##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935623.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 705657 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17435949760294 33.0 31.0 34.0 30.0 34.0 2 32.18931010391734 33.0 31.0 34.0 30.0 34.0 3 32.205803952911964 34.0 31.0 34.0 30.0 34.0 4 35.843807969027445 37.0 35.0 37.0 35.0 37.0 5 35.90873753112348 37.0 35.0 37.0 35.0 37.0 6 35.85332250654355 37.0 35.0 37.0 35.0 37.0 7 36.09133899330695 37.0 35.0 37.0 35.0 37.0 8 35.889855836475796 37.0 35.0 37.0 35.0 37.0 9 37.708475930940956 39.0 38.0 39.0 35.0 39.0 10 37.3772385167298 39.0 37.0 39.0 34.0 39.0 11 37.401267187883064 39.0 37.0 39.0 35.0 39.0 12 37.27175950922332 39.0 37.0 39.0 34.0 39.0 13 37.21275208777069 39.0 37.0 39.0 34.0 39.0 14 38.38496323284542 40.0 38.0 41.0 34.0 41.0 15 38.46104552211627 40.0 38.0 41.0 34.0 41.0 16 38.27697025608759 40.0 37.0 41.0 34.0 41.0 17 38.29135401476921 40.0 37.0 41.0 34.0 41.0 18 38.207773748435855 40.0 37.0 41.0 34.0 41.0 19 38.07578186002548 40.0 37.0 41.0 34.0 41.0 20 38.19232856756186 40.0 37.0 41.0 34.0 41.0 21 38.16489739349287 40.0 37.0 41.0 34.0 41.0 22 38.25457410611671 40.0 37.0 41.0 34.0 41.0 23 38.279494145172514 40.0 37.0 41.0 34.0 41.0 24 38.21698785670659 40.0 37.0 41.0 34.0 41.0 25 38.002067576740544 40.0 36.0 41.0 34.0 41.0 26 38.0674973818725 40.0 37.0 41.0 34.0 41.0 27 38.06326303005568 40.0 37.0 41.0 34.0 41.0 28 37.91447686340531 40.0 36.0 41.0 34.0 41.0 29 37.88386000564013 40.0 36.0 41.0 34.0 41.0 30 37.74044613742937 40.0 36.0 41.0 33.0 41.0 31 37.741363013475386 40.0 36.0 41.0 33.0 41.0 32 37.65603969067125 40.0 36.0 41.0 33.0 41.0 33 37.59866620752008 40.0 36.0 41.0 33.0 41.0 34 37.49502945482012 40.0 36.0 41.0 33.0 41.0 35 37.403971051091396 40.0 36.0 41.0 33.0 41.0 36 37.322992615392465 40.0 35.0 41.0 33.0 41.0 37 37.32798087456087 40.0 35.0 41.0 33.0 41.0 38 37.17861652332507 40.0 35.0 41.0 32.0 41.0 39 37.13116145662836 40.0 35.0 41.0 32.0 41.0 40 37.02450057180755 40.0 35.0 41.0 32.0 41.0 41 36.85610431130138 39.0 35.0 41.0 31.0 41.0 42 36.87128165666889 39.0 35.0 41.0 31.0 41.0 43 36.82861361823095 39.0 35.0 41.0 31.0 41.0 44 36.75607837802218 39.0 35.0 41.0 31.0 41.0 45 36.73995156286978 39.0 35.0 41.0 31.0 41.0 46 36.60810847196301 39.0 35.0 41.0 31.0 41.0 47 36.52318194250181 39.0 35.0 41.0 31.0 41.0 48 36.412170502099464 39.0 35.0 41.0 31.0 41.0 49 36.36314810169814 39.0 35.0 41.0 31.0 41.0 50 36.22824686781255 39.0 35.0 41.0 30.0 41.0 51 35.0290070104881 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 13.0 10 18.0 11 17.0 12 11.0 13 20.0 14 12.0 15 38.0 16 44.0 17 72.0 18 141.0 19 326.0 20 667.0 21 1147.0 22 1675.0 23 2247.0 24 3029.0 25 3902.0 26 5082.0 27 5893.0 28 6888.0 29 7863.0 30 9508.0 31 12116.0 32 15781.0 33 21588.0 34 41388.0 35 56694.0 36 46170.0 37 69570.0 38 131258.0 39 262293.0 40 178.