##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935634.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 231725 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.96195490344158 33.0 31.0 34.0 30.0 34.0 2 31.97109936346963 33.0 31.0 34.0 30.0 34.0 3 32.01781853490128 33.0 31.0 34.0 30.0 34.0 4 35.7168410831805 37.0 35.0 37.0 35.0 37.0 5 35.72760384075952 37.0 35.0 37.0 35.0 37.0 6 35.63312978746359 37.0 35.0 37.0 33.0 37.0 7 35.856489373179414 37.0 35.0 37.0 35.0 37.0 8 35.5683935699644 37.0 35.0 37.0 33.0 37.0 9 37.41658431330241 39.0 37.0 39.0 34.0 39.0 10 37.061970007552056 39.0 37.0 39.0 33.0 39.0 11 37.09013270039918 39.0 37.0 39.0 33.0 39.0 12 36.8742000215773 39.0 35.0 39.0 33.0 39.0 13 36.534163340166145 39.0 35.0 39.0 32.0 39.0 14 37.665301542777 40.0 36.0 41.0 33.0 41.0 15 37.61733520336606 40.0 36.0 41.0 32.0 41.0 16 37.740623583989645 39.0 36.0 41.0 33.0 41.0 17 37.5539238321286 39.0 35.0 41.0 32.0 41.0 18 37.55073902254828 39.0 36.0 41.0 33.0 41.0 19 37.445092242960406 39.0 36.0 41.0 32.0 41.0 20 37.25326140899774 39.0 35.0 41.0 32.0 41.0 21 37.56318480958032 39.0 35.0 41.0 33.0 41.0 22 37.616329701154385 39.0 35.0 41.0 33.0 41.0 23 37.558908188585605 39.0 35.0 41.0 33.0 41.0 24 37.463510626820586 39.0 35.0 41.0 32.0 41.0 25 37.47425612255907 39.0 35.0 41.0 33.0 41.0 26 37.32496277915633 39.0 35.0 41.0 32.0 41.0 27 37.29697270471464 39.0 35.0 41.0 33.0 41.0 28 37.232344373718846 39.0 35.0 41.0 32.0 41.0 29 37.121821124177366 39.0 35.0 41.0 32.0 41.0 30 37.12502751105837 39.0 35.0 41.0 32.0 41.0 31 37.0957427985759 39.0 35.0 41.0 32.0 41.0 32 36.871714316539 39.0 35.0 41.0 31.0 41.0 33 36.83753587226238 39.0 35.0 41.0 31.0 41.0 34 36.71127413960514 39.0 35.0 41.0 31.0 41.0 35 36.63864063005718 39.0 35.0 41.0 31.0 41.0 36 36.68493688639551 39.0 35.0 41.0 31.0 41.0 37 36.58468443197756 39.0 35.0 41.0 31.0 41.0 38 36.40626604811738 39.0 35.0 41.0 30.0 41.0 39 36.39971086417089 39.0 35.0 41.0 30.0 41.0 40 36.17158701046499 39.0 35.0 41.0 30.0 41.0 41 36.26632430682922 39.0 35.0 41.0 30.0 41.0 42 36.23956845398641 39.0 35.0 41.0 30.0 41.0 43 36.25670514618621 39.0 35.0 41.0 30.0 41.0 44 36.299212428525195 39.0 35.0 41.0 30.0 41.0 45 36.34497356780667 39.0 35.0 41.0 30.0 41.0 46 36.13084906678174 39.0 35.0 41.0 30.0 41.0 47 35.858172402632434 38.0 35.0 40.0 29.0 41.0 48 35.96283525730931 38.0 35.0 40.0 29.0 41.0 49 36.03516236918762 39.0 35.0 40.0 29.0 41.0 50 35.809463804078106 39.0 35.0 40.0 29.0 41.0 51 34.72618836983494 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 5.0 11 2.0 12 1.0 13 4.0 14 4.0 15 6.0 16 10.0 17 28.0 18 62.0 19 187.0 20 437.0 21 885.0 22 1307.0 23 1754.0 24 1799.0 25 1961.0 26 2024.0 27 2162.0 28 2203.0 29 2514.0 30 3360.0 31 4611.0 32 6527.0 33 8990.0 34 16035.0 35 23111.0 36 15572.0 37 21910.0 38 41360.0 39 72840.0 40 49.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 51.44805264861366 15.858452907541269 20.100981767180926 12.59251267666415 2 24.852303376847555 37.18890926745064 21.89664472974431 16.06214262595749 3 25.399935268097963 37.40554536627468 23.91239615924048 13.282123206386881 4 24.64602438234977 21.54320854461107 38.311360448807854 15.49940662423131 5 33.97216528212321 24.978746358830513 22.079188693494444 18.96989966555184 6 19.35483870967742 42.654871075628435 24.69392598985867 13.296364224835472 7 68.6378250080915 