##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935616.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1131979 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00555487336779 33.0 31.0 34.0 30.0 34.0 2 32.026738128534184 33.0 31.0 34.0 30.0 34.0 3 32.0546193878155 33.0 31.0 34.0 30.0 34.0 4 35.713492034746224 37.0 35.0 37.0 35.0 37.0 5 35.73503130358425 37.0 35.0 37.0 35.0 37.0 6 35.644267252307685 37.0 35.0 37.0 33.0 37.0 7 35.89503162161135 37.0 35.0 37.0 35.0 37.0 8 35.62929082606656 37.0 35.0 37.0 33.0 37.0 9 37.45259850226903 39.0 37.0 39.0 35.0 39.0 10 37.14564669485918 39.0 37.0 39.0 34.0 39.0 11 37.14648063259124 39.0 37.0 39.0 34.0 39.0 12 37.051539825385454 39.0 37.0 39.0 33.0 39.0 13 36.94364471425707 39.0 37.0 39.0 33.0 39.0 14 38.12301199933921 40.0 37.0 41.0 33.0 41.0 15 38.11360546441232 40.0 37.0 41.0 33.0 41.0 16 38.02441211365228 40.0 37.0 41.0 33.0 41.0 17 37.93359064081577 40.0 36.0 41.0 33.0 41.0 18 37.85286564503405 40.0 36.0 41.0 33.0 41.0 19 37.72661771994004 40.0 36.0 41.0 33.0 41.0 20 37.71351942041328 40.0 36.0 41.0 33.0 41.0 21 37.8208305984475 40.0 36.0 41.0 33.0 41.0 22 37.90988525405507 40.0 36.0 41.0 33.0 41.0 23 37.92280068799863 40.0 36.0 41.0 34.0 41.0 24 37.836151554048264 40.0 36.0 41.0 33.0 41.0 25 37.66183559942366 40.0 36.0 41.0 33.0 41.0 26 37.63566285240274 40.0 36.0 41.0 33.0 41.0 27 37.62651868983435 40.0 36.0 41.0 33.0 41.0 28 37.4291113174361 40.0 35.0 41.0 33.0 41.0 29 37.41516671245668 40.0 35.0 41.0 33.0 41.0 30 37.25841380449637 40.0 35.0 41.0 32.0 41.0 31 37.237916074414805 40.0 35.0 41.0 32.0 41.0 32 37.115442954330426 40.0 35.0 41.0 32.0 41.0 33 37.00107864191827 40.0 35.0 41.0 31.0 41.0 34 36.92776544441195 40.0 35.0 41.0 31.0 41.0 35 36.78874166393546 40.0 35.0 41.0 31.0 41.0 36 36.72591541009153 39.0 35.0 41.0 31.0 41.0 37 36.69021510116354 39.0 35.0 41.0 31.0 41.0 38 36.53556382229706 39.0 35.0 41.0 30.0 41.0 39 36.46342732506522 39.0 35.0 41.0 30.0 41.0 40 36.28123489923399 39.0 35.0 41.0 30.0 41.0 41 36.191922288311005 39.0 35.0 41.0 30.0 41.0 42 36.205983503227536 39.0 35.0 41.0 30.0 41.0 43 36.217456330903666 39.0 35.0 41.0 30.0 41.0 44 36.168594117028675 39.0 35.0 41.0 30.0 41.0 45 36.202567362115374 39.0 35.0 41.0 30.0 41.0 46 36.055736899712805 39.0 35.0 41.0 30.0 41.0 47 35.908664383349866 38.0 35.0 40.0 30.0 41.0 48 35.85051577811956 38.0 35.0 40.0 29.0 41.0 49 35.82451087873538 38.0 35.0 40.0 29.0 41.0 50 35.70002358701001 38.0 35.0 40.0 29.0 41.0 51 34.58804889489999 37.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 14.0 9 22.0 10 30.0 11 27.0 12 32.0 13 26.0 14 34.0 15 62.0 16 110.0 17 158.0 18 405.0 19 808.0 20 1719.0 21 3120.0 22 4849.0 23 6370.0 24 7564.0 25 8743.0 26 10642.0 27 11625.0 28 12583.0 29 14210.0 30 17012.0 31 22500.0 32 29779.0 33 40582.0 34 71693.0 35 93498.0 36 83319.0 37 119184.0 38 204405.0 39 366626.0 40 228.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.12103404745141 16.39862576955933 19.531722761641337 15.948617421347922 2 28.143896662393914 31.900326772846494 22.6692367967957 17.286539767963895 3 28.76237103338489 31.334150191832183 24.239760631601822 15.663718143181102 4 25.873448182342607 22.33628009000167 33.90301410185172 17.88725762580401 5 29.85938785083469 26.397839535892448 23.922793620729713 19.819978992543145 6 23.35184663319726 37.07833802570543 25.121049065397855 14.448766275699459 7 73.71947712810926 5.529696222279742 16.13934534121216 4.61148130839883 8 73.17865437433026 10.587740585293544 10.634296219276154 5.599308821100038 9 67.81194704142038 6.897566120926271 