##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935630.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 672860 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05028980768659 33.0 31.0 34.0 30.0 34.0 2 32.08459560681271 33.0 31.0 34.0 30.0 34.0 3 32.1123710727343 33.0 31.0 34.0 30.0 34.0 4 35.76531224920489 37.0 35.0 37.0 35.0 37.0 5 35.7811060250275 37.0 35.0 37.0 35.0 37.0 6 35.700726748506376 37.0 35.0 37.0 35.0 37.0 7 35.9247882174598 37.0 35.0 37.0 35.0 37.0 8 35.67691793240793 37.0 35.0 37.0 35.0 37.0 9 37.468055761971286 39.0 37.0 39.0 35.0 39.0 10 37.21234134886901 39.0 37.0 39.0 34.0 39.0 11 37.198971554260915 39.0 37.0 39.0 34.0 39.0 12 37.01839610022888 39.0 37.0 39.0 33.0 39.0 13 36.838670748744164 39.0 35.0 39.0 33.0 39.0 14 37.89735011740927 40.0 37.0 41.0 33.0 41.0 15 37.93685313438159 40.0 37.0 41.0 33.0 41.0 16 37.95909847516571 40.0 36.0 41.0 33.0 41.0 17 37.84723419433463 40.0 36.0 41.0 33.0 41.0 18 37.83316588889219 40.0 36.0 41.0 33.0 41.0 19 37.71074369110959 40.0 36.0 41.0 33.0 41.0 20 37.56331034687751 40.0 36.0 41.0 32.0 41.0 21 37.7409684035312 40.0 36.0 41.0 33.0 41.0 22 37.82565466813304 40.0 36.0 41.0 33.0 41.0 23 37.77614511191035 40.0 36.0 41.0 33.0 41.0 24 37.76701691287935 40.0 36.0 41.0 33.0 41.0 25 37.67137443153108 40.0 36.0 41.0 33.0 41.0 26 37.592661177659544 40.0 35.0 41.0 33.0 41.0 27 37.51906488719793 40.0 35.0 41.0 33.0 41.0 28 37.38401450524626 40.0 35.0 41.0 32.0 41.0 29 37.33150729720893 40.0 35.0 41.0 32.0 41.0 30 37.18225336622774 40.0 35.0 41.0 32.0 41.0 31 37.158468329221535 40.0 35.0 41.0 32.0 41.0 32 36.97572154682995 40.0 35.0 41.0 31.0 41.0 33 36.899249472401394 40.0 35.0 41.0 31.0 41.0 34 36.714059388282855 40.0 35.0 41.0 31.0 41.0 35 36.642843979431085 40.0 35.0 41.0 31.0 41.0 36 36.46667360223523 39.0 35.0 41.0 30.0 41.0 37 36.449112742621054 39.0 35.0 41.0 30.0 41.0 38 36.23225633861427 39.0 35.0 41.0 30.0 41.0 39 36.20710251761139 39.0 35.0 41.0 30.0 41.0 40 36.082626400737155 39.0 35.0 41.0 29.0 41.0 41 35.94869363612044 39.0 35.0 41.0 28.0 41.0 42 35.98159201022501 39.0 35.0 41.0 29.0 41.0 43 35.98970513925631 39.0 35.0 41.0 29.0 41.0 44 36.00180572481646 39.0 35.0 41.0 29.0 41.0 45 36.01780310911631 39.0 35.0 41.0 29.0 41.0 46 35.908856225663584 39.0 35.0 41.0 29.0 41.0 47 35.683559730107305 38.0 35.0 41.0 28.0 41.0 48 35.620769550872396 38.0 35.0 40.0 28.0 41.0 49 35.62744255863032 38.0 35.0 40.0 28.0 41.0 50 35.48341111078084 38.0 35.0 40.0 28.0 41.0 51 34.369234313230095 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 13.0 10 17.0 11 14.0 12 18.0 13 19.0 14 18.0 15 29.0 16 60.0 17 112.0 18 284.0 19 675.0 20 1707.0 21 2822.0 22 3757.0 23 4589.0 24 4972.0 25 5746.0 26 6591.0 27 7055.0 28 7725.0 29 8562.0 30 10260.0 31 13450.0 32 18082.0 33 25097.0 34 44532.0 35 52307.0 36 45986.0 37 67263.0 38 117305.0 39 223648.0 40 140.