5.369295501132808 21.827597367569318 4.165282123206387 8 68.54245333908729 16.190743338008414 9.83148128169166 5.435322041212644 9 65.8008415147265 5.303268961052972 9.547524004747006 19.348365519473514 10 43.224943359585716 21.10734707088143 19.309957924263674 16.35775164526918 11 36.27101089653684 22.473190203905492 23.39669867299601 17.859100226561658 12 28.203689718416225 19.466177581184592 27.562412342215985 24.76772035818319 13 24.391412234329486 25.27953393030532 34.80418599633186 15.524867839033337 14 19.257740856618838 35.4113712374582 24.72888121695976 20.60200668896321 15 14.319991369079728 23.60340921350739 42.33682166360988 19.739777753803 16 17.21566512029345 24.40694789081886 30.667385910022656 27.710001078865034 17 17.87808825115978 26.303592620563165 31.073039162800736 24.745279965476318 18 19.059229690365736 24.66026540079836 30.921998058042938 25.358506850792967 19 19.96245549681735 27.576653360664583 27.029884561441364 25.43100658107671 20 23.835149422807206 26.110691552486788 32.772035818319125 17.28212320638688 21 20.405221706764483 33.29204876469953 27.44330564246413 18.859423886071852 22 17.758118459380732 23.18092566619916 31.850253533282984 27.21070234113712 23 19.707843348797066 31.62412342215989 28.461754234545257 20.20627899449779 24 21.515589599741073 25.927716042723052 27.333261408997732 25.22343294853814 25 16.65897076275758 35.720789729204874 26.479663394109398 21.140576113928148 26 16.917466824900202 27.27543424317618 30.74247491638796 25.064624015535657 27 22.079188693494444 29.354191390657032 27.146401985111662 21.420217930736865 28 15.296148451828676 30.18060200668896 33.799546876685724 20.723702664796633 29 19.38159456252023 26.704067321178123 30.398964289567378 23.515373826734276 30 18.24447081670083 31.135613334771822 32.56014672564462 18.059769122882727 31 23.268961052972273 27.23702664796634 23.229690365735248 26.26432193332614 32 25.299385046930627 30.781745603624987 22.398964289567374 21.519905059877008 33 23.985327435537815 24.578703204229154 23.643974538785198 27.791994821447837 34 20.81044341352897 29.477182004531233 24.085446110691553 25.626928471248245 35 19.001834070557774 27.658215557233788 28.257632970115438 25.082317402092997 36 20.29388283525731 32.81648505771928 23.98575898155141 22.903873125472003 37 16.790160750890063 26.041644190311793 32.77635127845506 24.391843780343077 38 20.604595965044773 31.31384183838602 22.41234221598878 25.669219980580426 39 21.329161721868594 24.631783363901175 24.736649045204445 29.302405869025783 40 22.890063653037004 26.426151688423776 27.13086632862229 23.552918329916928 41 16.812601143596936 25.786168950264322 23.933110367892976 33.468119538245766 42 18.73427554212968 27.974970331211562 29.13884992987377 24.151904196784983 43 22.468874743769554 24.391412234329486 23.866220735785955 29.273492286115005 44 20.895457978206927 24.18211241773654 29.701154385586364 25.22127521847017 45 17.980364656381486 26.662638903873127 26.203905491423026 29.15309094832236 46 26.040781098284604 27.90117596288704 24.18901715395404 21.869025784874314 47 17.129787463588304 25.27262919408782 35.44373718847772 22.153846153846153 48 21.55744956305966 26.308771172726292 25.416334016614524 26.717445247599525 49 18.872370266479663 21.66490452044449 33.97734383428633 25.485381378789512 50 21.155680224403927 23.464019851116625 29.221275218470172 