##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935635.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 188462 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.080743067568 33.0 31.0 34.0 30.0 34.0 2 32.08750835712239 33.0 31.0 34.0 30.0 34.0 3 32.10914667147754 33.0 31.0 34.0 30.0 34.0 4 35.75712345194257 37.0 35.0 37.0 33.0 37.0 5 35.83820080440619 37.0 35.0 37.0 35.0 37.0 6 35.790652757585086 37.0 35.0 37.0 35.0 37.0 7 36.06257494879604 37.0 35.0 37.0 35.0 37.0 8 35.90034065222697 37.0 35.0 37.0 35.0 37.0 9 37.728894949645024 39.0 38.0 39.0 35.0 39.0 10 37.34137916396939 39.0 37.0 39.0 34.0 39.0 11 37.32965796818457 39.0 37.0 39.0 34.0 39.0 12 37.07986755950802 39.0 35.0 39.0 34.0 39.0 13 36.840551410894506 39.0 35.0 39.0 33.0 39.0 14 37.898181065679026 40.0 36.0 41.0 33.0 41.0 15 38.07589328352665 40.0 36.0 41.0 33.0 41.0 16 37.94287442561365 40.0 36.0 41.0 33.0 41.0 17 37.98778533603591 40.0 36.0 41.0 34.0 41.0 18 37.93642750262652 40.0 36.0 41.0 34.0 41.0 19 37.830114293597646 40.0 36.0 41.0 34.0 41.0 20 37.95666500408571 40.0 36.0 41.0 34.0 41.0 21 37.890848022413 40.0 35.0 41.0 34.0 41.0 22 37.986782481349024 40.0 35.0 41.0 34.0 41.0 23 38.02369708482347 40.0 35.0 41.0 34.0 41.0 24 37.94963971516805 40.0 35.0 41.0 34.0 41.0 25 37.733887998641634 40.0 35.0 41.0 34.0 41.0 26 37.801530281966656 40.0 35.0 41.0 34.0 41.0 27 37.780321762477314 40.0 35.0 41.0 34.0 41.0 28 37.70442317284121 40.0 35.0 41.0 34.0 41.0 29 37.70135624157655 40.0 35.0 41.0 34.0 41.0 30 37.50663794292748 39.0 35.0 41.0 33.0 41.0 31 37.48690452186648 39.0 35.0 41.0 33.0 41.0 32 37.418370812153114 40.0 35.0 41.0 33.0 41.0 33 37.309600874446836 39.0 35.0 41.0 33.0 41.0 34 37.2826988995129 40.0 35.0 41.0 33.0 41.0 35 37.16986448196453 39.0 35.0 41.0 33.0 41.0 36 37.067621058887205 39.0 35.0 41.0 33.0 41.0 37 37.027321157580836 39.0 35.0 41.0 32.0 41.0 38 36.935551994566545 39.0 35.0 41.0 32.0 41.0 39 36.95559316997591 39.0 35.0 41.0 32.0 41.0 40 36.83821672273456 39.0 35.0 41.0 32.0 41.0 41 36.71129989069414 39.0 35.0 41.0 31.0 41.0 42 36.75269285054812 39.0 35.0 41.0 32.0 41.0 43 36.669376319894724 39.0 35.0 41.0 31.0 41.0 44 36.55386762318133 39.0 35.0 41.0 31.0 41.0 45 36.55837781621759 39.0 35.0 41.0 31.0 41.0 46 36.428383440693615 39.0 35.0 41.0 31.0 41.0 47 36.32432532818287 38.0 35.0 41.0 31.0 41.0 48 36.261039360719934 38.0 35.0 40.0 31.0 41.0 49 36.24549776612792 38.0 35.0 40.0 31.0 41.0 50 36.104848722819455 38.0 35.0 40.0 31.0 41.0 51 34.939818106567905 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 3.0 11 4.0 12 4.0 13 2.0 14 4.0 15 4.0 16 16.0 17 26.0 18 50.0 19 73.0 20 172.0 21 232.0 22 334.0 23 475.0 24 797.0 25 1023.0 26 1378.0 27 1570.0 28 1756.0 29 2106.0 30 2622.0 31 3458.0 32 4591.0 33 6471.0 34 13815.0 35 20230.0 36 12310.0 37 17968.0 38 34720.0 39 62212.0 40 30.