##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935621.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 310155 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06828843642695 33.0 31.0 34.0 30.0 34.0 2 32.07023907401138 33.0 31.0 34.0 30.0 34.0 3 32.09248279086263 33.0 31.0 34.0 30.0 34.0 4 35.76700037078235 37.0 35.0 37.0 35.0 37.0 5 35.84120842804404 37.0 35.0 37.0 35.0 37.0 6 35.78362109267947 37.0 35.0 37.0 35.0 37.0 7 36.06549305992165 37.0 35.0 37.0 35.0 37.0 8 35.871361093646726 37.0 35.0 37.0 35.0 37.0 9 37.67956021989006 39.0 38.0 39.0 35.0 39.0 10 37.34619464461318 39.0 37.0 39.0 34.0 39.0 11 37.313156325063275 39.0 37.0 39.0 34.0 39.0 12 37.10527316986668 39.0 37.0 39.0 34.0 39.0 13 36.926507713884995 39.0 35.0 39.0 33.0 39.0 14 37.97407102900163 40.0 37.0 41.0 33.0 41.0 15 38.12669471715755 40.0 37.0 41.0 33.0 41.0 16 37.985333139881675 40.0 36.0 41.0 33.0 41.0 17 38.01678193161484 40.0 36.0 41.0 34.0 41.0 18 37.97796907997614 40.0 36.0 41.0 34.0 41.0 19 37.87129660975964 40.0 36.0 41.0 34.0 41.0 20 37.96061001757186 40.0 36.0 41.0 34.0 41.0 21 37.90666924602215 40.0 36.0 41.0 34.0 41.0 22 38.019164611242765 40.0 36.0 41.0 34.0 41.0 23 38.03585948961003 40.0 36.0 41.0 34.0 41.0 24 37.971198271831824 40.0 36.0 41.0 34.0 41.0 25 37.754335735358126 40.0 35.0 41.0 33.0 41.0 26 37.79877158195096 40.0 35.0 41.0 34.0 41.0 27 37.803127468523805 40.0 35.0 41.0 34.0 41.0 28 37.729351453305604 40.0 36.0 41.0 33.0 41.0 29 37.7030710451226 40.0 36.0 41.0 33.0 41.0 30 37.56140316938305 40.0 36.0 41.0 33.0 41.0 31 37.5214263835824 40.0 35.0 41.0 33.0 41.0 32 37.466092760071575 40.0 35.0 41.0 33.0 41.0 33 37.374135512888714 40.0 35.0 41.0 33.0 41.0 34 37.327381470555046 40.0 35.0 41.0 33.0 41.0 35 37.23245151617739 40.0 35.0 41.0 33.0 41.0 36 37.048611178281824 39.0 35.0 41.0 32.0 41.0 37 37.026986506746624 39.0 35.0 41.0 32.0 41.0 38 36.93372346085022 39.0 35.0 41.0 32.0 41.0 39 36.89501700762522 39.0 35.0 41.0 32.0 41.0 40 36.82189227966662 39.0 35.0 41.0 31.0 41.0 41 36.65063919653077 39.0 35.0 41.0 31.0 41.0 42 36.67833825022972 39.0 35.0 41.0 31.0 41.0 43 36.56467250245845 39.0 35.0 41.0 31.0 41.0 44 36.53750544082797 39.0 35.0 41.0 31.0 41.0 45 36.607651013203075 39.0 35.0 41.0 31.0 41.0 46 36.49898599087553 39.0 35.0 41.0 31.0 41.0 47 36.39522174396673 38.0 35.0 40.0 31.0 41.0 48 36.30577291999162 38.0 35.0 40.0 31.0 41.0 49 36.28957134336058 38.0 35.0 40.0 31.0 41.0 50 36.16276377940062 38.0 35.0 40.0 31.0 41.0 51 35.06719543454079 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 8.0 10 6.0 11 8.0 12 4.0 13 6.0 14 7.0 15 17.0 16 12.0 17 38.0 18 64.0 19 133.0 20 254.0 21 496.0 22 721.0 23 931.0 24 1264.0 25 1572.0 26 2082.0 27 2578.0 28 2871.0 29 3441.0 30 4092.0 31 5554.0 32 7373.0 33 10732.0 34 21725.0 35 30824.0 36 21681.0 37 32782.0 38 59324.0 39 99480.0 40 72.