26.159024706009276 51 19.174452475995253 24.309418491746683 25.567375121372315 30.948753910885745 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 461.0 1 419.5 2 378.0 3 607.0 4 836.0 5 623.5 6 411.0 7 416.0 8 421.0 9 443.0 10 465.0 11 457.0 12 449.0 13 450.0 14 451.0 15 432.0 16 413.0 17 430.0 18 447.0 19 434.5 20 422.0 21 492.0 22 562.0 23 575.5 24 589.0 25 879.5 26 1416.5 27 1663.0 28 1917.0 29 2171.0 30 2626.0 31 3081.0 32 3574.0 33 4067.0 34 4822.0 35 5577.0 36 6269.5 37 6962.0 38 7588.5 39 8215.0 40 8984.0 41 9753.0 42 11708.0 43 13663.0 44 15436.0 45 17209.0 46 32508.5 47 47808.0 48 36126.5 49 24445.0 50 23178.5 51 21912.0 52 18924.5 53 15937.0 54 13595.0 55 11253.0 56 10261.0 57 9269.0 58 8209.0 59 7149.0 60 5882.5 61 4616.0 62 4352.0 63 4088.0 64 3363.0 65 2638.0 66 1894.5 67 1151.0 68 865.0 69 579.0 70 518.0 71 457.0 72 357.5 73 258.0 74 202.5 75 120.0 76 93.0 77 71.0 78 49.0 79 36.0 80 23.0 81 17.5 82 12.0 83 6.5 84 1.0 85 1.5 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 231725.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.68302945301543 #Duplication Level Percentage of deduplicated Percentage of total 1 75.46196007734468 22.399395835580968 2 9.266824651440036 5.50134858129248 3 3.2362647747263136 2.8818642787787248 4 1.6995478533940074 2.0179091595641387 5 1.0889318581626273 1.6161398209084041 6 0.8301469839931378 1.4784766425720142 7 0.6513237282468052 1.3533282986298414 8 0.5684544146082607 1.349875930521092 9 0.47976971053894135 1.2816916603732873 >10 6.471075701844933 41.02578487431222 >50 0.18318479856941394 3.3099579242636747 >100 0.0494308186615879 2.933218254396375 >500 0.0 0.0 >1k 0.00872308564616257 3.542561225590678 >5k 0.004361542823081285 9.308447513216096 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGC 8207 3.5416981335634907 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCG 7223 3.1170568561872907 No Hit GAATCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTC 6140 2.6496925234653146 No Hit GCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGC 1945 0.8393569964397454 TruSeq Adapter, Index 16 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCT 1437 0.6201316215341461 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATACGCACT 1364 0.588628762541806 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATACGCACTCGTA 1265 0.5459057071960298 No Hit GAACTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCT 1126 0.4859208113065056 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTC 1072 0.4626173265724458 No Hit CCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGC 469 0.202395080375445 TruSeq Adapter, Index 16 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 429 0.18513323983169705 No Hit CTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGCT 406 0.17520768151904198 TruSeq Adapter, Index 13 (95% over 22bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCATACGCACTCGTATG 372 0.1605351170568562 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCATACGCAC 340 0.1467256446218578 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCATACGCACTCGTAT 311 0.13421081022764053 No Hit GAATGCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTT 294 0.12687452799654764 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCATACGCACTCGT 291 0.12557988995576655 No Hit GGGGAAGGGAAGGAAAGGAAAGGAAGGGAAAGAGAAGAGAAGAGAAGAGAA 