##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935627.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 351870 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.878435217551935 33.0 31.0 34.0 30.0 34.0 2 31.888237133032085 33.0 31.0 34.0 30.0 34.0 3 31.932634211498566 33.0 31.0 34.0 30.0 34.0 4 35.64695199931793 37.0 35.0 37.0 33.0 37.0 5 35.70110836388439 37.0 35.0 37.0 35.0 37.0 6 35.63026970187853 37.0 35.0 37.0 33.0 37.0 7 35.90819620882712 37.0 35.0 37.0 35.0 37.0 8 35.62692471651462 37.0 35.0 37.0 33.0 37.0 9 37.45209594452497 39.0 37.0 39.0 35.0 39.0 10 37.09607525506579 39.0 37.0 39.0 34.0 39.0 11 37.09851081365277 39.0 37.0 39.0 34.0 39.0 12 37.025907295307924 39.0 37.0 39.0 33.0 39.0 13 36.85675675675676 39.0 35.0 39.0 33.0 39.0 14 37.9071702617444 40.0 37.0 41.0 33.0 41.0 15 37.9279961349362 40.0 37.0 41.0 33.0 41.0 16 37.88621365845341 40.0 36.0 41.0 33.0 41.0 17 37.86175576207122 40.0 36.0 41.0 33.0 41.0 18 37.840716741978575 39.0 36.0 41.0 33.0 41.0 19 37.73904567027596 39.0 36.0 41.0 33.0 41.0 20 37.79456333304914 40.0 36.0 41.0 33.0 41.0 21 37.867124222013814 40.0 36.0 41.0 33.0 41.0 22 37.97752294881632 40.0 36.0 41.0 34.0 41.0 23 37.99790547645437 40.0 36.0 41.0 34.0 41.0 24 37.88781936510643 40.0 36.0 41.0 33.0 41.0 25 37.717151220621254 39.0 36.0 41.0 33.0 41.0 26 37.789660954329726 40.0 36.0 41.0 33.0 41.0 27 37.80273964816551 40.0 36.0 41.0 33.0 41.0 28 37.686492170403845 40.0 36.0 41.0 33.0 41.0 29 37.69056185523063 40.0 36.0 41.0 33.0 41.0 30 37.604692073777244 40.0 36.0 41.0 33.0 41.0 31 37.539662375309064 40.0 36.0 41.0 33.0 41.0 32 37.51280586580271 40.0 36.0 41.0 33.0 41.0 33 37.46666666666667 40.0 36.0 41.0 33.0 41.0 34 37.40873618097593 40.0 36.0 41.0 33.0 41.0 35 37.40123056810754 40.0 36.0 41.0 33.0 41.0 36 37.34319208798704 40.0 36.0 41.0 33.0 41.0 37 37.2925995396027 40.0 36.0 41.0 33.0 41.0 38 37.19415409099952 40.0 35.0 41.0 32.0 41.0 39 37.15651803222781 39.0 35.0 41.0 32.0 41.0 40 37.10608179157075 39.0 35.0 41.0 32.0 41.0 41 36.85401995054992 39.0 35.0 41.0 31.0 41.0 42 37.02487850626652 39.0 35.0 41.0 32.0 41.0 43 37.020197800323984 39.0 35.0 41.0 32.0 41.0 44 36.92643305766334 39.0 35.0 41.0 31.0 41.0 45 36.94237076192912 39.0 35.0 41.0 32.0 41.0 46 36.86012163583141 39.0 35.0 41.0 31.0 41.0 47 36.66531389433597 39.0 35.0 41.0 31.0 41.0 48 36.63508682183761 39.0 35.0 41.0 31.0 41.0 49 36.70443629749624 39.0 35.0 41.0 31.0 41.0 50 36.57032142552647 39.0 35.0 41.0 31.0 41.0 51 35.44878506266519 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 2.0 11 1.0 12 5.0 13 2.0 14 6.0 15 9.0 16 15.0 17 31.0 18 57.0 19 142.0 20 302.0 21 553.0 22 786.0 23 1177.0 24 1498.0 25 1986.0 26 2528.0 27 2776.0 28 3228.0 29 3742.0 30 4879.0 31 6438.0 32 9238.0 33 12898.0 34 22256.0 35 30514.0 36 24457.0 37 36090.0 38 68687.0 39 117494.0 40 70.