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.45296706485467 19.301317083393787 23.023327046154343 15.2223888055972 2 27.747739033708953 27.63940610339991 26.972965130338057 17.63988973255308 3 30.743982847286034 26.894939626960713 27.316986667956343 15.044090857796908 4 28.642452967064852 24.487111283068145 28.162370427689382 18.70806532217762 5 26.92363495671519 28.877496735503215 24.795344263352195 19.4035240444294 6 23.305766471602908 36.553336235108254 24.53547419838468 15.605423094904161 7 78.02550337734358 5.889635827247666 11.260176363431187 4.82468443197756 8 78.39177185600748 7.229611000951137 8.798826393254986 5.579790749786397 9 72.41443794231917 7.389531040931148 10.976769679676291 9.2192613370734 10 41.352227112250326 26.791442988183327 17.726942980122843 14.129386919443505 11 33.24112137479647 24.13631893730554 23.978655833373637 18.643903854524353 12 29.937289419806223 21.552772001096226 28.92263545646532 19.587303122632232 13 25.048443520175397 25.81644661540198 30.343215489029678 18.79189437539295 14 18.989215069884413 30.570198771581953 28.762715416485307 21.67787074204833 15 17.581854234173235 24.89626154664603 37.66439360964679 19.857490609533944 16 19.94938014863536 23.61496671019329 33.31076397285228 23.124889168319065 17 19.881349647756767 24.25819348390321 29.32340281472167 26.537054053618352 18 22.095403910947752 24.882397510921958 30.279376440811852 22.742822137318438 19 23.691057696957973 26.71051570988699 27.335686995212072 22.262739597942964 20 25.46887846399381 25.711660298882816 28.970998371781853 19.848462865341524 21 23.578855733423612 28.707259273589013 27.159645983459885 20.554239009527496 22 20.62323676871242 24.544179523141654 28.555722138930534 26.27686156921539 23 20.871499734003965 27.460463316728735 27.41081072367042 24.257226225596877 24 22.005448888458996 24.258515903338655 29.610356112266444 24.125679095935904 25 20.48427399203624 28.064999758185422 27.050023375409072 24.40070287436927 26 18.968902645451468 29.028711450726252 27.844464864342022 24.15792103948026 27 21.59017265560768 28.77657945220938 27.824152439909078 21.809095452273862 28 18.153503893214683 27.27346004417146 32.12651738646806 22.4465186761458 29 21.30644355241734 27.00746400993052 28.989053860166692 22.69703857748545 30 22.865341522786995 28.478663893859522 28.399026293304964 20.256968290048523 31 24.701197788202673 27.462397833341395 25.403427318598766 22.43297705985717 32 27.249278586513192 28.25716174170979 24.199190727217037 20.294368944559977 33 25.107446276861566 26.563814866760165 25.419225870935502 22.909512985442763 34 23.13520659025326 26.916541729135435 27.70260031274685 22.245651367864454 35 24.733117312311588 26.633779884251425 26.5973464880463 22.035756315390692 36 25.362157630861986 27.319243604004452 27.745482097660844 19.573116667472714 37 24.622527445954443 27.69518466573165 28.86685689413358 18.81543099418033 38 24.959133336557528 26.43355741484097 26.59637922973997 22.010930018861536 39 27.47916364398446 23.989295674743275 27.672292885815157 20.85924779545711 40 26.270735599941965 23.50437684383615 28.586351985297675 21.638535570924216 41 22.540987570730763 25.48532185520143 27.508503812609824 24.46518676145798 42 23.647208653737646 24.73150521513437 28.701133304315583 22.9201528268124 43 24.028630845867387 23.80938562976576 29.364350083023005 22.797633441343844 44 21.997388402572906 25.57753381373829 28.684045074237076 23.741032709451726 45 23.06556399219745 25.612032693330754 26.57638922474247 