##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935640.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 246489 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.970221794887397 33.0 31.0 34.0 30.0 34.0 2 31.991180133799073 33.0 31.0 34.0 30.0 34.0 3 32.0140817642978 33.0 31.0 34.0 30.0 34.0 4 35.699025108625534 37.0 35.0 37.0 33.0 37.0 5 35.76763263269355 37.0 35.0 37.0 35.0 37.0 6 35.714883828487274 37.0 35.0 37.0 35.0 37.0 7 36.0003813557603 37.0 35.0 37.0 35.0 37.0 8 35.75299506266 37.0 35.0 37.0 35.0 37.0 9 37.572759839181465 39.0 37.0 39.0 35.0 39.0 10 37.20964018678318 39.0 37.0 39.0 34.0 39.0 11 37.226034427499805 39.0 37.0 39.0 34.0 39.0 12 37.05474483648358 39.0 37.0 39.0 34.0 39.0 13 36.86986031831035 39.0 35.0 39.0 33.0 39.0 14 37.9507604801837 40.0 37.0 41.0 33.0 41.0 15 38.022828604927604 40.0 37.0 41.0 33.0 41.0 16 37.920458925144736 40.0 36.0 41.0 33.0 41.0 17 37.93044314350742 40.0 36.0 41.0 33.0 41.0 18 37.88192982242615 40.0 36.0 41.0 33.0 41.0 19 37.772440149459 39.0 36.0 41.0 33.0 41.0 20 37.863754569169416 40.0 36.0 41.0 34.0 41.0 21 37.870192990356564 40.0 36.0 41.0 34.0 41.0 22 37.97419763153731 40.0 36.0 41.0 34.0 41.0 23 38.008685985987206 40.0 36.0 41.0 34.0 41.0 24 37.90916836045422 40.0 36.0 41.0 34.0 41.0 25 37.7415341049702 39.0 35.0 41.0 33.0 41.0 26 37.80291615447342 40.0 36.0 41.0 34.0 41.0 27 37.79049369343054 40.0 36.0 41.0 34.0 41.0 28 37.634393421207434 40.0 36.0 41.0 33.0 41.0 29 37.644933445305874 40.0 36.0 41.0 33.0 41.0 30 37.52739067463457 40.0 36.0 41.0 33.0 41.0 31 37.411766853693265 39.0 35.0 41.0 33.0 41.0 32 37.3625679036387 40.0 35.0 41.0 33.0 41.0 33 37.30052862399539 40.0 35.0 41.0 33.0 41.0 34 37.239122232635125 40.0 35.0 41.0 33.0 41.0 35 37.18051109785832 40.0 35.0 41.0 32.0 41.0 36 37.000434096450554 39.0 35.0 41.0 31.0 41.0 37 36.99417012523885 39.0 35.0 41.0 32.0 41.0 38 36.79642093561984 39.0 35.0 41.0 31.0 41.0 39 36.88293189554098 39.0 35.0 41.0 31.0 41.0 40 36.80643355281575 39.0 35.0 41.0 31.0 41.0 41 36.628989528944494 39.0 35.0 41.0 31.0 41.0 42 36.73574479997079 39.0 35.0 41.0 31.0 41.0 43 36.678046484833 39.0 35.0 41.0 31.0 41.0 44 36.6037673080746 39.0 35.0 41.0 31.0 41.0 45 36.598152453050645 39.0 35.0 41.0 31.0 41.0 46 36.49428980603597 39.0 35.0 41.0 31.0 41.0 47 36.366032561290766 39.0 35.0 41.0 31.0 41.0 48 36.30022029380621 39.0 35.0 40.0 31.0 41.0 49 36.3352887958489 39.0 35.0 40.0 31.0 41.0 50 36.16832394143349 39.0 35.0 40.0 30.0 41.0 51 35.0698286738962 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 1.0 9 6.0 10 5.0 11 3.0 12 6.0 13 6.0 14 6.0 15 10.0 16 12.0 17 22.0 18 53.0 19 103.0 20 217.0 21 407.0 22 665.0 23 825.0 24 1114.0 25 1447.0 26 1884.0 27 2145.0 28 2444.0 29 2861.0 30 3552.0 31 4731.0 32 6343.0 33 8772.0 34 16459.0 35 23654.0 36 16335.0 37 24411.0 38 47562.0 39 80385.