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.61502827748885 17.761957541137352 22.08258731918038 12.540426862193424 2 27.486571745246824 32.13459516298633 24.006593344132774 16.37223974763407 3 27.469519993179297 31.945604910904596 26.120158012902493 14.464717083013612 4 25.828288856680025 22.81808622502629 33.751101258987696 17.602523659305994 5 29.304288515644984 26.901412453462925 24.104356722653254 19.68994230823884 6 22.322164435729107 37.448205303094895 26.012731974877084 14.216898286298917 7 71.37238184556797 5.858697814533777 17.525790775002132 5.243129564896126 8 69.94657117685509 11.966351209253418 11.263250632335806 6.823826981555688 9 65.68903288146191 6.756188365021172 12.228948191093302 15.325830562423622 10 38.58612555773439 26.098843322818087 21.152698439764688 14.162332679682837 11 29.564327734674738 23.382215022593574 27.72614886179555 19.32730838093614 12 25.18515360786654 19.3216244635803 32.66263108534402 22.83059084320914 13 22.16727768778242 24.972859294625856 35.805553187256656 17.054309830335068 14 18.163526302327565 32.71492312501776 28.20501889902521 20.916531673629464 15 15.0646545599227 25.211583823571203 41.08505982323017 18.638701793275924 16 16.572313638559695 27.03470031545741 31.076249751328618 25.316736294654273 17 16.723505840225084 25.671412737658795 32.279250859692496 25.325830562423622 18 17.716486202290618 25.8615397732117 32.792508596925 23.629465427572683 19 19.03401824537471 26.9562622559468 29.267911444567595 24.74180805411089 20 21.499985790206612 27.067098644385712 33.33958564242476 18.09332992298292 21 20.461818285162135 31.167192429022084 30.31687839258817 18.054110893227612 22 16.4430045187143 25.59183789467701 30.78352800750277 27.18162957910592 23 17.366356893170774 30.05968113223634 30.570096910790916 22.00386506380197 24 21.59433881831358 23.793446443288715 28.777957768494044 25.834256969903656 25 16.474266064171427 32.450620967971126 27.21289112456305 23.8622218432944 26 16.440162560036377 26.574303009634242 30.79574842981783 26.18978600051155 27 20.367749452922954 28.81291386023247 28.342285503168785 22.47705118367579 28 14.667917128484953 27.8392588171768 33.917355841646064 23.57546821269219 29 18.94790689743371 25.15218688720266 28.65802711228579 27.241879103077842 30 17.642026884929095 27.751442294029044 31.20527467530622 23.40125614573564 31 19.15139113877284 31.536078665416206 24.29931508795862 25.013215107852332 32 20.692301133941513 31.681586949725748 24.291357603660444 23.334754312672292 33 17.730411799812433 26.54986216500412 25.12859863017592 30.59112740500753 34 17.979083184130502 29.23153437349021 26.239520277375167 26.54986216500412 35 15.338050984738683 25.513399835166396 27.773893767584617 31.3746554125103 36 17.18702930059397 27.50390769318214 25.70636882939722 29.60269417682667 37 16.11447409554665 29.44866001648336 32.1752351720806 22.261630715889392 38 15.98601756330463 30.16483360331941 24.20212010117373 29.647028732202234 39 19.217040384232813 30.624662517406996 26.389575695569384 23.768721402790803 40 18.111518458521616 24.342512859863017 28.41816579986927 29.1278028817461 41 16.017847500497343 28.56282149657544 25.315315315315317 30.104015687611902 42 17.941285133714153 23.792878051553128 29.927245857845225 28.338590956887487 43 20.670418052121523 24.048654332566006 26.11305311620769 29.167874499104784 44 18.75920084121977 25.604058316992074 29.065563986699633 26.57117685508853 45 17.65794185352545 24.59942592434706 27.069088015460256 30.673544206667238 46 22.970699406030636 27.36720948077415 25.627646574018815 24.0344445391764 47 15.510842072356269 23.535680791201298 35.4198993946628 25.533577741779634 48 18.41816579986927 25.11524142438969 27.589450649387558 28.877142126353483 