41.0 15 37.58670304363161 40.0 36.0 41.0 32.0 41.0 16 37.731215032123764 40.0 36.0 41.0 33.0 41.0 17 37.46454974861166 39.0 35.0 41.0 32.0 41.0 18 37.52560564880323 39.0 36.0 41.0 33.0 41.0 19 37.389606976631605 39.0 36.0 41.0 32.0 41.0 20 37.034658395402396 39.0 35.0 41.0 31.0 41.0 21 37.44396840874984 39.0 35.0 41.0 32.0 41.0 22 37.38575834906672 39.0 35.0 41.0 32.0 41.0 23 37.26986037054711 39.0 35.0 41.0 32.0 41.0 24 37.2693900979965 39.0 35.0 41.0 32.0 41.0 25 37.3430776572128 39.0 35.0 41.0 33.0 41.0 26 37.14458806199299 39.0 35.0 41.0 32.0 41.0 27 36.996334640414396 39.0 35.0 41.0 31.0 41.0 28 36.818744510605335 39.0 35.0 41.0 31.0 41.0 29 36.832257930662465 39.0 35.0 41.0 31.0 41.0 30 36.74422014287987 39.0 35.0 41.0 31.0 41.0 31 36.807793384371735 39.0 35.0 41.0 31.0 41.0 32 36.44356037815446 39.0 35.0 41.0 30.0 41.0 33 36.34401474442762 39.0 35.0 41.0 30.0 41.0 34 36.159837341023675 39.0 35.0 41.0 30.0 41.0 35 36.12122312357794 39.0 35.0 41.0 30.0 41.0 36 36.06212438708963 39.0 35.0 41.0 29.0 41.0 37 35.94858468709586 39.0 35.0 41.0 28.0 41.0 38 35.74788204457907 39.0 35.0 41.0 27.0 41.0 39 35.768608615669756 39.0 35.0 41.0 28.0 41.0 40 35.602716515557034 39.0 35.0 41.0 26.0 41.0 41 35.47499948131704 38.0 35.0 41.0 26.0 41.0 42 35.704665380332926 39.0 35.0 41.0 27.0 41.0 43 35.53744199395562 38.0 35.0 41.0 26.0 41.0 44 35.56823447236111 39.0 35.0 40.0 26.0 41.0 45 35.6932128605711 38.0 35.0 40.0 27.0 41.0 46 35.53919168447478 38.0 35.0 40.0 27.0 41.0 47 35.273857687227256 38.0 35.0 40.0 27.0 41.0 48 35.30571865253083 38.0 35.0 40.0 26.0 41.0 49 35.31711238822382 38.0 35.0 40.0 26.0 41.0 50 35.16789767422561 38.0 35.0 40.0 26.0 41.0 51 34.00398694302095 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 4.0 10 7.0 11 6.0 12 2.0 13 3.0 14 3.0 15 10.0 16 20.0 17 53.0 18 128.0 19 335.0 20 690.0 21 1548.0 22 2367.0 23 2859.0 24 3041.0 25 3230.0 26 3284.0 27 3298.0 28 3318.0 29 3656.0 30 4419.0 31 5954.0 32 8312.0 33 11461.0 34 19930.0 35 28034.0 36 20503.0 37 28317.0 38 48357.0 39 85989.0 40 52.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 50.92671355560627 15.004806462098108 20.409482907667517 13.658997074628104 2 24.39538856269494 39.71140480092948 21.366625863607126 14.526580772768453 3 24.414406937903276 38.25840093501248 23.89192030263422 13.435271824450023 4 24.956949314301127 20.250420133197782 38.57894700443301 16.21368354806808 5 35.0515570862466 25.191739800964058 20.943034779421428 18.81366833336791 6 20.769448882065326 44.14199464719185 22.916450548766573 12.17210592197625 7 64.67526988803364 7.1989736993160305 23.582439469698542 4.54331694295179 8 62.64307004986273 20.938885315739608 10.87401536684717 5.544029267550502 9 59.06242868109297 6.164374087982462 11.251616561892709 23.52158066903186 10 44.413784518351 20.302980006500825 20.281886899451578 15.001348575696591 11 37.09897162458419 21.858337309902694 22.9327026148537 18.10998845065942 12 26.752975511248504 17.439158488765326 29.628208054109006 26.17965794587716 13 27.145099829180413 22.261872652959607 34.394904458598724 16.198123059261256 14 19.39044378514077 33.35753853814394 24.87361425202459 22.378403424690692 15 14.729904493177589 22.217957495660354 40.26086295013036 22.791275061031698 16 16.04701342351501 23.4213019633879 28.169671569949585 32.362013043147506 17 16.908372926132632 25.686217556380836 32.58608408196574 24.819325435520792 18 19.28186615213317 22.528475694516484 29.133038721411925 29.056619431938422 19 21.597266886588244 25.07486324059282 24.982537673672343 28.345332199146593 20 25.290981140687567 23.55546795576672 33.40422000456441 17.749330898981306 21 22.912301085084753 32.83505190287489 26.006072048521062 18.2465749635193 22 19.368659100811218 20.956174747747188 33.10718756267419 26.5679785887674 23 21.454801966845785 30.340532652821288 27.337358313104698 20.86730706722823 24 21.949279722262563 24.734607218683653 25.19658084192618 28.119532217127603 25 18.47272073417844 34.21820646348126 26.336645988505985 20.97242681383431 26 18.806406771924728 22.201705429573227 31.893123647101945 27.0987641514001 27 26.486372469691627 