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.5703459383583 18.1375233783252 23.467578674910442 13.824552008406055 2 28.034922450900446 30.379043283878794 24.491153763453948 17.094880501766813 3 28.50796587271643 29.127060436774055 25.814133693592815 16.550839996916697 4 25.639278020520184 24.445715630312105 32.81769166169687 17.097314687470842 5 27.337933944313946 27.002016317158166 26.320038622413172 19.340011116114713 6 23.466767279675764 36.7407876213543 25.472536299794314 14.319908799175623 7 74.41508546020309 5.477323531678898 14.910604530019594 5.196986478098414 8 74.00249098337045 9.938780229543712 9.96231069134931 6.0964180957365235 9 69.1519702704786 7.084291793954294 11.729935210090511 12.033802725476592 10 38.78590931035462 24.38283249962473 20.666642324809626 16.164615865211022 11 31.813184361168247 26.2989423463116 24.557282475080026 17.33059081744013 12 28.48118982997213 20.94292240221673 29.483262944796724 21.092624823014415 13 22.745031218431656 27.3395567347833 31.438319762748034 18.477092284037017 14 18.82883211826897 31.943413296333713 28.463339134809264 20.764415450588057 15 16.260360502902767 25.240882960294375 40.60749161220176 17.891264924601096 16 18.371610903529163 25.084689377619284 32.954006061122406 23.58969365772915 17 18.572836921728758 25.531362454308304 30.052051004304452 25.843749619658485 18 20.412675616356104 25.67497941084592 31.673218683186672 22.239126289611303 19 20.579011639464643 27.648292621577436 28.63900620311657 23.133689535841356 20 23.686655388272904 27.013781548060965 30.456531528790332 18.843031534875795 21 20.9104665928297 29.992819152173116 29.666232570216117 19.430481684781064 22 18.659656211839067 25.313908531415198 30.22568958452507 25.800745672220664 23 18.578516688371487 29.02766452052627 28.824815711857326 23.569003079244915 24 22.356372901021953 24.27694542149954 29.51125608039304 23.85542559708547 25 18.742824223393338 30.069901699467316 27.367144172762277 23.820129904377072 26 19.987504513385993 27.923355606132528 28.852403149836302 23.23673673064518 27 22.230200942029867 28.83779803561214 27.896173865770884 21.035827156587107 28 17.410918945673032 26.982948529143286 33.843700935944405 21.762431589239277 29 22.61439658564885 23.454190653538294 29.752240465091752 24.17917229572111 30 22.97709025554893 26.610112418809766 28.684444336258412 21.72835298938289 31 23.266758354328186 26.72046217072567 26.600375675993654 23.41240379895249 32 24.16132160055824 29.00494545395535 24.540243175151833 22.293489770334578 33 21.318192698254283 26.193866663421083 26.49732848118983 25.9906121571348 34 22.288215701309184 27.08680711918179 27.30344964684022 23.3215275326688 35 21.364036529013465 27.48357938893825 25.616964651566605 25.53541943048169 36 24.138602533987317 25.04330822065082 29.86745858841571 20.95063065694615 37 21.350648507641314 27.12169711427285 30.638284061357705 20.88937031672813 38 18.685215161731357 26.302187927250305 27.598391814644874 27.41420509637347 39 20.88977601434547 25.842938224423804 28.75219583835384 24.515089922876886 40 20.80052253853113 27.008507479035575 28.356234963832055 23.834735018601236 41 18.918896989317982 28.59843644138278 28.355829266214723 24.12683730308452 42 21.291822353127323 26.20968887049726 30.188365403729982 22.31012337264543 43 22.83631318233268 23.508148436644234 29.70761372718458 23.94792465383851 44 20.58671989419406 24.816928950176276 29.455675506817748 25.140675648811918 45 19.631707702980663 24.702116524469652 27.40974242258275 28.256433349966937 