254 0.10961268745279965 No Hit TATATATATATATATATATATATATATATATATATATATATATATATATAT 249 0.10745495738483114 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.18729096989966554 0.0 2 0.0 0.0 0.0 1.4663933541913907 0.0 3 0.0 0.0 0.0 1.8202610853382242 0.0 4 4.3154601359369945E-4 0.0 0.0 2.691552486783903 0.0 5 4.3154601359369945E-4 0.0 0.0 6.431330240586902 0.0 6 4.3154601359369945E-4 0.0 0.0 7.187830402416657 0.0 7 4.3154601359369945E-4 0.0 0.0 8.44319775596073 0.0 8 4.3154601359369945E-4 0.0 0.0 9.855647858452908 0.0 9 4.3154601359369945E-4 0.0 0.0 10.22332506203474 0.0 10 4.3154601359369945E-4 0.0 0.0 14.239292264537706 0.0 11 8.630920271873989E-4 0.0 0.0 15.246952206278994 0.0 12 8.630920271873989E-4 0.0 0.0 19.815729852195492 0.0 13 8.630920271873989E-4 0.0 0.0 20.36854029560902 0.0 14 8.630920271873989E-4 0.0 0.0 20.63221490991477 0.0 15 8.630920271873989E-4 0.0 0.0 21.463372532096233 0.0 16 8.630920271873989E-4 0.0 0.0 22.097745172078973 0.0 17 8.630920271873989E-4 0.0 0.0 22.786061063760922 0.0 18 8.630920271873989E-4 0.0 0.0 23.528320207142087 0.0 19 8.630920271873989E-4 0.0 0.0 24.626173265724457 4.3154601359369945E-4 20 8.630920271873989E-4 0.0 0.0 25.187183083396267 4.3154601359369945E-4 21 8.630920271873989E-4 0.0 0.0 25.709353759844642 4.3154601359369945E-4 22 8.630920271873989E-4 0.0 0.0 26.29237242420973 4.3154601359369945E-4 23 8.630920271873989E-4 0.0 0.0 26.829215665120294 4.3154601359369945E-4 24 8.630920271873989E-4 0.0 0.0 27.23918437803431 4.3154601359369945E-4 25 8.630920271873989E-4 0.0 0.0 27.586578918977235 4.3154601359369945E-4 26 8.630920271873989E-4 0.0 0.0 27.933973459920164 4.3154601359369945E-4 27 8.630920271873989E-4 0.0 0.0 28.414715719063544 4.3154601359369945E-4 28 8.630920271873989E-4 0.0 0.0 28.770741180278346 4.3154601359369945E-4 29 8.630920271873989E-4 0.0 0.0 29.157406408458304 4.3154601359369945E-4 30 8.630920271873989E-4 0.0 0.0 29.616139820908405 4.3154601359369945E-4 31 8.630920271873989E-4 0.0 0.0 30.03560254612148 4.3154601359369945E-4 32 8.630920271873989E-4 0.0 0.0 30.423562412342218 4.3154601359369945E-4 33 8.630920271873989E-4 0.0 0.0 30.787355701801705 4.3154601359369945E-4 34 8.630920271873989E-4 0.0 0.0 31.164526917682597 4.3154601359369945E-4 35 8.630920271873989E-4 0.0 0.0 31.548171323767395 4.3154601359369945E-4 36 8.630920271873989E-4 0.0 0.0 31.90462833099579 4.3154601359369945E-4 37 8.630920271873989E-4 0.0 0.0 32.26971625849606 4.3154601359369945E-4 38 8.630920271873989E-4 0.0 0.0 32.60502751105837 4.3154601359369945E-4 39 8.630920271873989E-4 0.0 0.0 32.9727047146402 4.3154601359369945E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGA 35 1.2063174E-7 45.000004 13 CTATGCG 35 1.2063174E-7 45.000004 1 CGAACCC 35 1.2063174E-7 45.000004 34 GCGAACC 35 1.2063174E-7 45.000004 33 GGGTATA 30 2.1579763E-6 45.000004 7 GGCCGGT 30 2.1579763E-6 45.000004 9 AACGAGC 35 1.2063174E-7 45.000004 15 CATCGGG 30 2.1579763E-6 45.000004 3 GACGCTT 30 2.1579763E-6 45.000004 9 ACCCGGT 30 2.1579763E-6 45.000004 13 TTACCCG 30 2.1579763E-6 45.000004 11 CGATCAC 30 2.1579763E-6 45.000004 34 CGATACC 30 2.1579763E-6 45.000004 34 TTGGGCG 35 1.2063174E-7 45.000004 5 GTTGAAC 20 7.0216187E-4 45.0 43 CGGGTTA 20 7.0216187E-4 45.0 6 GTTTGCG 20 7.0216187E-4 45.0 1 CGGAAAC 20 7.0216187E-4 45.0 37 CGAACAC 20 7.0216187E-4 45.0 34 GTTCTCG 20 7.0216187E-4 45.0 23 >>END_MODULE