##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935617.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 420563 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.987395467504275 33.0 31.0 34.0 30.0 34.0 2 32.01161062670753 33.0 31.0 34.0 30.0 34.0 3 32.043132657889544 33.0 31.0 34.0 30.0 34.0 4 35.72962909243086 37.0 35.0 37.0 35.0 37.0 5 35.74933363134655 37.0 35.0 37.0 35.0 37.0 6 35.67312863946662 37.0 35.0 37.0 35.0 37.0 7 35.895523381752554 37.0 35.0 37.0 35.0 37.0 8 35.61150172506854 37.0 35.0 37.0 33.0 37.0 9 37.36216690483946 39.0 37.0 39.0 34.0 39.0 10 37.12818293573139 39.0 37.0 39.0 34.0 39.0 11 37.138171926679235 39.0 37.0 39.0 34.0 39.0 12 37.02872102396074 39.0 37.0 39.0 33.0 39.0 13 36.86307402220357 39.0 35.0 39.0 33.0 39.0 14 38.00911397341183 40.0 37.0 41.0 33.0 41.0 15 37.99595304389592 40.0 37.0 41.0 33.0 41.0 16 37.96665422302961 40.0 36.0 41.0 33.0 41.0 17 37.824088186549936 40.0 36.0 41.0 33.0 41.0 18 37.810270993882014 40.0 36.0 41.0 33.0 41.0 19 37.66842304244548 40.0 36.0 41.0 33.0 41.0 20 37.52891956734187 40.0 35.0 41.0 32.0 41.0 21 37.709693910305944 40.0 36.0 41.0 33.0 41.0 22 37.73811295810616 40.0 36.0 41.0 33.0 41.0 23 37.68726920818046 40.0 36.0 41.0 33.0 41.0 24 37.64248875911576 40.0 35.0 41.0 33.0 41.0 25 37.54559483359211 39.0 35.0 41.0 33.0 41.0 26 37.43470300525724 40.0 35.0 41.0 33.0 41.0 27 37.37640733968514 40.0 35.0 41.0 33.0 41.0 28 37.25574765255146 40.0 35.0 41.0 32.0 41.0 29 37.17723622857931 40.0 35.0 41.0 32.0 41.0 30 37.10321164724429 39.0 35.0 41.0 31.0 41.0 31 37.156813604620474 39.0 35.0 41.0 32.0 41.0 32 36.92213770588473 39.0 35.0 41.0 31.0 41.0 33 36.751623419083465 39.0 35.0 41.0 31.0 41.0 34 36.546163119437516 39.0 35.0 41.0 30.0 41.0 35 36.49122723587192 39.0 35.0 41.0 30.0 41.0 36 36.41705761086924 39.0 35.0 41.0 30.0 41.0 37 36.31629268385474 39.0 35.0 41.0 30.0 41.0 38 36.25852012659221 39.0 35.0 41.0 30.0 41.0 39 36.10321878053942 39.0 35.0 41.0 30.0 41.0 40 35.95003364537536 39.0 35.0 41.0 29.0 41.0 41 35.895875290979 39.0 35.0 41.0 28.0 41.0 42 35.90810651436289 39.0 35.0 41.0 29.0 41.0 43 35.83093852764033 39.0 35.0 41.0 29.0 41.0 44 35.82418329715168 39.0 35.0 41.0 28.0 41.0 45 35.87497235848137 39.0 35.0 40.0 29.0 41.0 46 35.74826839260705 38.0 35.0 40.0 28.0 41.0 47 35.52373841731203 38.0 35.0 40.0 28.0 41.0 48 35.558035300299835 38.0 35.0 40.0 28.0 41.0 49 35.52561209616633 38.0 35.0 40.0 28.0 41.0 50 35.34933172913452 38.0 35.0 40.0 27.0 41.0 51 34.22068750698468 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 8.0 11 19.0 12 6.0 13 9.0 14 14.0 15 22.0 16 40.0 17 71.0 18 174.0 19 417.0 20 957.0 21 1771.0 22 2611.0 23 3030.0 24 3455.0 25 3712.0 26 4156.0 27 4394.0 28 4791.0 29 5283.0 30 6405.0 31 8404.0 32 11461.0 33 15465.0 34 26684.0 35 36298.0 36 30165.0 37 44020.0 38 76692.0 39 129948.0 40 72.