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.551814158822474 19.70370684806486 23.08529040337044 14.659188589742229 2 28.276787893580668 26.350670161624095 26.98103596480988 18.391505979985357 3 31.037026031772985 25.603039339495492 27.484055141089453 15.875879487642072 4 26.644098014453842 24.986469420891215 29.742865935838523 18.62656662881642 5 25.466672326516754 29.473315575553695 26.340588553660687 18.71942354426887 6 24.67128651929832 34.86485339219577 25.373284800118856 15.090575288387049 7 77.30099436491176 6.56843289363373 11.278135645382093 4.852437096072418 8 78.35903259012427 6.939329944498095 9.197610128301728 5.504027337075909 9 73.83292122549904 6.7727181076291245 11.261686706073373 8.132673960798463 10 41.4407148390657 24.398552493340834 19.08713692946058 15.073595738132886 11 34.94603686684849 24.872918678566503 22.521250968364974 17.659793486220035 12 33.4682853837909 21.95243603485053 26.214303148645353 18.364975432713226 13 25.417856119536037 27.455932760980993 27.455932760980993 19.67027835850198 14 18.64885228852501 32.49249185512198 26.609608303000076 22.24904755335293 15 16.7535099914041 27.154015133024163 38.335048975390265 17.75742590018147 16 19.92921649987796 23.832390614553596 35.26493404505948 20.97345884050896 17 19.716972121700927 23.952839299169064 28.95490868185629 27.375279897273717 18 21.890354554233745 25.64867188080356 29.95988581252454 22.501087752438156 19 25.680508537530113 27.42993282465431 26.024344430176903 20.865214207638676 20 28.219481911472872 26.54540437860152 26.740138595578948 18.49497511434666 21 24.984346977109446 28.274665449798896 26.66054695376256 20.080440619329096 22 20.762806295168257 26.400547590495698 27.15348452207872 25.683161592257324 23 21.565620655622883 28.42323651452282 26.401608812386584 23.609534017467713 24 23.802676401608814 23.614309515976693 28.290583778162176 24.292430304252317 25 20.60892912098991 26.872260720994152 28.339399985142894 24.179410172873045 26 20.470439664229396 29.542294998461227 27.22511699971347 22.762148337595907 27 22.537699907673694 29.421846313845762 27.980706986023705 20.059746792456835 28 20.559051692118306 27.94993155118804 30.926658955120928 20.56435780157273 29 22.94998461228258 26.565036983582896 29.209071324723286 21.275907079411237 30 22.49365919920196 27.654911865521964 28.65564410862667 21.195784826649405 31 26.31936411584298 26.74597531597882 24.271205866434613 22.66345470174359 32 28.222665577145523 28.880623149494326 23.64455433986692 19.252156933493225 33 25.017775466672326 28.776092793242142 24.771571987986967 21.43455975209857 34 23.768186690155044 27.133851917097346 26.264180577516953 22.833780815230657 35 21.730640659655528 27.799238042682344 26.149568613301355 24.32055268436077 36 24.83524530144008 28.345236705542764 26.21058887202725 20.60892912098991 37 23.772431577718585 29.30405068395751 28.28793072343496 18.635587014888944 38 22.619944604217295 30.51808852713014 24.003247338986107 22.85871952966646 39 23.947002578769194 26.89348515881186 25.77867156243699 23.38084069998196 40 23.89871698273392 25.82642654752682 28.513440375248063 21.7614160944912 41 18.93485158811856 27.76156466555592 27.420912438581784 25.88267130774374 42 23.259861404421052 27.476626587853254 26.710954993579605 22.55255701414609 43 24.629368254608355 27.078137767825876 26.412751642240877 21.87974233532489 44 23.23333085714892 26.99058696182785 