##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935632.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 629120 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.118400305188196 33.0 31.0 34.0 30.0 34.0 2 32.12988777975585 33.0 31.0 34.0 30.0 34.0 3 32.151889941505594 33.0 31.0 34.0 30.0 34.0 4 35.80668393947101 37.0 35.0 37.0 35.0 37.0 5 35.86845434893184 37.0 35.0 37.0 35.0 37.0 6 35.80639464649033 37.0 35.0 37.0 35.0 37.0 7 36.04890481943031 37.0 35.0 37.0 35.0 37.0 8 35.818851729399796 37.0 35.0 37.0 35.0 37.0 9 37.63457051119023 39.0 37.0 39.0 35.0 39.0 10 37.31179266276704 39.0 37.0 39.0 34.0 39.0 11 37.33051246185148 39.0 37.0 39.0 34.0 39.0 12 37.270938771617494 39.0 37.0 39.0 34.0 39.0 13 37.22544983468973 39.0 37.0 39.0 34.0 39.0 14 38.40265768056968 40.0 38.0 41.0 34.0 41.0 15 38.48109263733469 40.0 38.0 41.0 34.0 41.0 16 38.28794029755849 40.0 37.0 41.0 34.0 41.0 17 38.325241607324514 40.0 37.0 41.0 34.0 41.0 18 38.258461024923704 40.0 37.0 41.0 34.0 41.0 19 38.14213822482197 40.0 37.0 41.0 34.0 41.0 20 38.25865812563581 40.0 37.0 41.0 34.0 41.0 21 38.22008996693795 40.0 37.0 41.0 34.0 41.0 22 38.306490017802645 40.0 37.0 41.0 34.0 41.0 23 38.32109454476094 40.0 37.0 41.0 34.0 41.0 24 38.262512716174975 40.0 37.0 41.0 34.0 41.0 25 38.01960357324517 40.0 37.0 41.0 34.0 41.0 26 38.0984375 40.0 37.0 41.0 34.0 41.0 27 38.09272475839268 40.0 37.0 41.0 34.0 41.0 28 37.95301373346897 40.0 37.0 41.0 34.0 41.0 29 37.94461152085453 40.0 37.0 41.0 34.0 41.0 30 37.80062945066124 40.0 36.0 41.0 33.0 41.0 31 37.75952441505595 40.0 36.0 41.0 33.0 41.0 32 37.72400019074262 40.0 36.0 41.0 33.0 41.0 33 37.67085611648016 40.0 36.0 41.0 33.0 41.0 34 37.569652848423196 40.0 36.0 41.0 33.0 41.0 35 37.51474599440488 40.0 36.0 41.0 33.0 41.0 36 37.39728350712106 40.0 36.0 41.0 33.0 41.0 37 37.391343463886066 40.0 36.0 41.0 33.0 41.0 38 37.22693444811801 40.0 36.0 41.0 32.0 41.0 39 37.16699516785351 40.0 35.0 41.0 32.0 41.0 40 37.03457369023398 40.0 35.0 41.0 31.0 41.0 41 36.886754514242114 39.0 35.0 41.0 31.0 41.0 42 36.9619754577823 40.0 35.0 41.0 31.0 41.0 43 36.90151481434385 39.0 35.0 41.0 31.0 41.0 44 36.79160732451678 39.0 35.0 41.0 31.0 41.0 45 36.77569780010173 39.0 35.0 41.0 31.0 41.0 46 36.63250095371313 39.0 35.0 41.0 31.0 41.0 47 36.50856116480163 39.0 35.0 41.0 31.0 41.0 48 36.41364127670397 39.0 35.0 41.0 31.0 41.0 49 36.36134123855544 39.0 35.0 41.0 30.0 41.0 50 36.207397634791455 39.0 35.0 41.0 30.0 41.0 51 35.00693349440488 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 10.0 9 14.0 10 24.0 11 7.0 12 15.0 13 18.0 14 18.0 15 23.0 16 47.0 17 86.0 18 160.0 19 299.0 20 599.0 21 964.0 22 1454.0 23 1985.0 24 2655.0 25 3462.0 26 4517.0 27 5317.0 28 6043.0 29 7028.0 30 8597.0 31 10811.0 32 14199.0 33 19410.0 34 35362.0 35 47037.0 36 41529.0 37 64111.0 38 121590.0 39 231571.0 40 157.