49 17.56500980475744 21.107511296785745 34.8779378747833 26.44954102367352 50 19.400915110694292 22.144826214226846 30.0 28.454258675078865 51 18.212407991587803 22.444937050615284 26.652741069144852 32.689913888652065 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 646.0 1 597.5 2 549.0 3 796.0 4 1043.0 5 783.5 6 524.0 7 554.0 8 584.0 9 584.5 10 585.0 11 612.0 12 639.0 13 741.5 14 844.0 15 778.0 16 712.0 17 662.0 18 612.0 19 974.5 20 1337.0 21 1204.5 22 1072.0 23 1342.5 24 1613.0 25 1745.5 26 2357.5 27 2837.0 28 3397.5 29 3958.0 30 4455.5 31 4953.0 32 6441.5 33 7930.0 34 8110.5 35 8291.0 36 9434.5 37 10578.0 38 11723.5 39 12869.0 40 14819.5 41 16770.0 42 19323.5 43 21877.0 44 24511.5 45 27146.0 46 45313.0 47 63480.0 48 53226.0 49 42972.0 50 41131.5 51 39291.0 52 31237.0 53 23183.0 54 19277.0 55 15371.0 56 13311.0 57 11251.0 58 9999.0 59 8747.0 60 7895.5 61 7044.0 62 6109.0 63 5174.0 64 3948.0 65 2722.0 66 2041.0 67 1360.0 68 1083.0 69 806.0 70 546.0 71 286.0 72 250.0 73 214.0 74 145.0 75 52.0 76 28.0 77 17.5 78 7.0 79 6.5 80 6.0 81 4.5 82 3.0 83 2.0 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 351870.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.224542645300765 #Duplication Level Percentage of deduplicated Percentage of total 1 69.16506544214465 20.213174045789746 2 13.054485368871834 7.630227287500997 3 4.908446644899418 4.303413248881395 4 2.473257160163706 2.891192373999988 5 1.438632918163993 2.1021694533908555 6 0.9474273307689505 1.66128782588284 7 0.7257940614914751 1.4847699651234563 8 0.5401025003669389 1.2627398843845743 9 0.48120036985891373 1.2656574656888695 >10 5.977067650256536 38.961126382062744 >50 0.21963502305530924 3.9790309993718327 >100 0.05690543779160285 3.355830367706029 >500 9.983410138877692E-4 0.23019910973048657 >1k 0.007986728111102154 3.8669949307577554 >5k 0.0029950230416633077 6.792186659728425 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCTAACACCTCGTATGC 8378 2.3809929803620657 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTAACACCTCGTATGCCG 7761 2.2056441299343508 No Hit GAATCTGTCTCTTATACACATCTGACGCCTAACACCTCGTATGCCGTCTTC 7141 2.0294426919032595 No Hit GCTGTCTCTTATACACATCTGACGCCTAACACCTCGTATGCCGTCTTCTGC 3539 1.005769176116179 Illumina PCR Primer Index 11 (95% over 23bp) GAATGACTGTCTCTTATACACATCTGACGCCTAACACCTCGTATGCCGTCT 1758 0.4996163355784807 No Hit CCTGTCTCTTATACACATCTGACGCCTAACACCTCGTATGCCGTCTTCTGC 1690 0.4802910165686191 Illumina PCR Primer Index 11 (95% over 23bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTAACACCT 1479 0.4203256884644897 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTAACACCTCGTATGCCGTC 1214 0.3450137834995879 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTAACACCTCGTA 1197 0.3401824537471225 No Hit CTGTCTCTTATACACATCTGACGCCTAACACCTCGTATGCCGTCTTCTGCT 1189 0.33790888680478587 Illumina PCR Primer Index 11 (95% over 24bp) GAACTGTCTCTTATACACATCTGACGCCTAACACCTCGTATGCCGTCTTCT 1188 0.33762469093699377 Illumina PCR Primer Index 11 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCTAACACCTCGTATGCCGTCTTCTGC 789 0.22423053968795292 Illumina PCR Primer Index 11 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 497 0.1412453462926649 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTAACACCTCGTATGCCGTCTT 453 0.12874072810981327 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTAACACCTCGTATGCC 444 0.12618296529968456 No Hit ACTGTCTCTTATACACATCTGACGCCTAACACCTCGTATGCCGTCTTCTGC 432 0.12277261488617955 Illumina PCR Primer Index 11 (95% over 23bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCCTAACACCTCGTATG 384 0.1091312132321596 No Hit AAAGAGAGGGATTGTAACTAGAATTTCTCTCTCTGTGGAGTCATTTTGTAA 356 0.1011737289339813 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0014209793389604116 0.0 0.0 0.3580867934180237 0.0 2 0.0014209793389604116 0.0 0.0 2.2872083439906783 0.0 3 0.0014209793389604116 0.0 0.0 2.913576036604428 0.0 4 0.0014209793389604116 0.0 0.0 3.997214880495638 0.0 5 0.0014209793389604116 0.0 0.0 7.879330434535482 0.0 6 0.0014209793389604116 0.0 0.0 9.090573223065336 0.0 7 0.0014209793389604116 0.0 0.0 10.6496717537727 0.0 8 0.0014209793389604116 0.0 0.0 12.6094864580669 0.0 9 0.0014209793389604116 0.0 0.0 13.190382811833915 0.0 10 0.0014209793389604116 0.0 0.0 16.685423593940943 0.0 11 0.0014209793389604116 0.0 0.0 18.44829056185523 0.0 12 0.0014209793389604116 0.0 0.0 22.38156137209765 0.0 13 0.0014209793389604116 0.0 0.0 23.131838463068746 0.0 14 0.0014209793389604116 0.0 0.0 23.455253360616137 0.0 15 0.0014209793389604116 0.0 0.0 24.2461704606815 0.0 16 0.0014209793389604116 0.0 0.0 25.327251541762582 0.0 17 0.0014209793389604116 0.0 0.0 26.498991104669336 0.0 18 0.0014209793389604116 0.0 0.0 27.845795322136016 0.0 19 0.0014209793389604116 0.0 0.0 29.05817489413704 0.0 20 0.0014209793389604116 0.0 0.0 29.85534430329383 0.0 21 0.0014209793389604116 0.0 0.0 30.641714269474523 0.0 22 0.0014209793389604116 0.0 0.0 31.56023531417853 0.0 23 0.0017051752067524938 0.0 0.0 32.459715235740475 0.0 24 0.0017051752067524938 0.0 0.0 33.12956489612641 0.0 25 0.0017051752067524938 0.0 0.0 33.759911330889246 0.0 26 0.0017051752067524938 0.0 0.0 34.360985591269504 0.0 27 0.0017051752067524938 0.0 0.0 34.98280614999858 0.0 28 0.0017051752067524938 0.0 0.0 35.54153522607781 0.0 29 0.0017051752067524938 0.0 0.0 36.108221786455225 0.0 30 0.0017051752067524938 0.0 0.0 36.73458947906897 0.0 31 0.001989371074544576 0.0 0.0 37.339358285730526 0.0 32 0.001989371074544576 0.0 0.0 37.86199448660017 0.0 33 0.001989371074544576 0.0 0.0 38.418734191604855 0.0 34 0.001989371074544576 0.0 0.0 38.973484525535 0.0 35 0.001989371074544576 0.0 0.0 39.54244465285475 0.0 36 0.001989371074544576 0.0 0.0 40.06422826612101 0.0 37 0.001989371074544576 0.0 0.0 40.574928240543386 0.0 38 0.001989371074544576 0.0 0.0 41.11404780174496 0.0 39 0.001989371074544576 0.0 0.0 41.66652456873277 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAG 20 7.026607E-4 45.0 1 AACGTTC 45 3.8380676E-10 45.0 10 CGGGTTG 20 7.026607E-4 45.0 6 CCGGGTA 20 7.026607E-4 45.0 5 CCGGGCT 40 6.7921064E-9 45.0 5 GATGTAC 20 7.026607E-4 45.0 9 GGTCGGA 20 7.026607E-4 45.0 44 CACGGGT 35 1.2087185E-7 45.0 4 CGTGCGG 35 1.2087185E-7 45.0 2 CGTTGTG 20 7.026607E-4 45.0 20 CGCATGG 20 7.026607E-4 45.0 2 TAGCGAG 20 7.026607E-4 45.0 1 CGCGCGG 20 7.026607E-4 45.0 2 CGTCTGG 20 7.026607E-4 45.0 2 GTTAGCG 20 7.026607E-4 45.0 1 GGTCACG 20 7.026607E-4 45.0 7 CGATTGA 20 7.026607E-4 45.0 10 TACGGGT 20 7.026607E-4 45.0 4 GCGTTGT 20 7.026607E-4 45.0 19 ACGGGCT 45 3.8380676E-10 45.0 5 >>END_MODULE