26.44989440842186 23.326187772601372 45 22.381169678768135 26.629771518926894 25.278836051830076 25.710222750474898 46 22.907005125701733 28.152624932347102 25.838099988326558 23.102269953624603 47 21.048274983816366 27.274994428585075 29.62719274973204 22.04953783786652 48 22.608801774363002 25.12602009954261 27.725483121265825 24.53969500482856 49 21.80333435918116 24.64051108446265 30.040538676231815 23.515615880124376 50 20.647663720007216 26.044507646103725 27.998747758168758 25.3090808757203 51 19.77905360231771 26.43397608005858 25.665120820112275 28.121849497511437 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 658.0 1 552.0 2 446.0 3 603.0 4 760.0 5 556.0 6 352.0 7 403.5 8 455.0 9 450.5 10 446.0 11 491.5 12 537.0 13 494.0 14 451.0 15 462.0 16 473.0 17 451.5 18 430.0 19 483.0 20 536.0 21 496.5 22 457.0 23 552.5 24 648.0 25 691.0 26 960.0 27 1186.0 28 1438.0 29 1690.0 30 2085.5 31 2481.0 32 2799.0 33 3117.0 34 3591.5 35 4066.0 36 4463.0 37 4860.0 38 5341.0 39 5822.0 40 6900.5 41 7979.0 42 9877.0 43 11775.0 44 13402.0 45 15029.0 46 17989.0 47 20949.0 48 19906.5 49 18864.0 50 18734.5 51 18605.0 52 16563.0 53 14521.0 54 12475.0 55 10429.0 56 9960.5 57 9492.0 58 9025.5 59 8559.0 60 8090.0 61 7621.0 62 6740.5 63 5860.0 64 4836.0 65 3812.0 66 2884.5 67 1957.0 68 1519.5 69 1082.0 70 866.5 71 651.0 72 518.5 73 386.0 74 261.0 75 107.5 76 79.0 77 70.0 78 61.0 79 31.0 80 1.0 81 0.5 82 0.0 83 1.5 84 3.0 85 2.0 86 1.0 87 1.5 88 2.0 89 2.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 188462.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.50947140537615 #Duplication Level Percentage of deduplicated Percentage of total 1 74.9298165437096 24.35928728337808 2 9.608604818175882 6.247413271640967 3 3.305151139257035 3.223461493563689 4 1.6387020957106484 2.1309335568974115 5 1.0576483645622512 1.7191794632339676 6 0.7818110596069726 1.5249758572019825 7 0.5761572109420905 1.3111396461886216 8 0.5304563556832278 1.3795884581507147 9 0.4733302866096494 1.3848945676051405 >10 6.892668277077757 48.80453353991786 >50 0.1615851668081217 3.147053517419957 >100 0.03427564144414703 2.038607252390402 >500 0.008160867010511197 2.1824028186053424 >1k 0.001632173402102239 0.54652927380586 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCG 1030 0.54652927380586 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGC 977 0.5184068936974032 No Hit CCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 967 0.5131007842429773 No Hit GCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 829 0.4398764737719009 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTC 814 0.43191730959026226 No Hit CTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGCT 526 0.27910135730279845 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 340 0.18040772145047806 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCC 337 0.17881588861415032 No Hit TCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 317 0.16820366970529868 No Hit TATATATATATATATATATATATATATATATATATATATATATATATATAT 316 0.16767305875985608 No Hit ATATATATATATATATATATATATATATATATATATATATATATATATATA 194 