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.33027085452696 19.350998219735505 20.764401068158698 13.55432985757884 2 29.354018311291963 28.260427263479144 24.566060528992878 17.819493896236015 3 31.45234613428281 27.197831892166835 25.4385490844354 15.911272889114954 4 29.114000508647 24.637906917599185 28.055378942014244 18.192713631739572 5 27.47933621566633 29.740272126144458 23.609168362156662 19.17122329603255 6 24.79161368260427 36.842255849440484 24.419188708036625 13.946941759918616 7 76.61002670396745 6.777085452695829 11.915691759918616 4.697196083418108 8 76.98467700915565 9.086501780264497 9.047240590030519 4.881580620549339 9 70.78808494404883 8.898938199389624 10.902212614445576 9.41076424211597 10 38.63539547304171 27.44086978636826 18.75476856561546 15.16896617497457 11 30.544570193285857 26.556618769074262 24.533634282807732 18.365176754832145 12 27.500953713123096 23.158697863682605 29.06997075279756 20.270377670396744 13 25.404215412004067 24.621693794506612 30.216016022380465 19.75807477110885 14 20.53757629704985 29.86123474059003 27.44532044760936 22.15586851475076 15 19.092541963377414 26.64229399796541 34.002733977619535 20.26243006103764 16 21.117751780264495 25.757407171922686 31.13173957273652 21.993101475076298 17 21.363809766022378 26.29673194303154 28.77193540183113 23.567522889114954 18 21.30213631739573 26.94859486266531 29.04326678535097 22.706002034587996 19 23.680855798575788 27.739223041709053 26.662639877924722 21.917281281790437 20 25.244627416073246 26.282108341810783 28.98493133265514 19.488332909460834 21 24.357833163784335 27.980035605289928 28.08621566632757 19.57591556459817 22 22.031885808748726 25.79666836215666 27.93393947100712 24.237506358087487 23 21.529278992878943 28.264401068158694 28.26694430315361 21.93937563580875 24 22.63431459816887 25.31329476093591 28.86682985757884 23.18556078331638 25 21.371280518819937 28.94344481180061 26.95972151576806 22.725553153611393 26 21.153198118006102 27.86463631739573 27.79676373346897 23.185401831129195 27 23.369786368260428 28.410001271617496 27.052072736520856 21.16813962360122 28 20.11078967446592 28.68387589013225 29.20905391658189 21.996280518819937 29 22.98321464903357 26.841461088504577 27.526227110885042 22.649097151576804 30 22.848582146490333 27.87083545269583 27.90262589013225 21.377956510681585 31 23.081606052899286 29.057254577822988 24.983627924720246 22.877511444557477 32 23.794347660223806 29.14134028484232 25.683971261444555 21.38034079348932 33 22.59998092573754 28.996534842319434 25.234613428280774 23.16887080366226 34 22.777371566632755 28.221642929806713 26.607483468972532 22.393502034587996 35 22.523683875890132 26.44789547304171 26.87341047812818 24.15501017293998 36 22.926150813835196 29.579412512716175 25.789197609359103 21.705239064089522 37 22.206256358087487 29.395186927772126 27.29622329603255 21.102333418107833 38 20.604336215666326 30.232388097660223 25.711787894201425 23.451487792472026 39 21.936991353001016 27.90119532044761 26.067840793489317 24.093972533062054 40 22.045396744659207 26.765164038657176 29.769996185147505 21.419443031536115 41 20.019233214649034 27.707750508647 27.548957273652086 24.72405900305188 42 21.22361393692777 26.93015640895219 29.054234486266534 22.79199516785351 43 22.72444048830112 26.077060020345883 26.553280773143438 24.645218718209563 44 21.234422685656153 27.346452187182095 27.603001017293998 23.81612410986775 45 21.20581129196338 