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.06556924884025 16.618437665700505 19.46795129386085 15.848041791598405 2 26.672579375741567 34.44763329156393 23.02770334052211 15.852083992172398 3 28.0554875250557 33.11346932564206 23.66042661860411 15.170616530698137 4 25.11633215475446 22.818460016691912 34.862315515154684 17.202892313398944 5 31.5379622078024 26.319719043282458 23.202706847725548 18.939611901189597 6 22.7033761885853 39.358431435956085 23.76718826905838 14.17100410640023 7 71.26732499054839 5.710202752025261 18.271222147454722 4.751250109971633 8 70.74445445747723 13.851194708046119 10.09171039772876 5.312640436747883 9 65.31221243904005 7.550117342704898 10.853308541169813 16.28436167708524 10 42.33991102403208 23.851598928103517 18.45478560881485 15.35370443904956 11 35.564707309011965 22.639889861923184 23.14207383911566 18.653328989949188 12 27.865741874582405 19.49791113340926 28.0364654047075 24.599881587300832 13 26.724176877186057 22.05448410820733 31.94146893568859 19.27987007891802 14 20.61926512793565 30.291062218977892 26.653557255393366 22.436115397693094 15 18.51446751140733 22.538121518060315 36.998499630257534 21.948911340274822 16 20.255704852780674 23.2835508592054 29.10955076885033 27.351193519163598 17 20.50822350040303 25.58736740987676 30.119387582835387 23.785021506884817 18 21.753459053697068 24.119335272004435 28.485149668420668 25.642056005877834 19 22.989659099825708 26.145428865592073 25.933807776718353 24.931104257863865 20 27.125543616533076 24.37589612020078 29.913235353561774 18.585324909704372 21 23.549860544080197 30.533594253417444 26.01108514063291 19.905460061869444 22 20.883434824271273 23.62048016587289 30.47605233936414 25.020032670491698 23 23.341092773258705 27.78537341611126 27.087023822827973 21.786509987802066 24 23.14207383911566 24.85477799996671 26.585315398644198 25.417832762273427 25 20.25998482985902 32.10981470077016 25.011234939830658 22.618965529540162 26 19.31292101302302 25.84440381108181 29.752498436619483 25.090176739275684 27 24.723525369564133 27.27819613232738 24.952979696264293 23.045298801844194 28 18.697555419758753 28.81304346792276 29.690914321992185 22.7984867903263 29 23.47115652113952 26.17253538708826 27.492670539253332 22.863637552518888 30 20.353193219565203 31.094984580193692 27.991287868880526 20.56053433136058 31 24.260574515589816 24.855015776471063 23.477100933748332 27.407308774190785 32 29.503308660058064 27.61013213240347 23.552476085628076 19.334083121910393 33 24.91755099711577 24.615099283579394 25.515321129057956 24.952028590246883 34 23.592898091368 26.20748853322808 28.35461036753114 21.84500300787278 35 25.289195673418728 26.342545587700293 25.349353129019907 23.01890560986107 36 23.50159191369664 30.296055525569297 23.96121389661002 22.241138664124044 37 24.984603971343176 27.412064304277838 27.722124865953496 19.88120685842549 38 22.975630286068913 24.918026550124477 24.987219512891055 27.11912365091556 39 26.82047636144882 23.918176349322216 27.74138476280605 21.519962526422916 40 24.2306146760414 23.63664896816886 29.69210320451395 22.44063315127579 41 22.286078423446664 25.210016097469346 27.78537341611126 24.718532062972727 42 25.2437803610874 23.801428085685142 28.05192087749041 22.90287067573705 43 26.552740017547904 24.311696464025605 24.365909507017975 24.76965401140852 44 22.6938651284112 24.037540154507173 28.351519272974564 24.917075444107066 45 21.80481877863721 22.68316518571534 27.225409748361123 