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.113188479029816 17.22661474898196 20.53369200130785 13.12650477068038 2 28.381535534880957 32.846060101655624 22.668460006539252 16.103944356924174 3 29.29777368248967 31.648782807716312 24.177094789406414 14.8763487203876 4 26.155961121184202 22.505721844068603 33.91121481437446 17.42710222037274 5 31.442350563267247 25.96557976399251 23.52956038403234 19.062509288707904 6 22.895401718039412 39.342062241773924 23.996670927087358 13.765865113099307 7 72.8332788395803 5.696281544452041 17.17058526290759 4.299854353060072 8 73.49195969443866 12.96599589810659 9.128347650328449 4.413696757126297 9 68.34675861248996 6.736319590999614 9.953333531492435 14.963588265017982 10 43.414380406028 22.95752459649853 18.35478405611866 15.273310941354815 11 34.72401391076896 23.495377938947183 23.56002734595607 18.220580804327795 12 27.66310971078679 20.298427607526083 27.98799155842226 24.05047112326487 13 27.662663852807416 21.488422554468983 32.6509229260173 18.1979906667063 14 21.181077787355466 29.5456707190203 28.420771037065663 20.85248045655857 15 18.569241744196415 23.24421127723449 36.067235383289244 22.11931159527985 16 22.828225782480754 24.361382754213356 27.071010314181255 25.739381149124636 17 23.34408346461374 26.070356389144845 28.874803079392443 21.710757066848974 18 23.209731593496418 24.37460987426805 28.313319264037094 24.102339268198435 19 23.594209791041227 25.579615373183128 26.12594001723984 24.7002348185358 20 26.07273429836816 26.134114080194987 29.552209969384418 18.240941652052435 21 24.223909877240438 29.887792408524806 27.772642154385757 18.115655559849003 22 22.44255863032429 22.36081800077282 32.14858960259192 23.048033766310972 23 24.007965995898108 26.867401836934874 29.228368457034154 19.896263710132867 24 22.902238207056445 25.995006390631037 26.783580536813005 24.31917486549951 25 22.06432244449068 31.150462206105285 25.604137562048567 21.181077787355466 26 21.230716642392178 24.603632256338614 28.924887792408526 25.240763308860686 27 24.900127812620752 26.036173944059687 26.56258359837113 22.501114644948427 28 19.85034033825759 27.02642451624409 30.0587046339506 23.06453051154772 29 25.135094967749605 24.48830365900782 28.525101804238624 21.851499569003956 30 24.50197663704188 27.41001099783016 28.452872811580416 19.635139553547543 31 25.57084683292215 23.5699848408287 26.73958921618167 24.119579110067473 32 27.358885949528876 28.688434444015098 24.810956216746426 19.141723389709597 33 25.277026424516247 25.69152572600541 24.941295366049403 24.090152483428945 34 27.438397289183484 24.920637279671848 26.16874238325952 21.472223047885148 35 24.98335463543679 27.483577564426476 25.061677020479745 22.471390779656986 36 25.444371786107066 26.905745623160836 26.107659840085606 21.542222750646495 37 24.38293255654965 27.682430223226227 27.528609220343014 20.406027999881104 38 21.662158547097466 28.167820943435483 26.444133995184732 23.72588651428232 39 24.91469250661356 27.110691674345333 25.22188865440062 22.75272716464049 40 23.759028624082276 27.42829117498439 26.630056772582705 22.182623428350624 41 22.886930416431355 25.39815117557887 25.100318045358616 26.61460036263116 42 21.031715364265967 26.996106173646822 29.641827423238116 22.33035103884909 43 23.147460095710844 24.077519840680083 26.09993163510983 26.675088428499244 44 23.672086318104807 