##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935631.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 522283 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.883365914647804 33.0 31.0 34.0 30.0 34.0 2 31.907705209627732 33.0 31.0 34.0 30.0 34.0 3 31.955108628846812 33.0 31.0 34.0 30.0 34.0 4 35.66530788863509 37.0 35.0 37.0 35.0 37.0 5 35.670496646454126 37.0 35.0 37.0 35.0 37.0 6 35.573403691102335 37.0 35.0 37.0 33.0 37.0 7 35.79299728308216 37.0 35.0 37.0 35.0 37.0 8 35.46090529463911 37.0 35.0 37.0 33.0 37.0 9 37.21137391031299 39.0 37.0 39.0 34.0 39.0 10 37.04875709146191 39.0 37.0 39.0 33.0 39.0 11 37.05041519635906 39.0 37.0 39.0 33.0 39.0 12 36.85895386217817 39.0 35.0 39.0 33.0 39.0 13 36.60573290725526 39.0 35.0 39.0 32.0 39.0 14 37.71928054330698 40.0 36.0 41.0 32.0 41.0 15 37.64168850986917 40.0 36.0 41.0 32.0 41.0 16 37.73661788723738 40.0 36.0 41.0 33.0 41.0 17 37.494940482458745 39.0 36.0 41.0 32.0 41.0 18 37.51706258867319 39.0 36.0 41.0 32.0 41.0 19 37.41528251924723 39.0 36.0 41.0 32.0 41.0 20 37.15025761895371 39.0 35.0 41.0 31.0 41.0 21 37.48153587231443 39.0 35.0 41.0 32.0 41.0 22 37.51700706322051 39.0 35.0 41.0 32.0 41.0 23 37.390297980213795 39.0 35.0 41.0 32.0 41.0 24 37.357279482579365 39.0 35.0 41.0 32.0 41.0 25 37.40233743009058 39.0 35.0 41.0 33.0 41.0 26 37.23792465004605 39.0 35.0 41.0 32.0 41.0 27 37.145842388130575 39.0 35.0 41.0 32.0 41.0 28 37.02147303281937 39.0 35.0 41.0 31.0 41.0 29 36.980533542160096 39.0 35.0 41.0 31.0 41.0 30 36.88269769454491 39.0 35.0 41.0 31.0 41.0 31 36.90930013038908 39.0 35.0 41.0 31.0 41.0 32 36.572465502419185 39.0 35.0 41.0 30.0 41.0 33 36.436414740667416 39.0 35.0 41.0 30.0 41.0 34 36.3352760859534 39.0 35.0 41.0 30.0 41.0 35 36.19515090477768 39.0 35.0 41.0 30.0 41.0 36 36.1112079083562 39.0 35.0 41.0 29.0 41.0 37 36.20536950274085 39.0 35.0 41.0 30.0 41.0 38 35.84100190892677 39.0 35.0 41.0 27.0 41.0 39 35.93284292232372 39.0 35.0 41.0 28.0 41.0 40 35.76436146686758 39.0 35.0 41.0 27.0 41.0 41 35.558103556883914 38.0 35.0 41.0 26.0 41.0 42 35.79155362131258 39.0 35.0 41.0 27.0 41.0 43 35.716569369479764 39.0 35.0 41.0 28.0 41.0 44 35.85910320649916 39.0 35.0 41.0 28.0 41.0 45 35.845930271519464 39.0 35.0 40.0 28.0 41.0 46 35.69413517192786 38.0 35.0 40.0 28.0 41.0 47 35.444109802540005 38.0 35.0 40.0 27.0 41.0 48 35.485566254310406 38.0 35.0 40.0 27.0 41.0 49 35.43271176737516 38.0 35.0 40.0 27.0 41.0 50 35.25787169025222 38.0 35.0 40.0 26.0 41.0 51 34.3634121730939 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 13.0 10 9.0 11 12.0 12 12.0 13 11.0 14 18.0 15 14.0 16 34.0 17 67.0 18 180.0 19 513.0 20 1246.0 21 2460.0 22 3685.0 23 4526.0 24 5133.0 25 5358.0 26 5636.0 27 5839.0 28 5952.0 29 6792.0 30 8742.0 31 11642.0 32 15632.0 33 20691.0 34 34679.0 35 45823.0 36 36656.0 37 52631.0 38 91156.0 39 156995.0 40 121.