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.49739746080603 18.46732902812556 22.76615976317106 14.26911374789735 2 30.407832700589665 27.646434457533903 24.43807685603629 17.507655985840145 3 31.315072336843535 26.31774360631298 25.876311012290675 16.490873044552806 4 28.506484028359385 24.692024595518784 28.22773670494305 18.573754671178776 5 27.138397266660714 29.301912969048704 23.8831330235511 19.676556740739482 6 24.54917899205988 36.42492032247962 24.329100398635596 14.696800286824901 7 77.46695632580702 6.116852805258079 11.535632750755678 4.880558118179229 8 77.90371242685895 8.599503724897508 8.477489771943027 5.019294076300525 9 72.38445873845225 8.03152239685853 10.501986092393329 9.08203277229589 10 40.22846793838933 26.644389554698673 18.15315372766089 14.97398877925111 11 32.5937388844722 25.560860304652262 23.353555622632523 18.491845188243015 12 29.344001405782127 22.016362056920006 27.715023021099487 20.924613516198377 13 26.413115720527113 23.12965080768702 30.30140705753645 20.155826414249418 14 20.98044800802656 28.326084769229244 28.24956033880483 22.443906883939363 15 19.792335369733454 25.186032307480833 34.102120435282295 20.91951188750342 16 23.076508842114514 25.17937184779574 30.192714023952146 21.551405286137598 17 23.112503666795625 25.290048848094752 28.18593169202601 23.41151579308361 18 24.183278845104635 25.80347109147929 27.930425121553387 22.08282494186269 19 25.102847417371326 27.315112016177835 26.06152847629939 21.52051209015145 20 27.28676963453916 25.755997602234515 27.51024931376008 19.44698344946624 21 25.79312612218117 27.868071881948314 26.73891139746364 19.599890598406873 22 22.909147078538155 25.47739199072637 28.29334931843658 23.320111612298895 23 23.1983810831608 27.355499910012938 27.619650906885358 21.826468099940907 24 23.3562481488882 24.39258733350622 28.59505397098023 23.656110546625346 25 22.26846754159599 27.506281380330673 26.91860209705282 23.306648981020526 26 21.32126514723159 26.778165596033197 28.181113487147442 23.719455769587775 27 22.24281768621299 26.73083381869662 27.641474540747137 23.38487395434326 28 20.49621841772986 27.229234599812656 29.671497625616976 22.603049356840504 29 22.389914646917696 25.97437565276048 29.611411776542994 22.024297923778832 30 22.741785314961803 25.919391432381456 28.32636819304563 23.012455059611113 31 25.33454638726747 25.775978981289775 25.93526316609911 22.954211465343644 32 24.908702103146428 27.253325624205527 26.92171975903307 20.91625251361497 33 23.81808725769035 25.66629396434812 26.61037869673227 23.905240081229266 34 23.856916320535333 25.365014447529038 28.99085533056428 21.787213901371345 35 21.468078684119902 26.75520826690588 27.56991002710949 24.20680302186473 36 23.1833596208923 27.801183861281046 27.720833209335417 21.294623308491236 37 23.251381336825112 26.85582372172316 28.04847114107846 21.84432380037327 38 22.568755075057712 27.072076093626222 26.01292129178907 24.346247539526995 39 24.065232825579567 25.06699430459841 28.23269662172982 22.635076248092204 40 23.257191525061042 25.080173512060394 28.55707517958442 23.10555978329415 41 21.310920177933472 26.542923828432226 28.142001000486072 24.00415499314823 42 21.723868678408913 27.122525532943058 28.084749389575958 23.06885639907207 43 22.705223642647915 24.911678053218488 27.956358400752773 24.42673990338082 44 22.60404134019786 24.888295588366585 28.231704638372467 24.27595843306309 