0.10293852341586103 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGGACAAT 193 0.10240791247041844 No Hit ACTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 191 0.10134669057953329 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 189 0.10028546868864811 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.306109454425826E-4 0.0 0.0 0.2966115185024037 0.0 2 5.306109454425826E-4 0.0 0.0 1.5897103925459775 0.0 3 5.306109454425826E-4 0.0 0.0 2.107586675297938 0.0 4 5.306109454425826E-4 0.0 0.0 2.7029321560845156 0.0 5 5.306109454425826E-4 0.0 0.0 4.416805509864058 0.0 6 5.306109454425826E-4 0.0 0.0 5.252517748936125 0.0 7 5.306109454425826E-4 0.0 0.0 6.154025745243072 0.0 8 5.306109454425826E-4 0.0 0.0 7.496471437212807 0.0 9 5.306109454425826E-4 0.0 0.0 7.954919294075198 0.0 10 5.306109454425826E-4 0.0 0.0 9.450180938332396 0.0 11 5.306109454425826E-4 0.0 0.0 10.856830554700682 0.0 12 5.306109454425826E-4 0.0 0.0 12.44654094724666 0.0 13 5.306109454425826E-4 0.0 0.0 12.934172406108393 0.0 14 5.306109454425826E-4 0.0 0.0 13.124661735522281 0.0 15 5.306109454425826E-4 0.0 0.0 13.510946503804481 0.0 16 5.306109454425826E-4 0.0 0.0 14.210822340843247 0.0 17 5.306109454425826E-4 0.0 0.0 15.060330464496822 0.0 18 5.306109454425826E-4 0.0 0.0 16.196899109634835 0.0 19 5.306109454425826E-4 0.0 0.0 16.799673143657607 0.0 20 5.306109454425826E-4 0.0 0.0 17.34673302840891 0.0 21 5.306109454425826E-4 0.0 0.0 17.927221402723095 0.0 22 5.306109454425826E-4 0.0 0.0 18.591546306417207 0.0 23 5.306109454425826E-4 0.0 0.0 19.17893262302215 0.0 24 5.306109454425826E-4 0.0 0.0 19.664972249047555 0.0 25 5.306109454425826E-4 0.0 0.0 20.07725695365644 0.0 26 5.306109454425826E-4 0.0 0.0 20.460358056265985 0.0 27 5.306109454425826E-4 0.0 0.0 20.8705203170931 0.0 28 5.306109454425826E-4 0.0 0.0 21.2891723530473 0.0 29 5.306109454425826E-4 0.0 0.0 21.71896721885579 0.0 30 5.306109454425826E-4 0.0 0.0 22.219863951353588 0.0 31 5.306109454425826E-4 0.0 0.0 22.679373030106866 0.0 32 5.306109454425826E-4 0.0 0.0 23.11818828198788 0.0 33 5.306109454425826E-4 0.0 0.0 23.540554594560177 0.0 34 5.306109454425826E-4 0.0 0.0 23.959206630514373 0.0 35 5.306109454425826E-4 0.0 0.0 24.456389086394076 0.0 36 5.306109454425826E-4 0.0 0.0 24.879286009911812 0.0 37 5.306109454425826E-4 0.0 0.0 25.32446859313814 0.0 38 5.306109454425826E-4 0.0 0.0 25.769120565419023 0.0 39 5.306109454425826E-4 0.0 0.0 26.22438475660876 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGA 70 0.0 45.000004 4 ACGGGAG 45 3.8198777E-10 45.000004 5 GACGGGA 45 3.8198777E-10 45.000004 4 CGTAAGG 35 1.2047167E-7 45.000004 2 GCAATGG 35 1.2047167E-7 45.000004 2 GTGTTAT 20 7.018267E-4 45.0 20 AGCGTTG 20 7.018267E-4 45.0 1 GAGTGAT 20 7.018267E-4 45.0 9 AACCGAT 20 7.018267E-4 45.0 27 AGCCGGA 20 7.018267E-4 45.0 4 CAAACGG 20 7.018267E-4 45.0 2 CGAACGG 20 7.018267E-4 45.0 2 CTACTAG 20 7.018267E-4 45.0 25 TGCCAAC 20 7.018267E-4 45.0 41 AACCCGG 20 7.018267E-4 45.0 44 TGGGTAG 25 3.8783608E-5 45.0 6 GGCCGAT 20 7.018267E-4 45.0 8 GGTCCCG 20 7.018267E-4 45.0 18 ATAGCAG 25 3.8783608E-5 45.0 10 CACGCAG 20 7.018267E-4 45.0 1 >>END_MODULE