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 52.95960236117201 15.618735436535363 17.990246667036836 13.431415535255791 2 24.921737831788512 38.1634094925548 20.851339216478422 16.06351345917826 3 26.5449957207108 37.406540132456925 22.327550389348303 13.720913757483968 4 24.1290641280685 20.567776473674236 38.25473928885298 17.04842010940429 5 34.66339130318237 24.836152047836137 21.02423398808692 19.476222660894575 6 21.865157395511627 41.64983351937551 23.355154198011423 13.12985488710144 7 67.2150922009715 5.64693853715323 22.43649515684026 4.70147410503501 8 65.50299358776755 18.113742932471478 10.543709061945345 5.839554417815629 9 60.76073699507738 7.134063333480125 10.894093815038973 21.21110585640352 10 42.852055303350866 24.21062910337882 18.263278720540395 14.674036872729918 11 37.74352219007703 21.016766772037382 23.297905541631643 17.941805496253945 12 29.948705969752034 17.888386181438033 26.32231950877206 25.840588340037872 13 28.42635123103758 21.28367187903876 32.86647277433882 17.423504115584844 14 20.316763134162898 32.532745657048004 23.928789564278368 23.221701644510734 15 16.00435013201655 22.744565685653182 38.82952345758908 22.421560724741184 16 18.584943411905037 23.978762471686807 28.129577259838058 29.306716856570098 17 18.99161948598748 26.455963529350946 30.85051590804219 23.70190107661938 18 19.612930154724545 24.983390230966737 28.08783743679193 27.315842177516785 19 22.022734800864665 27.07612539561885 24.490553971697338 26.41058583181915 20 27.584279021143708 24.940310138373256 31.21640949446947 16.25900134601356 21 23.22610538730918 33.15156725376855 25.246848930560635 18.375478428361635 22 19.80631190369972 23.26746227619892 30.915806181706085 26.010419638395277 23 23.195279187720068 29.995423936831184 27.528370634311283 19.28092624113747 24 23.35381392846407 25.201471233028837 25.345645942908344 26.099068895598748 25 19.7643806135754 34.54755372087546 23.50162651282925 22.186439152719885 26 18.857783998330408 24.02624630707873 29.540115224887657 27.57585446970321 27 25.004068675411606 27.283101307145742 23.85603207456494 23.856797942877712 28 17.614588259621698 28.57167474338625 30.977841515040694 22.835895481951358 29 22.048582856420754 23.94946800872324 26.620816683675326 27.381132451180683 30 19.956230625925027 30.60428924548568 26.47836517749955 22.961114951089733 31 26.291110375026566 24.533442597212623 21.144475313192274 28.030971714568537 32 27.572790996452113 30.555848074702794 21.528558272047913 20.342802656797176 33 24.335465638360812 27.361794276283163 21.84467041814495 26.45806966721107 34 23.07312319183278 27.644208216618193 23.714537903780133 25.568130687768893 35 20.754456874912645 24.16754901078534 23.44763279677876 31.63036131752326 36 22.357802187702834 28.333681165192047 24.399032708320966 24.909483938784145 37 18.96117622055476 29.398812521181046 26.41058583181915 25.22942542644505 38 23.64101454575393 28.287154665191096 21.779380144481056 26.29245064457392 39 22.152740946957874 32.19691240189705 23.83075842024343 21.819588230901637 40 20.15095264444755 26.40752235856806 26.72574064252522 26.71578435445917 41 17.793992911888765 30.131365562348382 26.658727165157586 25.415914360605267 42 19.44367325760172 24.279365784450192 28.846238533515354 27.43072242443273 43 22.086493337903015 24.51563615894065 27.1427559388301 26.255114564326238 44 21.70681412184582 24.489405169228178 27.757556726908593 26.046223982017413 45 21.001449405781923 22.298830327619317 25.539985027274486 31.159735239324277 46 25.768213784480825 28.47766440799337 23.744598235056475 22.00952357246933 47 17.545085710237554 26.17546425979785 