23.49166245578575 28.919537496656066 23.916713729453377 45 21.329994352465594 23.370240466070207 27.517908628838093 27.781856552626106 46 26.31959099961359 26.120143863508012 25.480337663109708 22.07992747376869 47 20.438427013048777 25.713967244300452 32.34610468745356 21.501501055197217 48 22.92661177659543 26.94067116487828 26.613114169366586 23.519602889159707 49 22.261540290699404 24.192551199357965 31.062330945516152 22.483577564426476 50 22.27179502422495 24.393038670748744 28.58677882471837 24.74838748030794 51 22.368992063727966 23.62081265047707 27.19020301399994 26.819992271795023 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 640.0 1 956.5 2 1273.0 3 2509.5 4 3746.0 5 2599.0 6 1452.0 7 1466.5 8 1481.0 9 1465.5 10 1450.0 11 1404.5 12 1359.0 13 1371.5 14 1384.0 15 1406.5 16 1429.0 17 1449.0 18 1469.0 19 1556.0 20 1643.0 21 1649.5 22 1656.0 23 2177.5 24 2699.0 25 2905.0 26 3952.0 27 4793.0 28 5987.0 29 7181.0 30 7921.5 31 8662.0 32 9910.0 33 11158.0 34 13596.5 35 16035.0 36 17502.0 37 18969.0 38 21083.5 39 23198.0 40 25051.5 41 26905.0 42 29336.0 43 31767.0 44 35586.5 45 39406.0 46 66148.0 47 92890.0 48 74390.5 49 55891.0 50 55610.0 51 55329.0 52 51074.5 53 46820.0 54 43728.5 55 40637.0 56 39459.5 57 38282.0 58 35609.0 59 32936.0 60 31274.5 61 29613.0 62 25866.0 63 22119.0 64 19660.0 65 17201.0 66 13918.5 67 10636.0 68 8936.0 69 7236.0 70 5830.5 71 4425.0 72 3562.5 73 2700.0 74 2126.0 75 1295.5 76 1039.0 77 674.0 78 309.0 79 234.5 80 160.0 81 146.0 82 132.0 83 96.5 84 61.0 85 36.5 86 12.0 87 8.0 88 4.0 89 4.0 90 4.0 91 4.0 92 4.0 93 2.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 672860.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.58346197788706 #Duplication Level Percentage of deduplicated Percentage of total 1 74.19127129039525 19.722608394393255 2 8.11323615715259 4.313558098025687 3 3.031824383227243 2.417891646454569 4 1.682370808511972 1.7889296168314046 5 1.198471032678466 1.5929754564403513 6 0.8966886447176532 1.4302253095712885 7 0.8017487324301589 1.491927986106339 8 0.646737002685338 1.3754006816462656 9 0.6003244569950897 1.4362832139232196 >10 8.56181804324428 50.65256937064171 >50 0.23277737031886722 3.803993287380101 >100 0.033735850770850034 1.6183039419435779 >500 0.002811320897570836 0.44497005958862396 >1k 0.004498113436113338 2.4063060091761024 >5k 0.0 0.0 >10k+ 0.0016867925385425015 5.504056927877557 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGC 12924 1.9207561751330142 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCG 12535 1.8629432571411586 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTC 11365 1.68905864518622 No Hit GCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 2635 0.39161192521475496 TruSeq Adapter, Index 14 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCT 2304 0.3424189281574176 No Hit GAACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCT 2299 0.34167583152513153 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTAAGACT 2264 0.3364741550991291 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1977 0.2938204084059091 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTA 1744 0.2591921053413786 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTC 1584 0.2354130131082246 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTT 1292 0.19201616978271854 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 749 0.11131587551645215 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.4585797937163747E-4 0.0 0.0 0.0867936866510121 0.0 2 4.4585797937163747E-4 0.0 0.0 0.6753262194215736 0.0 3 4.4585797937163747E-4 0.0 0.0 0.8481704960913117 0.0 4 4.4585797937163747E-4 0.0 0.0 1.3873614124780786 0.0 5 4.4585797937163747E-4 0.0 0.0 3.60312695062866 0.0 6 4.4585797937163747E-4 0.0 0.0 4.2356508040305565 0.0 7 4.4585797937163747E-4 0.0 0.0 4.890764795053949 0.0 8 5.9447730582885E-4 0.0 0.0 5.565496537169693 0.0 9 5.9447730582885E-4 0.0 0.0 5.758850280890527 0.0 10 5.9447730582885E-4 0.0 0.0 8.039265226049995 0.0 11 5.9447730582885E-4 0.0 0.0 8.595250126326427 0.0 12 5.9447730582885E-4 0.0 0.0 11.050590018726036 0.0 13 5.9447730582885E-4 0.0 0.0 11.35689445055435 0.0 14 5.9447730582885E-4 0.0 0.0 11.538210028832149 0.0 15 5.9447730582885E-4 0.0 0.0 11.959248580685433 0.0 16 5.9447730582885E-4 0.0 0.0 12.307909520554054 0.0 17 5.9447730582885E-4 0.0 0.0 12.663109710786792 0.0 18 7.430966322860624E-4 0.0 0.0 13.04803376631097 0.0 19 7.430966322860624E-4 0.0 0.0 13.663466397170287 0.0 20 7.430966322860624E-4 0.0 0.0 13.988794102785127 0.0 21 7.430966322860624E-4 0.0 0.0 14.280979698600007 0.0 22 7.430966322860624E-4 0.0 0.0 14.695924858068544 0.0 23 7.430966322860624E-4 0.0 0.0 14.972951282584788 0.0 24 7.430966322860624E-4 0.0 0.0 15.227387569479536 0.0 25 7.430966322860624E-4 0.0 0.0 15.473055316113307 0.0 26 7.430966322860624E-4 0.0 0.0 15.72035787533811 0.0 27 7.430966322860624E-4 0.0 0.0 16.098445441845257 0.0 28 7.430966322860624E-4 0.0 0.0 16.330588829771422 0.0 29 7.430966322860624E-4 0.0 0.0 16.60583182237018 0.0 30 7.430966322860624E-4 0.0 0.0 16.962220967214577 0.0 31 0.0010403352852004874 0.0 0.0 17.22557441369676 0.0 32 0.0010403352852004874 0.0 0.0 17.487293047587908 0.0 33 0.0010403352852004874 0.0 0.0 17.74737686888803 0.0 34 0.0010403352852004874 0.0 0.0 18.01281098594061 0.0 35 0.0010403352852004874 0.0 0.0 18.295930802841603 0.0 36 0.0010403352852004874 0.0 0.0 18.56136491989418 0.0 37 0.0010403352852004874 0.0 0.0 18.8440388788158 0.0 38 0.0010403352852004874 0.0 0.0 19.155247748417203 0.0 39 0.0010403352852004874 0.0 0.0 19.64063846862646 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGACGT 20 7.0312E-4 45.0 44 TATAGCG 30 2.1641554E-6 44.999996 1 ACACTCG 105 0.0 42.85714 40 CCGATGA 1355 0.0 41.84502 18 CGATGAA 1405 0.0 41.156586 19 GATGAAT 1490 0.0 41.073826 20 TACGGCT 1385 0.0 40.938625 7 ACGGCTG 1385 0.0 40.938625 8 GCGAACC 55 6.002665E-11 40.909092 33 CCACCGA 1805 0.0 40.761772 15 CGTTTTT 1075 0.0 40.186047 1 AACGGGA 225 0.0 40.0 4 CACCGAT 1555 0.0 39.790997 16 TACGAAA 85 0.0 39.705883 20 ATGAATG 1555 0.0 39.212215 21 CTCGAAT 190 0.0 39.078945 43 TGATACC 1435 0.0 39.04181 4 ACATGCG 35 6.2444287E-6 38.571426 1 AGTTACG 35 6.2444287E-6 38.571426 1 ACCGATG 1480 0.0 38.158783 17 >>END_MODULE