28.286606287286325 46 27.204009862969404 26.130924498826573 25.037628131813783 21.627437506390244 47 20.146327660778528 24.555892933995622 33.72312828280186 21.574651122423987 48 23.236708887847957 24.661227925423777 26.75413671673447 25.34792646999379 49 22.418282159866653 22.69648066995908 31.595504121855704 23.289733048318563 50 22.838195466553167 22.869581965127697 29.115019628450433 25.1772029398687 51 21.149031179633017 23.183209174368642 26.69302815511588 28.974731490882462 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 350.0 1 629.5 2 909.0 3 1663.5 4 2418.0 5 1725.5 6 1033.0 7 1005.5 8 978.0 9 983.5 10 989.0 11 992.0 12 995.0 13 973.5 14 952.0 15 1014.0 16 1076.0 17 1030.5 18 985.0 19 970.5 20 956.0 21 1061.5 22 1167.0 23 1377.0 24 1587.0 25 1824.5 26 2656.5 27 3251.0 28 3993.0 29 4735.0 30 5361.5 31 5988.0 32 6656.0 33 7324.0 34 8272.0 35 9220.0 36 9623.5 37 10027.0 38 11277.0 39 12527.0 40 14281.0 41 16035.0 42 18099.5 43 20164.0 44 22290.5 45 24417.0 46 43376.5 47 62336.0 48 48821.0 49 35306.0 50 34944.0 51 34582.0 52 30304.0 53 26026.0 54 24377.5 55 22729.0 56 22809.5 57 22890.0 58 21421.0 59 19952.0 60 19444.5 61 18937.0 62 17022.5 63 15108.0 64 12860.0 65 10612.0 66 8719.0 67 6826.0 68 5993.5 69 5161.0 70 4312.0 71 3463.0 72 3142.0 73 2821.0 74 2148.5 75 1260.5 76 1045.0 77 813.5 78 582.0 79 425.0 80 268.0 81 220.5 82 173.0 83 132.5 84 92.0 85 55.0 86 18.0 87 12.5 88 7.0 89 4.5 90 2.0 91 3.0 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 420563.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.5792075219455 #Duplication Level Percentage of deduplicated Percentage of total 1 74.32391474444205 21.984424980692367 2 8.324417472570879 4.924593438409662 3 3.0644581110482263 2.719327272270138 4 1.6706635103985215 1.9766761069367926 5 1.205588101115122 1.7830170314436202 6 1.0643545601877167 1.8889658647632903 7 0.9150047098668466 1.8945579937696289 8 0.7303553082110767 1.728266498106392 9 0.670693175931803 1.785471537099555 >10 7.8781939677164186 46.10803616323357 >50 0.10963207427269611 2.0603891881092884 >100 0.03224472772726356 1.7260915788361464 >500 0.002418354579544767 0.5364975897750144 >1k 0.005642827352271123 2.650298093488571 >5k 0.002418354579544767 6.233386663065967 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGC 9326 2.2175036795914047 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCG 8622 2.0501090205272456 No Hit GAATCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTC 8194 1.948340676664376 No Hit GCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC 2476 0.5887346247767873 No Hit GAACTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCT 1664 0.3956601032425582 No Hit GAATGACTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCT 1630 0.3875757020945732 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAACGTTGGT 1605 0.38163128948576075 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAACGTTGGTCGTA 1369 0.325516034458571 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTC 1246 0.29626952442321364 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1125 0.2674985673965613 No Hit CCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC 977 0.23230764475239146 No Hit GAATGCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTT 696 0.16549244702933924 No Hit CTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGCT 577 0.13719704301139188 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATG 443 0.10533499142815703 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.377765043524989E-4 0.0 0.0 0.14337923212455683 0.0 2 2.377765043524989E-4 0.0 0.0 1.10661185125653 0.0 3 2.377765043524989E-4 0.0 0.0 1.3610327109137037 0.0 4 2.377765043524989E-4 0.0 0.0 2.038457971813973 0.0 5 2.377765043524989E-4 0.0 0.0 4.697512619987968 0.0 6 2.377765043524989E-4 0.0 0.0 5.384924494071043 0.0 7 2.377765043524989E-4 0.0 0.0 6.262557571636116 0.0 8 2.377765043524989E-4 0.0 0.0 7.270016620577654 0.0 9 2.377765043524989E-4 0.0 0.0 7.603141503175506 0.0 10 2.377765043524989E-4 0.0 0.0 10.295484861958851 0.0 11 2.377765043524989E-4 0.0 0.0 11.087756174461378 0.0 12 2.377765043524989E-4 0.0 0.0 14.067095773998188 0.0 13 2.377765043524989E-4 0.0 0.0 14.506506754041606 0.0 14 2.377765043524989E-4 0.0 0.0 14.731205550654717 0.0 15 2.377765043524989E-4 0.0 0.0 15.290218112387443 0.0 16 2.377765043524989E-4 0.0 0.0 15.786219900466754 0.0 17 2.377765043524989E-4 0.0 0.0 16.27485061691114 0.0 18 2.377765043524989E-4 0.0 0.0 16.872620748853322 0.0 19 2.377765043524989E-4 0.0 0.0 17.62684782065945 0.0 20 2.377765043524989E-4 0.0 0.0 18.032018984076107 0.0 21 2.377765043524989E-4 0.0 0.0 18.43195906439701 0.0 22 2.377765043524989E-4 0.0 0.0 18.90085433098014 0.0 23 2.377765043524989E-4 0.0 0.0 19.28082118493543 0.0 24 2.377765043524989E-4 0.0 0.0 19.605861666385298 0.0 25 4.755530087049978E-4 0.0 0.0 19.897375660721462 0.0 26 4.755530087049978E-4 0.0 0.0 20.178903041874822 0.0 27 4.755530087049978E-4 0.0 0.0 20.540798881499324 0.0 28 4.755530087049978E-4 0.0 0.0 20.81162631995682 0.0 29 4.755530087049978E-4 0.0 0.0 21.121211328623772 0.0 30 4.755530087049978E-4 0.0 0.0 21.527809151066545 0.0 31 4.755530087049978E-4 0.0 0.0 21.83763193623785 0.0 32 4.755530087049978E-4 0.0 0.0 22.14959470994833 0.0 33 4.755530087049978E-4 0.0 0.0 22.45038198795424 0.0 34 4.755530087049978E-4 0.0 0.0 22.771618045334467 0.0 35 4.755530087049978E-4 0.0 0.0 23.080251947984014 0.0 36 4.755530087049978E-4 0.0 0.0 23.372003718824526 0.0 37 4.755530087049978E-4 0.0 0.0 23.668511019752096 0.0 38 4.755530087049978E-4 0.0 0.0 23.992124842175844 0.0 39 4.755530087049978E-4 0.0 0.0 24.317640876634417 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGCTC 20 7.0281787E-4 45.000004 29 AAGACGG 40 6.7975634E-9 45.000004 2 TGTAGCG 20 7.0281787E-4 45.000004 1 TAGGCGA 20 7.0281787E-4 45.000004 14 CAGTAAG 20 7.0281787E-4 45.000004 1 GTATGCG 25 3.8865728E-5 45.0 1 GGTCGAA 135 0.0 43.333336 42 CGATGAA 845 0.0 42.60355 19 ATGAATG 875 0.0 42.171425 21 CGGTCGA 140 0.0 41.785713 41 CCGATGA 835 0.0 41.766468 18 GATGAAT 880 0.0 41.676136 20 GTCGAAT 135 0.0 41.666668 43 CGGCGAA 245 0.0 41.32653 31 TAAGGGA 230 0.0 41.086956 4 TATGGGT 55 6.002665E-11 40.909092 4 TACGGCT 985 0.0 40.431473 7 ACGGCTG 985 0.0 40.431473 8 GCCCGCT 45 1.9232175E-8 40.0 23 CCCGCTA 45 1.9232175E-8 40.0 24 >>END_MODULE