46 24.755262912340918 26.070534587750366 27.277079301713258 21.897123198195455 47 18.580950874075516 25.311474345711165 33.792583036159826 22.314991744053486 48 20.604976286974267 24.608400374864598 29.881658005022537 24.9049653331386 49 20.93886542604335 21.39365245507913 33.72036886027369 23.94711325860383 50 20.946573680772772 22.426558588821408 31.086174230898745 25.54069349950708 51 19.775324659518276 23.778343049791268 26.74886100393932 29.69747128675113 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 486.0 1 485.5 2 485.0 3 715.5 4 946.0 5 693.0 6 440.0 7 468.5 8 497.0 9 513.0 10 529.0 11 590.5 12 652.0 13 573.0 14 494.0 15 512.5 16 531.0 17 513.0 18 495.0 19 594.0 20 693.0 21 669.5 22 646.0 23 802.0 24 958.0 25 1274.0 26 1677.5 27 1765.0 28 2164.0 29 2563.0 30 3215.5 31 3868.0 32 4021.0 33 4174.0 34 4924.5 35 5675.0 36 6465.0 37 7255.0 38 7840.5 39 8426.0 40 9886.0 41 11346.0 42 13307.0 43 15268.0 44 17495.5 45 19723.0 46 28259.0 47 36795.0 48 32553.5 49 28312.0 50 27430.0 51 26548.0 52 22233.5 53 17919.0 54 15362.0 55 12805.0 56 11558.5 57 10312.0 58 8950.5 59 7589.0 60 7109.0 61 6629.0 62 5482.0 63 4335.0 64 3581.5 65 2828.0 66 2106.0 67 1384.0 68 1039.0 69 694.0 70 506.5 71 319.0 72 275.0 73 231.0 74 165.5 75 94.5 76 89.0 77 71.5 78 54.0 79 38.5 80 23.0 81 17.0 82 11.0 83 6.0 84 1.0 85 2.5 86 4.0 87 3.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 246489.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.32071208045795 #Duplication Level Percentage of deduplicated Percentage of total 1 73.95408387412606 23.902486520696662 2 10.759787615951398 6.955279951640844 3 3.945171777523943 3.825322833878997 4 1.855222363086347 2.3984843137016254 5 1.1171501374471238 1.8053543971536257 6 0.7669423977305534 1.487287465160717 7 0.5410019204940565 1.2239897115084244 8 0.4430943803582412 1.145690071362211 9 0.45815707884067425 1.3327166729549798 >10 5.951021125434622 43.12159974684469 >50 0.1456060853301869 2.888161337828463 >100 0.048953770067907666 2.834203554722523 >500 0.007531349241216564 1.6085910527447473 >1k 0.00627612436768047 5.470832369801492 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGC 3967 1.6094024479794231 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCG 3617 1.4674082819111602 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTC 2995 1.2150643639269907 No Hit GCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC 1576 0.6393794449245199 No Hit CCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC 1330 0.5395778310593982 No Hit CTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGCT 775 0.3144156534368674 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCT 771 0.3127928629675158 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTCCAATT 708 0.2872339130752285 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTCCAATTCGTA 616 0.24990973228014232 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTC 551 0.22353938715317925 No Hit GAACTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCT 544 0.22069950383181403 No Hit TCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC 500 0.2028488086689467 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 