24.74601408972933 46 26.071802808273283 26.126291692863248 26.280085763569826 21.521819735293644 47 22.81472167142235 24.0731247279586 30.957424513549675 22.15472908706937 48 23.136496267995035 24.186293949799296 28.66985861907756 24.007351163128114 49 22.391384952684948 22.750882623204525 31.474907707436607 23.382824716673923 50 22.699940352404443 22.329802840515224 30.454772613693155 24.515484193387177 51 21.554384098273445 23.222582257258466 27.010365784849512 28.212667859618577 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 247.0 1 444.0 2 641.0 3 979.5 4 1318.0 5 920.0 6 522.0 7 557.5 8 593.0 9 596.5 10 600.0 11 601.5 12 603.0 13 703.5 14 804.0 15 694.0 16 584.0 17 554.5 18 525.0 19 601.0 20 677.0 21 801.0 22 925.0 23 943.5 24 962.0 25 1255.0 26 2189.5 27 2831.0 28 3335.0 29 3839.0 30 4368.5 31 4898.0 32 5262.5 33 5627.0 34 6562.5 35 7498.0 36 7749.5 37 8001.0 38 9132.5 39 10264.0 40 12463.5 41 14663.0 42 16016.0 43 17369.0 44 20599.5 45 23830.0 46 28968.0 47 34106.0 48 33776.0 49 33446.0 50 31761.5 51 30077.0 52 25871.0 53 21665.0 54 18834.5 55 16004.0 56 14735.0 57 13466.0 58 12660.5 59 11855.0 60 11624.0 61 11393.0 62 10332.5 63 9272.0 64 7713.5 65 6155.0 66 5320.0 67 4485.0 68 3623.0 69 2761.0 70 2495.5 71 2230.0 72 1917.5 73 1605.0 74 1329.0 75 817.0 76 581.0 77 425.5 78 270.0 79 209.5 80 149.0 81 120.5 82 92.0 83 96.5 84 101.0 85 57.0 86 13.0 87 7.0 88 1.0 89 2.5 90 4.0 91 2.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 310155.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.290806209798326 #Duplication Level Percentage of deduplicated Percentage of total 1 73.41576506955178 22.972384775354257 2 10.787223080886141 6.750818139317438 3 3.9021123132405973 3.663007206074382 4 1.903142709943328 2.3820347890570845 5 1.1509531169500258 1.8007125469523304 6 0.8160741885625966 1.5321371572278377 7 0.6007212776919114 1.3157937160452031 8 0.4801648634724369 1.2019796553336235 9 0.4348274085522926 1.2245490158146732 >10 6.098918083462133 44.21627895729554 >50 0.3554868624420402 6.787896374393449 >100 0.04739824832560536 2.8669536199642116 >500 0.0020607934054611026 0.4562235011526495 >1k 0.005151983513652756 2.829230546017314 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGC 2278 0.7344714739404491 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCG 1986 0.6403249987909272 No Hit GAATCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTC 1874 0.6042140220212475 No Hit GCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCTGC 1421 0.45815801776531095 No Hit CCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCTGC 1216 0.39206203349937935 No Hit CTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCTGCT 713 0.22988505747126436 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 702 0.2263384436813851 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 465 0.14992503748125938 No Hit GAATGACTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCT 464 0.14960261804581582 No Hit TCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCTGC 459 0.14799052086859796 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAATGGGGTT 390 0.12574357982299172 No Hit ACTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCTGC 355 0.11445889958246684 No Hit GAACTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCT 332 0.10704325256726477 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTC 311 0.10027244442294982 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAATGGGGTTCGTA 311 0.10027244442294982 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.44838870887137E-4 0.0 0.0 0.2408473182763457 0.0 2 6.44838870887137E-4 0.0 0.0 1.4102626106301688 0.0 3 6.44838870887137E-4 0.0 0.0 1.863584336863826 0.0 4 6.44838870887137E-4 0.0 0.0 2.493591913720559 0.0 5 6.44838870887137E-4 0.0 0.0 4.50581161032387 0.0 6 6.44838870887137E-4 0.0 0.0 5.477583788750786 0.0 7 6.44838870887137E-4 0.0 0.0 6.569940836033596 0.0 8 6.44838870887137E-4 0.0 0.0 8.127549128661476 0.0 9 6.44838870887137E-4 0.0 0.0 8.75497735003466 0.0 10 6.44838870887137E-4 0.0 0.0 10.626944592220019 0.0 11 6.44838870887137E-4 0.0 0.0 12.074607857361642 0.0 12 6.44838870887137E-4 0.0 0.0 14.136480147023262 0.0 13 6.44838870887137E-4 0.0 0.0 14.708774644935596 0.0 14 6.44838870887137E-4 0.0 0.0 14.941561477325854 0.0 15 6.44838870887137E-4 0.0 0.0 15.401331592268383 0.0 16 6.44838870887137E-4 0.0 0.0 16.138704841127822 0.0 17 6.44838870887137E-4 0.0 0.0 17.053086360045782 0.0 18 6.44838870887137E-4 0.0 0.0 18.153503893214683 0.0 19 6.44838870887137E-4 0.0 0.0 18.852186809820896 0.0 20 9.672583063307056E-4 0.0 0.0 19.45349905692315 0.0 21 9.672583063307056E-4 0.0 0.0 20.119940029985006 0.0 22 9.672583063307056E-4 0.0 0.0 20.854089084490013 0.0 23 9.672583063307056E-4 0.0 0.0 21.537295868194935 0.0 24 9.672583063307056E-4 0.0 0.0 22.09895052473763 0.0 25 9.672583063307056E-4 0.0 0.0 22.590962583224517 0.0 26 9.672583063307056E-4 0.0 0.0 23.027196079379664 0.0 27 9.672583063307056E-4 0.0 0.0 23.484709258274087 0.0 28 9.672583063307056E-4 0.0 0.0 23.94480179265206 0.0 29 9.672583063307056E-4 0.0 0.0 24.41166513517435 0.0 30 9.672583063307056E-4 0.0 0.0 24.96945075849172 0.0 31 0.001289677741774274 0.0 0.0 25.425996679079816 0.0 32 0.001289677741774274 0.0 0.0 25.924134706840128 0.0 33 0.001289677741774274 0.0 0.0 26.399058535248503 0.0 34 0.001289677741774274 0.0 0.0 26.876239299704988 0.0 35 0.001289677741774274 0.0 0.0 27.363092647224775 0.0 36 0.001289677741774274 0.0 0.0 27.834792281278716 0.0 37 0.001289677741774274 0.0 0.0 28.294884815656687 0.0 38 0.001289677741774274 0.0 0.0 28.74885138076123 0.0 39 0.001289677741774274 0.0 0.0 29.240541019812675 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCCG 20 7.025314E-4 45.0 30 TCCGGAA 20 7.025314E-4 45.0 33 CTTCGTT 20 7.025314E-4 45.0 7 CGGAATC 20 7.025314E-4 45.0 20 CGGGTAT 25 3.8841987E-5 45.0 6 TTGGCAA 20 7.025314E-4 45.0 28 ACACGCG 25 3.8841987E-5 45.0 36 CACGGGC 25 3.8841987E-5 45.0 4 GCGCGTT 25 3.8841987E-5 45.0 12 CGGCCTA 25 3.8841987E-5 45.0 31 TCCGAGC 20 7.025314E-4 45.0 13 CGGCCAA 20 7.025314E-4 45.0 31 GACGTAT 20 7.025314E-4 45.0 20 GGTCCGA 20 7.025314E-4 45.0 11 CCGGAAT 20 7.025314E-4 45.0 19 GGATACG 25 3.8841987E-5 45.0 1 TCGGCCT 20 7.025314E-4 45.0 30 ATCCGGA 20 7.025314E-4 45.0 32 CCGAGCG 20 7.025314E-4 45.0 14 AGCGATT 45 3.8198777E-10 45.0 22 >>END_MODULE