26.436450915564595 26.319144201424212 26.038593591047814 46 22.518597405900305 28.183494404883014 26.127288911495423 23.17061927772126 47 20.850553153611393 26.949548575788402 30.095212360122076 22.10468591047813 48 21.231561546286876 26.287194811800614 28.282680569684636 24.198563072227874 49 20.037671668362155 25.719417599186166 30.4749491353001 23.767961597151576 50 20.305982960325533 26.085007629704986 28.68180951169888 24.9271998982706 51 20.33141531027467 25.717033316378433 27.30130976602238 26.650241607324514 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 673.0 1 1044.5 2 1416.0 3 2077.0 4 2738.0 5 1984.5 6 1231.0 7 1215.5 8 1200.0 9 1192.5 10 1185.0 11 1274.0 12 1363.0 13 1266.0 14 1169.0 15 1232.0 16 1295.0 17 1382.0 18 1469.0 19 1503.5 20 1538.0 21 1981.0 22 2424.0 23 2583.0 24 2742.0 25 3301.0 26 5181.0 27 6502.0 28 7665.0 29 8828.0 30 9928.5 31 11029.0 32 13458.0 33 15887.0 34 17761.0 35 19635.0 36 19781.5 37 19928.0 38 21780.5 39 23633.0 40 27406.5 41 31180.0 42 33929.5 43 36679.0 44 40335.5 45 43992.0 46 55498.0 47 67004.0 48 62683.0 49 58362.0 50 56583.5 51 54805.0 52 47748.0 53 40691.0 54 36789.5 55 32888.0 56 30956.0 57 29024.0 58 27369.5 59 25715.0 60 25312.0 61 24909.0 62 22607.5 63 20306.0 64 16580.5 65 12855.0 66 10315.5 67 7776.0 68 6587.5 69 5399.0 70 4411.5 71 3424.0 72 2642.0 73 1860.0 74 1572.5 75 1035.0 76 785.0 77 500.5 78 216.0 79 156.0 80 96.0 81 82.5 82 69.0 83 43.0 84 17.0 85 15.0 86 13.0 87 11.5 88 10.0 89 8.5 90 7.0 91 5.0 92 3.0 93 4.0 94 5.0 95 2.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 629120.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.436832303879644 #Duplication Level Percentage of deduplicated Percentage of total 1 73.98211738881028 21.038170656715362 2 9.610363628668706 5.465765977755125 3 3.3690314043965155 2.874137432199836 4 1.7151129240865037 1.9508951441785827 5 1.045672920952811 1.486781274892154 6 0.7769357145760718 1.3256154375776792 7 0.6566328322368834 1.3070790414879256 8 0.5392996735984958 1.2268779503725964 9 0.49852787091570794 1.2758898117636133 >10 7.425986564416146 49.55339376834183 >50 0.31468879408379175 5.488727693003671 >100 0.05609425919497142 2.881785419564759 >500 0.006170368511446856 1.2132657976978611 >1k 0.0033656555516982847 2.9116145944489955 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGACAATCTCGTATGC 4622 0.734677009155646 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGACAATCTCGTATGCCG 4557 0.7243451169888098 No Hit GAATCTGTCTCTTATACACATCTGACGCGGACAATCTCGTATGCCGTCTTC 3948 0.6275432349949136 RNA PCR Primer, Index 36 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGGACAATCTCGTATGCCGTCTTCTGC 2082 0.3309384537131231 RNA PCR Primer, Index 15 (96% over 25bp) CCTGTCTCTTATACACATCTGACGCGGACAATCTCGTATGCCGTCTTCTGC 1729 0.2748283316378433 RNA PCR Primer, Index 36 (96% over 25bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1315 0.20902212614445576 No Hit CTGTCTCTTATACACATCTGACGCGGACAATCTCGTATGCCGTCTTCTGCT 929 0.14766658189216683 RNA PCR Primer, Index 36 (96% over 26bp) GAATGACTGTCTCTTATACACATCTGACGCGGACAATCTCGTATGCCGTCT 923 0.14671286876907427 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 