45 22.034926316893337 24.7428991705602 27.10863776594011 26.113536746606353 46 22.932246119573673 26.760593319417225 26.904430906233483 23.40272965477562 47 20.813086244450208 25.034825701438518 31.11384142720897 23.038246626902307 48 22.297660194683818 24.99528807905257 28.63714240771366 24.069909318549946 49 21.906677039978344 23.87661427577421 30.22913398435784 23.987574699889606 50 20.98129827947572 24.352482863487502 29.445041996323994 25.221176860712784 51 21.28725428926518 24.176334961603157 27.934251343074614 26.60215940605705 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 631.0 1 992.0 2 1353.0 3 2277.5 4 3202.0 5 2298.0 6 1394.0 7 1351.5 8 1309.0 9 1377.0 10 1445.0 11 1410.5 12 1376.0 13 1372.0 14 1368.0 15 1354.0 16 1340.0 17 1410.5 18 1481.0 19 1553.5 20 1626.0 21 1880.5 22 2135.0 23 2482.5 24 2830.0 25 3368.5 26 4862.0 27 5817.0 28 6855.0 29 7893.0 30 9541.0 31 11189.0 32 13196.5 33 15204.0 34 16720.0 35 18236.0 36 19402.5 37 20569.0 38 22425.0 39 24281.0 40 27431.5 41 30582.0 42 33940.0 43 37298.0 44 41352.5 45 45407.0 46 58502.0 47 71597.0 48 66656.5 49 61716.0 50 61969.5 51 62223.0 52 56315.0 53 50407.0 54 46454.5 55 42502.0 56 40404.0 57 38306.0 58 36737.0 59 35168.0 60 33639.5 61 32111.0 62 28267.5 63 24424.0 64 20819.5 65 17215.0 66 13975.5 67 10736.0 68 8576.0 69 6416.0 70 5360.0 71 4304.0 72 3605.0 73 2906.0 74 2333.0 75 1305.0 76 850.0 77 766.5 78 683.0 79 446.0 80 209.0 81 160.0 82 111.0 83 102.5 84 94.0 85 57.0 86 20.0 87 14.5 88 9.0 89 9.5 90 10.0 91 7.5 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 705657.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.737957532552198 #Duplication Level Percentage of deduplicated Percentage of total 1 74.03319473218103 20.535296114804044 2 9.118587415346102 5.058619809674702 3 3.1638565999107278 2.6327676002222624 4 1.636591269276499 1.8158279650134894 5 1.0811648108620147 1.4994651804690196 6 0.8060920486059618 1.3415608206936105 7 0.6540097656527252 1.2698626573884793 8 0.5610337353857529 1.2449543941167311 9 0.48831831459117925 1.2190457405247834 >10 8.068635847880389 51.92919661268489 >50 0.33206010940432573 5.649827342392256 >100 0.048756893961948745 2.119877515445735 >500 0.004619074164816197 0.9495388508510545 >1k 0.002052921851029421 1.282233347768433 >5k 0.0010264609255147105 1.4519260479505105 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGC 5169 0.7325088534514644 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCG 5030 0.7128108982125877 No Hit GAATCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTC 4249 0.6021338979135755 No Hit GCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCTGC 1867 0.26457613259699825 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1506 0.21341813373919621 No Hit CCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCTGC 1385 0.19627099284779997 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCT 900 0.12754071737402164 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCGTCGATT 890 0.12612359829208808 No Hit CTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCTGCT 799 0.11322781464649255 No Hit GAACTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCT 743 0.10529194778766454 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCGTCGATTCGTA 735 0.10415825252211768 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 734 0.10401654061392433 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTC 706 0.10004860718451034 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.668476327734296E-4 0.0 0.0 0.12031341005616043 0.0 2 5.668476327734296E-4 0.0 0.0 0.7242895627762497 0.0 3 5.668476327734296E-4 0.0 0.0 0.9676089091442442 0.0 4 5.668476327734296E-4 0.0 0.0 1.3332256322831064 0.0 5 5.668476327734296E-4 0.0 0.0 2.6177023681476976 0.0 6 5.668476327734296E-4 0.0 0.0 3.2571064979161264 0.0 7 5.668476327734296E-4 0.0 0.0 3.8538553433183544 0.0 8 5.668476327734296E-4 0.0 0.0 4.648717436374896 0.0 9 5.668476327734296E-4 0.0 0.0 4.958641379593769 0.0 10 5.668476327734296E-4 0.0 0.0 6.329278955639921 0.0 11 5.668476327734296E-4 0.0 0.0 7.170622554583884 0.0 12 5.668476327734296E-4 0.0 0.0 8.61013211801201 0.0 13 5.668476327734296E-4 0.0 0.0 8.972206043446036 0.0 14 5.668476327734296E-4 0.0 0.0 9.14537799525832 0.0 15 5.668476327734296E-4 0.0 0.0 9.48095179386019 0.0 16 5.668476327734296E-4 0.0 0.0 9.981761677415514 0.0 17 5.668476327734296E-4 0.0 0.0 10.551868684077391 0.0 18 5.668476327734296E-4 0.0 0.0 11.234636657752988 0.0 19 5.668476327734296E-4 0.0 0.0 11.734171134134572 0.0 20 5.668476327734296E-4 0.0 0.0 12.13549925813816 0.0 21 5.668476327734296E-4 0.0 0.0 12.578774106966982 0.0 22 5.668476327734296E-4 0.0 0.0 13.08766156928933 0.0 23 5.668476327734296E-4 0.0 0.0 13.535896334904919 0.0 24 5.668476327734296E-4 0.0 0.0 13.91752650366963 0.0 25 5.668476327734296E-4 0.0 0.0 14.262595000120456 0.0 26 5.668476327734296E-4 0.0 0.0 14.593492305751944 0.0 27 5.668476327734296E-4 0.0 0.0 14.9528737049303 0.0 28 5.668476327734296E-4 0.0 0.0 15.305594644423566 0.0 29 5.668476327734296E-4 0.0 0.0 15.664267484060954 0.0 30 5.668476327734296E-4 0.0 0.0 16.096630515958886 0.0 31 7.08559540966787E-4 0.0 0.0 16.479536091897337 0.0 32 7.08559540966787E-4 0.0 0.0 16.848837324649228 0.0 33 7.08559540966787E-4 0.0 0.0 17.2313177648631 0.0 34 7.08559540966787E-4 0.0 0.0 17.621025512394834 0.0 35 7.08559540966787E-4 0.0 0.0 17.998971171546515 0.0 36 8.502714491601444E-4 0.0 0.0 18.357644011183904 0.0 37 8.502714491601444E-4 0.0 0.0 18.745084368184543 0.0 38 8.502714491601444E-4 0.0 0.0 19.151655832791285 0.0 39 8.502714491601444E-4 0.0 0.0 19.553409092519452 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTAG 25 3.8892693E-5 45.0 1 CCAATCG 20 7.031433E-4 45.0 1 ACGATAG 25 3.8892693E-5 45.0 1 ACGATAA 20 7.031433E-4 45.0 40 TCCCGAT 20 7.031433E-4 45.0 12 CGATAGT 20 7.031433E-4 45.0 10 GCGTAAG 45 3.8380676E-10 45.0 1 TGTCGAA 30 2.1643064E-6 44.999996 29 CGAAAGG 60 3.6379788E-12 41.249996 2 TTTACGG 95 0.0 40.263157 2 CCGACGG 45 1.9264917E-8 40.0 2 GGACCGT 45 1.9264917E-8 40.0 8 ATAACGG 85 0.0 39.705883 2 CGCGCAT 40 3.455698E-7 39.375 36 TACGCGC 40 3.455698E-7 39.375 34 ATTGCGG 150 0.0 39.0 2 TCATGCG 35 6.24486E-6 38.57143 1 ATTGCTC 35 6.24486E-6 38.57143 21 CGTATGG 65 9.094947E-12 38.07692 2 TAGGGAT 510 0.0 37.5 5 >>END_MODULE