33.97889649864154 22.300553531323057 48 21.912641230903553 26.655663691906494 25.18136718981855 26.250327887371405 49 19.7898457349751 22.362014463423087 33.07842682989873 24.769712971703083 50 21.419422037477766 23.242380088955606 28.478047342149754 26.860150531416878 51 19.063994041544525 23.04765807043308 25.3695793276825 32.51876856033989 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 514.0 1 750.5 2 987.0 3 1789.5 4 2592.0 5 1841.0 6 1090.0 7 1087.0 8 1084.0 9 1138.0 10 1192.0 11 1171.0 12 1150.0 13 1106.0 14 1062.0 15 1035.5 16 1009.0 17 968.0 18 927.0 19 1032.0 20 1137.0 21 1279.0 22 1421.0 23 1717.5 24 2014.0 25 2166.5 26 2900.0 27 3481.0 28 4331.0 29 5181.0 30 5850.0 31 6519.0 32 7541.5 33 8564.0 34 9935.5 35 11307.0 36 11669.0 37 12031.0 38 13684.0 39 15337.0 40 17605.0 41 19873.0 42 21832.5 43 23792.0 44 25855.0 45 27918.0 46 61505.5 47 95093.0 48 69750.5 49 44408.0 50 44396.5 51 44385.0 52 38346.5 53 32308.0 54 30757.5 55 29207.0 56 27792.0 57 26377.0 58 25502.5 59 24628.0 60 24477.5 61 24327.0 62 21182.0 63 18037.0 64 15070.5 65 12104.0 66 9707.0 67 7310.0 68 5641.5 69 3973.0 70 3588.5 71 3204.0 72 2379.5 73 1555.0 74 1349.0 75 1009.0 76 875.0 77 688.0 78 501.0 79 348.0 80 195.0 81 130.0 82 65.0 83 50.0 84 35.0 85 25.0 86 15.0 87 20.5 88 26.0 89 15.5 90 5.0 91 4.0 92 3.0 93 2.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 522283.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.07847443257428 #Duplication Level Percentage of deduplicated Percentage of total 1 74.53704916133113 19.43812530833306 2 9.481397978616736 4.94520789540836 3 3.3054395621919848 2.586024633331296 4 1.703537489343734 1.7770263544312936 5 1.124130331343988 1.4657802052417723 6 0.8341900693300338 1.3052642636958391 7 0.6036770226560152 1.102008306060722 8 0.5497522034765411 1.146935902609148 9 0.4864061558570634 1.141625744942865 >10 6.747499745197487 39.912238837574165 >50 0.561432129272308 9.066280349056974 >100 0.05224335672127637 2.304612504332005 >500 0.005886575405214239 1.1271685137757035 >1k 0.005150753479562459 3.620026219335827 >5k 0.0 0.0 >10k+ 0.0022074657769553395 9.061674961870965 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGC 17754 3.3993065062427843 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCG 15745 3.014649146152565 No Hit GAATCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTC 13724 2.627694181124027 No Hit GCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC 3805 0.7285322325252784 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCT 3214 0.6153751893130736 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCGAAACTT 2944 0.5636790782008987 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTA 2648 0.5070048230556997 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTC 2507 0.48000796503045284 No Hit GAACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCT 2468 0.47254074898091647 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1279 0.24488639300915405 No Hit CCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC 954 0.182659592596351 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATG 808 0.15470539918013798 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 754 0.144366176957703 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTAT 732 0.14015390123745172 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTT 712 0.13632455967358692 No Hit CTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGCT 684 0.1309634814841762 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCCGAAACTTCGT 640 0.12253893004367364 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCCGAAACT 590 0.11296557613401165 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.744012345797202E-4 0.0 0.0 0.13881363169009905 0.0 2 5.744012345797202E-4 0.0 0.0 1.2248148992021566 0.0 3 5.744012345797202E-4 0.0 0.0 1.4781258436518132 0.0 4 5.744012345797202E-4 0.0 0.0 2.260268858071199 0.0 5 5.744012345797202E-4 0.0 0.0 5.69959198365637 0.0 6 5.744012345797202E-4 0.0 0.0 6.309031693545453 0.0 7 7.658683127729603E-4 0.0 0.0 7.391012152415453 0.0 8 7.658683127729603E-4 0.0 0.0 8.492522253261162 0.0 9 7.658683127729603E-4 0.0 0.0 8.75176867713481 0.0 10 7.658683127729603E-4 0.0 0.0 12.41798029037897 0.0 11 7.658683127729603E-4 0.0 0.0 13.21812121014852 0.0 12 7.658683127729603E-4 0.0 0.0 17.465435405709165 0.0 13 7.658683127729603E-4 0.0 0.0 17.933380944813443 0.0 14 7.658683127729603E-4 0.0 0.0 18.204689794613266 0.0 15 7.658683127729603E-4 0.0 0.0 18.97725945512299 0.0 16 7.658683127729603E-4 0.0 0.0 19.49613523702667 0.0 17 7.658683127729603E-4 0.0 0.0 20.02803078024749 0.0 18 7.658683127729603E-4 0.0 0.0 20.573903420176418 0.0 19 7.658683127729603E-4 0.0 0.0 21.58791306628782 0.0 20 9.573353909662003E-4 0.0 0.0 22.055092737079324 0.0 21 9.573353909662003E-4 0.0 0.0 22.460045607458024 0.0 22 9.573353909662003E-4 0.0 0.0 23.03885058483619 0.0 23 0.0011488024691594404 0.0 0.0 23.457972019001193 0.0 24 0.0013402695473526804 0.0 0.0 23.81582398814436 0.0 25 0.0013402695473526804 0.0 0.0 24.10666247991989 0.0 26 0.0013402695473526804 0.0 0.0 24.39788390585181 0.0 27 0.0013402695473526804 0.0 0.0 24.813558932609332 0.0 28 0.0017232037037391607 0.0 0.0 25.128905210393597 0.0 29 0.0017232037037391607 0.0 0.0 25.4319975951735 0.0 30 0.0017232037037391607 0.0 0.0 25.791764235098597 0.0 31 0.0017232037037391607 0.0 0.0 26.12242787913832 0.0 32 0.0017232037037391607 0.0 0.0 26.46630275157338 0.0 33 0.0019146707819324006 0.0 0.0 26.77935142441933 0.0 34 0.0019146707819324006 0.0 0.0 27.110206535537248 0.0 35 0.0019146707819324006 0.0 0.0 27.436274969700335 0.0 36 0.0019146707819324006 0.0 0.0 27.772682626085857 0.0 37 0.0019146707819324006 0.0 0.0 28.10736707876764 0.0 38 0.0019146707819324006 0.0 0.0 28.441668597293038 0.0 39 0.0019146707819324006 0.0 0.0 28.81062565697141 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 20 7.0297474E-4 45.0 1 TATCATA 20 7.0297474E-4 45.0 15 CTATGCG 20 7.0297474E-4 45.0 1 CAAACGG 35 1.2102282E-7 45.0 2 GACCGTA 20 7.0297474E-4 45.0 35 TCGGGTA 35 1.2102282E-7 45.0 27 GCCGGTT 20 7.0297474E-4 45.0 10 ACGGGTC 20 7.0297474E-4 45.0 5 ACGGGTA 20 7.0297474E-4 45.0 5 TATTGCG 20 7.0297474E-4 45.0 1 TTCCACG 20 7.0297474E-4 45.0 14 TGCGACG 25 3.8878723E-5 45.0 1 CATCGTT 20 7.0297474E-4 45.0 36 CGTAAGG 35 1.2102282E-7 45.0 2 AGTTACG 20 7.0297474E-4 45.0 1 CAATGTC 20 7.0297474E-4 45.0 10 CGAGAAT 20 7.0297474E-4 45.0 39 CGGTCTA 20 7.0297474E-4 45.0 31 CGATCGC 20 7.0297474E-4 45.0 34 TTCGAAT 45 3.8380676E-10 45.0 43 >>END_MODULE