SRR2935631.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935631.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	522283
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGC	17754	3.3993065062427843	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCG	15745	3.014649146152565	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTC	13724	2.627694181124027	No Hit
GCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC	3805	0.7285322325252784	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCT	3214	0.6153751893130736	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCGAAACTT	2944	0.5636790782008987	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTA	2648	0.5070048230556997	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTC	2507	0.48000796503045284	No Hit
GAACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCT	2468	0.47254074898091647	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1279	0.24488639300915405	No Hit
CCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC	954	0.182659592596351	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATG	808	0.15470539918013798	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	754	0.144366176957703	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTAT	732	0.14015390123745172	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTT	712	0.13632455967358692	No Hit
CTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGCT	684	0.1309634814841762	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCCGAAACTTCGT	640	0.12253893004367364	No Hit
GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCCGAAACT	590	0.11296557613401165	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGAG	20	7.0297474E-4	45.0	1
TATCATA	20	7.0297474E-4	45.0	15
CTATGCG	20	7.0297474E-4	45.0	1
CAAACGG	35	1.2102282E-7	45.0	2
GACCGTA	20	7.0297474E-4	45.0	35
TCGGGTA	35	1.2102282E-7	45.0	27
GCCGGTT	20	7.0297474E-4	45.0	10
ACGGGTC	20	7.0297474E-4	45.0	5
ACGGGTA	20	7.0297474E-4	45.0	5
TATTGCG	20	7.0297474E-4	45.0	1
TTCCACG	20	7.0297474E-4	45.0	14
TGCGACG	25	3.8878723E-5	45.0	1
CATCGTT	20	7.0297474E-4	45.0	36
CGTAAGG	35	1.2102282E-7	45.0	2
AGTTACG	20	7.0297474E-4	45.0	1
CAATGTC	20	7.0297474E-4	45.0	10
CGAGAAT	20	7.0297474E-4	45.0	39
CGGTCTA	20	7.0297474E-4	45.0	31
CGATCGC	20	7.0297474E-4	45.0	34
TTCGAAT	45	3.8380676E-10	45.0	43