26.33076758162341 23.39536781537653 23.787492133308437 28 17.2821704461365 26.666874139850762 34.93018527355339 21.120770140459346 29 23.49115126869852 19.584085423625663 32.90524699682566 24.019516310850157 30 22.58380187694074 30.069088570302288 27.785154602101013 19.56195495065596 31 26.26403037407415 23.794407906111466 22.95033783550143 26.991223884312955 32 27.240883282502402 27.794836684025253 21.74146074953146 23.222819283940886 33 24.62153433335408 26.19383528012338 20.57476987765998 28.60986050886256 34 22.115258269535328 23.54094483288035 30.50996908649557 23.83382781108875 35 23.494263366459887 22.814788688562004 24.2249147631002 29.46603318187791 36 24.004301610683484 28.42901305006328 26.83700215080534 20.729683188447893 37 24.076225647835017 22.070651534955772 29.627170688188553 24.22595212902066 38 23.500833350622766 28.07285075070714 22.376674481489932 26.049641417180165 39 21.6204347254784 24.082104054717597 27.49987897397595 26.79758224582806 40 19.8738563040727 25.22873918546028 28.391322088286756 26.506082422180267 41 17.946430423867714 27.464608532680483 28.301071253207187 26.287889790244613 42 19.58996383050824 22.44998167320207 28.764773819650475 29.195280676639214 43 22.370450285967205 26.761274438612144 26.28062822880143 24.587647046619225 44 24.54165715747906 22.283657337289156 29.32944666901803 23.845238836213753 45 21.428176241554112 22.736640455887745 25.710768549831602 30.12441475272654 46 27.686604839657807 26.550343368119673 23.255323416115132 22.507728376107387 47 17.45056951389033 24.994986064717803 36.60103598276589 20.953408438625974 48 22.391889181656605 24.677552093058637 25.582826752975514 27.347731972309248 49 20.569928836697855 19.51146980919383 34.633844408943474 25.284756945164837 50 22.287806800970973 22.555101419808157 29.28345677987787 25.873634999343004 51 19.74003610033403 22.693416875868795 26.47703617640753 31.08951084738964 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 517.0 1 581.5 2 646.0 3 1058.5 4 1471.0 5 1068.5 6 666.0 7 683.0 8 700.0 9 690.0 10 680.0 11 687.0 12 694.0 13 712.0 14 730.0 15 713.5 16 697.0 17 694.5 18 692.0 19 623.0 20 554.0 21 661.5 22 769.0 23 863.0 24 957.0 25 1153.0 26 1426.5 27 1504.0 28 1807.0 29 2110.0 30 2426.0 31 2742.0 32 3110.5 33 3479.0 34 4524.5 35 5570.0 36 5975.5 37 6381.0 38 6912.5 39 7444.0 40 8863.0 41 10282.0 42 12321.5 43 14361.0 44 16280.0 45 18199.0 46 36846.5 47 55494.0 48 43032.5 49 30571.0 50 28352.0 51 26133.0 52 22160.0 53 18187.0 54 16709.0 55 15231.0 56 14361.0 57 13491.0 58 12531.0 59 11571.0 60 10949.0 61 10327.0 62 9793.5 63 9260.0 64 7579.5 65 5899.0 66 4621.5 67 3344.0 68 2872.5 69 2401.0 70 2175.0 71 1949.0 72 1502.0 73 1055.0 74 743.0 75 372.0 76 313.0 77 268.5 78 224.0 79 129.5 80 35.0 81 48.5 82 62.0 83 35.0 84 8.0 85 9.5 86 11.0 87 6.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 289194.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.565903856926493 #Duplication Level Percentage of deduplicated Percentage of total 1 77.07446600804406 20.475528537936473 2 8.593333073008187 4.565793204561644 3 2.77246280604475 2.2095894105686837 4 1.3693102685253882 1.4550785977579064 5 0.9723144207114686 1.2915205709662025 6 0.7171957775261301 1.143177244341169 7 0.5883348302029234 1.0940752574396426 8 0.5024275319874524 1.0677953207881214 9 0.4256316138857433 1.0176559679661403 >10 6.463873377848933 40.01950247930455 >50 0.45687063141864187 7.446212577024419 >100 0.044255274838273004 2.3216249299778005 >500 0.0065081286526872065 1.0626084911858475 >1k 0.009111380113762089 5.013935282198109 >5k 0.0026032514610748823 6.084842700747595 >10k+ 0.0013016257305374411 3.7310594272356967 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGC 10790 3.7310594272356967 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCG 9552 3.302973090728024 No Hit GAATCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTC 8045 2.7818696100195717 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 3884 1.34304307834879 No Hit GCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC 2216 0.7662676265759317 