874 0.13892421159715157 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGACAATCT 760 0.12080366225839267 No Hit GAACTGTCTCTTATACACATCTGACGCGGACAATCTCGTATGCCGTCTTCT 717 0.11396871820956256 RNA PCR Primer, Index 15 (95% over 23bp) GAATGATCTGTCTCTTATACACATCTGACGCGGACAATCTCGTATGCCGTC 636 0.10109359104781282 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.358087487283825E-4 0.0 0.0 0.15752161749745677 0.0 2 6.358087487283825E-4 0.0 0.0 0.9421096134282808 0.0 3 6.358087487283825E-4 0.0 0.0 1.2512716174974567 0.0 4 6.358087487283825E-4 0.0 0.0 1.7109613428280772 0.0 5 6.358087487283825E-4 0.0 0.0 3.2448499491353 0.0 6 6.358087487283825E-4 0.0 0.0 3.9691950661241098 0.0 7 6.358087487283825E-4 0.0 0.0 4.669697355035606 0.0 8 6.358087487283825E-4 0.0 0.0 5.576360630722279 0.0 9 6.358087487283825E-4 0.0 0.0 5.889814343845371 0.0 10 6.358087487283825E-4 0.0 0.0 7.365367497456765 0.0 11 6.358087487283825E-4 0.0 0.0 8.36088504577823 0.0 12 6.358087487283825E-4 0.0 0.0 9.92115971515768 0.0 13 6.358087487283825E-4 0.0 0.0 10.315202187182095 0.0 14 6.358087487283825E-4 0.0 0.0 10.493387589013224 0.0 15 7.947609359104782E-4 0.0 0.0 10.850394201424212 0.0 16 7.947609359104782E-4 0.0 0.0 11.3911495422177 0.0 17 7.947609359104782E-4 0.0 0.0 12.047781027466938 0.0 18 7.947609359104782E-4 0.0 0.0 12.781186419125127 0.0 19 7.947609359104782E-4 0.0 0.0 13.31908062054934 0.0 20 9.537131230925738E-4 0.0 0.0 13.752066378433367 0.0 21 9.537131230925738E-4 0.0 0.0 14.27422431332655 0.0 22 9.537131230925738E-4 0.0 0.0 14.846611139369278 0.0 23 9.537131230925738E-4 0.0 0.0 15.40199008138352 0.0 24 9.537131230925738E-4 0.0 0.0 15.83656536113937 0.0 25 9.537131230925738E-4 0.0 0.0 16.212487283825027 0.0 26 9.537131230925738E-4 0.0 0.0 16.580779501525942 0.0 27 0.0011126653102746693 0.0 0.0 16.991353001017295 0.0 28 0.001271617497456765 0.0 0.0 17.38030900305188 0.0 29 0.001271617497456765 0.0 0.0 17.790882502543234 0.0 30 0.001271617497456765 0.0 0.0 18.257566124109868 0.0 31 0.001271617497456765 0.0 0.0 18.684193794506612 0.0 32 0.001271617497456765 0.0 0.0 19.08983977619532 0.0 33 0.001271617497456765 0.0 0.0 19.4948499491353 0.0 34 0.001271617497456765 0.0 0.0 19.89620422177009 0.0 35 0.001271617497456765 0.0 0.0 20.30550610376399 0.0 36 0.001271617497456765 0.0 0.0 20.713377416073246 0.0 37 0.001271617497456765 0.0 0.0 21.133805951169887 0.0 38 0.001271617497456765 0.0 0.0 21.51560910478128 0.0 39 0.001271617497456765 0.0 0.0 21.92665946083418 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCACT 20 7.0308486E-4 45.0 22 GCGACGT 25 3.8887858E-5 45.0 17 CGAGTGT 20 7.0308486E-4 45.0 25 CGACGTT 25 3.8887858E-5 45.0 27 CGACGTC 20 7.0308486E-4 45.0 18 CGACGGC 20 7.0308486E-4 45.0 42 TCGATTA 20 7.0308486E-4 45.0 41 ATCCGGT 20 7.0308486E-4 45.0 11 TTCCCGC 25 3.8887858E-5 45.0 25 TACGCGG 20 7.0308486E-4 45.0 2 TCTACGG 25 3.8887858E-5 45.0 2 AACGCGC 20 7.0308486E-4 45.0 30 ACGTCGC 20 7.0308486E-4 45.0 20 ACGTAAC 25 3.8887858E-5 45.0 11 TCGACGT 20 7.0308486E-4 45.0 26 ATACCGG 20 7.0308486E-4 45.0 2 TACGGGC 80 0.0 42.1875 4 CGAGATA 70 0.0 41.785713 19 ATGGGAC 255 0.0 41.47059 5 GCTACGA 115 0.0 41.086956 10 >>END_MODULE