SRR2935635.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935635.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	188462
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCG	1030	0.54652927380586	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGC	977	0.5184068936974032	No Hit
CCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	967	0.5131007842429773	No Hit
GCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	829	0.4398764737719009	No Hit
GAATCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTC	814	0.43191730959026226	No Hit
CTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGCT	526	0.27910135730279845	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	340	0.18040772145047806	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCC	337	0.17881588861415032	No Hit
TCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	317	0.16820366970529868	No Hit
TATATATATATATATATATATATATATATATATATATATATATATATATAT	316	0.16767305875985608	No Hit
ATATATATATATATATATATATATATATATATATATATATATATATATATA	194	0.10293852341586103	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGGACAAT	193	0.10240791247041844	No Hit
ACTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	191	0.10134669057953329	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	189	0.10028546868864811	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGGGA	70	0.0	45.000004	4
ACGGGAG	45	3.8198777E-10	45.000004	5
GACGGGA	45	3.8198777E-10	45.000004	4
CGTAAGG	35	1.2047167E-7	45.000004	2
GCAATGG	35	1.2047167E-7	45.000004	2
GTGTTAT	20	7.018267E-4	45.0	20
AGCGTTG	20	7.018267E-4	45.0	1
GAGTGAT	20	7.018267E-4	45.0	9
AACCGAT	20	7.018267E-4	45.0	27
AGCCGGA	20	7.018267E-4	45.0	4
CAAACGG	20	7.018267E-4	45.0	2
CGAACGG	20	7.018267E-4	45.0	2
CTACTAG	20	7.018267E-4	45.0	25
TGCCAAC	20	7.018267E-4	45.0	41
AACCCGG	20	7.018267E-4	45.0	44
TGGGTAG	25	3.8783608E-5	45.0	6
GGCCGAT	20	7.018267E-4	45.0	8
GGTCCCG	20	7.018267E-4	45.0	18
ATAGCAG	25	3.8783608E-5	45.0	10
CACGCAG	20	7.018267E-4	45.0	1