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGGCATCAT 2040 0.7054088259092512 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCT 1829 0.632447422837265 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGGCATCATCGTA 1640 0.5670933698486137 No Hit GAACTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCT 1449 0.5010477395796593 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTC 1442 0.49862721909859814 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 712 0.24620151178793476 No Hit CCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC 699 0.24170625946596402 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTT 570 0.19709952488640844 No Hit GGCAAGGTGGGGTGAGGCCCGGAGTTGGGGAAGCTAGGAGGCTTAAAGCCT 564 0.19502479304549886 No Hit CTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGCT 528 0.1825764020000415 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATG 491 0.16978222231443252 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTGGCATCATCGTAT 434 0.1500722698257917 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTGGCATCA 403 0.13935282198109228 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTGGCATCATCGT 365 0.12621285365533172 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0010373659204547811 0.0 0.0 0.18983796344322496 0.0 2 0.0010373659204547811 0.0 0.0 1.3748556332427366 0.0 3 0.0010373659204547811 0.0 0.0 1.6303934383147645 0.0 4 0.0010373659204547811 0.0 0.0 2.4094552445763053 0.0 5 0.0010373659204547811 0.0 0.0 5.95793826981196 0.0 6 0.0010373659204547811 0.0 0.0 6.62185245890302 0.0 7 0.0010373659204547811 0.0 0.0 7.693451454732809 0.0 8 0.001383154560606375 0.0 0.0 8.867058099407318 0.0 9 0.001383154560606375 0.0 0.0 9.142305856967987 0.0 10 0.001383154560606375 0.0 0.0 13.021362822188566 0.0 11 0.001383154560606375 0.0 0.0 13.783480985082678 0.0 12 0.001383154560606375 0.0 0.0 18.337517375879166 0.0 13 0.001383154560606375 0.0 0.0 18.901498647966417 0.0 14 0.001383154560606375 0.0 0.0 19.2445209789968 0.0 15 0.001383154560606375 0.0 0.0 20.052974819671224 0.0 16 0.001383154560606375 0.0 0.0 20.6010498143115 0.0 17 0.001383154560606375 0.0 0.0 21.117658042697983 0.0 18 0.001383154560606375 0.0 0.0 21.755983872417822 0.0 19 0.001383154560606375 0.0 0.0 22.893282709876416 0.0 20 0.001383154560606375 0.0 0.0 23.386377310732588 0.0 21 0.001383154560606375 0.0 0.0 23.748072228331154 0.0 22 0.001383154560606375 0.0 0.0 24.26986728631991 0.0 23 0.001383154560606375 0.0 0.0 24.628450106157114 0.0 24 0.001383154560606375 0.0 0.0 24.93412726405112 0.0 25 0.001383154560606375 0.0 0.0 25.230468128661037 0.0 26 0.001383154560606375 0.0 0.0 25.484622779172458 0.0 27 0.001383154560606375 0.0 0.0 25.905447554236947 0.0 28 0.0017289432007579688 0.0 0.0 26.195910011964287 0.0 29 0.0017289432007579688 0.0 0.0 26.46389620808177 0.0 30 0.0017289432007579688 0.0 0.0 26.824899548400037 0.0 31 0.0017289432007579688 0.0 0.0 27.08424102851373 0.0 32 0.0017289432007579688 0.0 0.0 27.33390042670318 0.0 33 0.0017289432007579688 0.0 0.0 27.60914818426385 0.0 34 0.0017289432007579688 0.0 0.0 27.90030221927149 0.0 35 0.0017289432007579688 0.0 0.0 28.200446758923075 0.0 36 0.0017289432007579688 0.0 0.0 28.489180273449655 0.0 37 0.0017289432007579688 0.0 0.0 28.75025069676411 0.0 38 0.0020747318409095623 0.0 0.0 29.031376861207356 0.0 39 0.0020747318409095623 0.0 0.0 29.33152140085894 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTGATC 30 2.159848E-6 45.000004 16 CATGCGG 30 2.159848E-6 45.000004 2 GCGAACC 70 0.0 45.000004 33 TCGGGCA 35 1.207718E-7 45.000004 5 GTAGGGT 35 1.207718E-7 45.000004 4 TATTGCG 30 2.159848E-6 45.000004 1 TTATACG 30 2.159848E-6 45.000004 26 CTTTGAT 35 1.207718E-7 45.000004 41 TTCGGAC 35 1.207718E-7 45.000004 13 ATACGGT 30 2.159848E-6 45.000004 28 TGGTCTT 30 2.159848E-6 45.000004 16 CAAACGA 25 3.883541E-5 45.0 15 ATTAGCG 25 3.883541E-5 45.0 1 TGCCACG 20 7.0245203E-4 45.0 40 GCGAATT 20 7.0245203E-4 45.0 17 GCGAATC 20 7.0245203E-4 45.0 38 TTAGCGG 55 1.8189894E-12 45.0 2 TCTTCGT 20 7.0245203E-4 45.0 23 TATGGGC 40 6.7848305E-9 45.0 4 GCACGGT 25 3.883541E-5 45.0 3 >>END_MODULE