483 0.1959519491742025 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCC 409 0.16593032549119838 No Hit ACTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC 333 0.1350973065735185 No Hit TTTTATGGGTTTATGAAAAGTTAGTGTGGTGTTAACACTAAAGTAGGTGGG 304 0.12333207567071958 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.0569761733789337E-4 0.0 0.0 0.33145495336505887 0.0 2 4.0569761733789337E-4 0.0 0.0 1.9603308869767009 0.0 3 4.0569761733789337E-4 0.0 0.0 2.5408841773872264 0.0 4 4.0569761733789337E-4 0.0 0.0 3.427333471270523 0.0 5 4.0569761733789337E-4 0.0 0.0 6.1844544786988465 0.0 6 4.0569761733789337E-4 0.0 0.0 7.2360227028386666 0.0 7 4.0569761733789337E-4 0.0 0.0 8.468532064311185 0.0 8 4.0569761733789337E-4 0.0 0.0 10.02600521727136 0.0 9 4.0569761733789337E-4 0.0 0.0 10.545703865081201 0.0 10 4.0569761733789337E-4 0.0 0.0 13.171378844492047 0.0 11 4.0569761733789337E-4 0.0 0.0 14.839201749368126 0.0 12 4.0569761733789337E-4 0.0 0.0 17.7906519155013 0.0 13 4.0569761733789337E-4 0.0 0.0 18.49210309587852 0.0 14 4.0569761733789337E-4 0.0 0.0 18.796782006499274 0.0 15 8.113952346757867E-4 0.0 0.0 19.457663425142705 0.0 16 8.113952346757867E-4 0.0 0.0 20.346952602347365 0.0 17 8.113952346757867E-4 0.0 0.0 21.364036529013465 0.0 18 8.113952346757867E-4 0.0 0.0 22.558004616838886 0.0 19 8.113952346757867E-4 0.0 0.0 23.524782038955085 0.0 20 8.113952346757867E-4 0.0 0.0 24.240838333556468 0.0 21 8.113952346757867E-4 0.0 0.0 25.049799382528228 0.0 22 8.113952346757867E-4 0.0 0.0 25.903792867024492 0.0 23 8.113952346757867E-4 0.0 0.0 26.649870785308877 0.0 24 8.113952346757867E-4 0.0 0.0 27.238132330448824 0.0 25 8.113952346757867E-4 0.0 0.0 27.73551760930508 0.0 26 8.113952346757867E-4 0.0 0.0 28.197607195452942 0.0 27 8.113952346757867E-4 0.0 0.0 28.735562236042988 0.0 28 8.113952346757867E-4 0.0 0.0 29.23051332919522 0.0 29 8.113952346757867E-4 0.0 0.0 29.74047523418895 0.0 30 8.113952346757867E-4 0.0 0.0 30.350238753047805 0.0 31 8.113952346757867E-4 0.0 0.0 30.92064960302488 0.0 32 8.113952346757867E-4 0.0 0.0 31.416817789029125 0.0 33 8.113952346757867E-4 0.0 0.0 31.903654929834598 0.0 34 8.113952346757867E-4 0.0 0.0 32.41077695150696 0.0 35 8.113952346757867E-4 0.0 0.0 32.930881296934146 0.0 36 8.113952346757867E-4 0.0 0.0 33.408793090158184 0.0 37 8.113952346757867E-4 0.0 0.0 33.90861255471847 0.0 38 8.113952346757867E-4 0.0 0.0 34.39666678837595 0.0 39 0.0012170928520136802 0.0 0.0 34.905817298135005 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAG 35 1.2067358E-7 45.000004 1 ACGGGTT 35 1.2067358E-7 45.000004 5 AACGGGT 35 1.2067358E-7 45.000004 4 TCACGAG 25 3.8818605E-5 45.0 32 ACAACGT 25 3.8818605E-5 45.0 41 CTTCGAT 20 7.0224935E-4 45.0 19 CGGGTCA 25 3.8818605E-5 45.0 6 AGACTGA 25 3.8818605E-5 45.0 41 AACAACG 20 7.0224935E-4 45.0 40 ACCGGCC 20 7.0224935E-4 45.0 31 TCCGCTA 20 7.0224935E-4 45.0 26 CACGGTT 20 7.0224935E-4 45.0 30 GATCGAG 20 7.0224935E-4 45.0 1 CAACGTA 25 3.8818605E-5 45.0 42 CCCTATG 20 7.0224935E-4 45.0 16 ACTTGCG 25 3.8818605E-5 45.0 16 CATTGCG 25 3.8818605E-5 45.0 24 TCGGGTA 25 3.8818605E-5 45.0 5 ATAGCGG 40 6.7775545E-9 45.0 2 GCACGGT 20 7.0224935E-4 45.0 29 >>END_MODULE