11.58042684537434 13.710059992279009 10 40.90658925651447 23.131789547332595 19.669976209806013 16.29164498634692 11 32.732055983370714 24.56591509206443 23.49946421267532 19.20256471188953 12 27.519061749378743 19.71052466521022 29.175187878927083 23.595225706483955 13 25.821503755811726 21.227778960563757 32.94628257237988 20.00443471124464 14 20.845263030497915 28.44867263438633 28.584187515846143 22.121876819269616 15 19.01219015547108 23.466689753078455 35.89828079849538 21.62283929295508 16 21.89245560209156 24.53314063246756 28.536218428080378 25.038185337360495 17 21.206047108647773 25.785549025202766 29.075981091522017 23.932422774627444 18 22.191489418089912 24.935003211190313 27.686556022682403 25.186951348037372 19 23.489481695331804 27.041049348088613 24.948254340407374 24.52121461617221 20 26.457204594784884 25.678744923713246 28.411216109132763 19.4528343723691 21 24.352660252531187 28.63136153585888 27.318616334755326 19.697361876854604 22 21.665684610756912 23.47658392956053 29.292681224651695 25.56505023503086 23 23.785158558595167 26.428758837398924 28.056615891284203 21.729466712721702 24 24.678991394716686 24.444711430159042 26.62363877775118 24.252658397373096 25 21.69209852832959 29.968842178167616 24.958148516889448 23.380910776613348 26 21.143413437881797 24.357342318187882 28.370137608559876 26.12910663537044 27 24.790124198417107 25.401619641353772 25.66602383966487 24.14223232056425 28 20.943144704981275 26.64316210813098 28.21350926121421 24.20018392567353 29 22.766765107833272 24.494447335153744 27.075325602330082 25.663461954682905 30 22.259158517958372 26.541923480912633 29.897197739534036 21.30172026159496 31 25.93413835415675 24.906469112942908 24.42209616962859 24.737296363271756 32 26.12097927611731 29.719279244579628 23.716252686666447 20.443488792636614 33 23.4262296385357 27.558550114445584 23.94911919744094 25.066101049577778 34 22.64838835349419 26.16002593687692 24.946134159732644 26.24545154989624 35 21.10313000506193 27.642562273681754 25.99226664098892 25.262041080267387 36 21.740244297818244 28.17817291663538 24.1271260332568 25.954456752289573 37 21.155781158484388 27.7092596240743 28.43197621157283 22.702983005868482 38 23.335591914690998 28.568639524231454 23.290979779660223 24.804788781417322 39 23.92685730035628 26.404288418778087 24.059191910804 25.609662370061635 40 21.945636800682696 27.34246836734604 28.07534415391098 22.63655067806028 41 19.636141659871782 26.595634724672458 25.915763454975753 27.852460160480007 42 21.523809187272906 26.76772272277136 27.997692536699002 23.71077555325673 43 23.39831392631842 24.075269947587365 25.25356035756847 27.272855768525737 44 22.51384522151029 24.01113448217679 27.20032792127769 26.274692375035226 45 21.868515228639403 23.469781683229105 26.29518745489095 28.366515633240546 46 24.802491919019698 26.55685308649719 24.975463325733074 23.665191668750037 47 19.79824714062717 25.104087620000016 31.498994239292426 23.59867100008039 48 22.04802385909986 24.621569834776086 26.881152388869406 26.44925391725465 49 20.936165776926956 23.296280231347048 31.252081531547848 24.51547246017815 50 20.95931108262609 23.56881178891128 29.501165657666796 25.970711470795838 51 20.242513332844513 23.084615527319855 27.015165475684622 29.657705664151013 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 531.0 1 1433.0 2 2335.0 3 5309.0 4 8283.0 5 5542.0 6 2801.0 7 2752.0 8 2703.0 9 2801.5 10 2900.0 11 2790.5 12 2681.0 13 2673.5 14 2666.0 15 2672.5 16 2679.0 17 2800.5 18 2922.0 19 2938.5 20 2955.0 21 2962.0 22 2969.0 23 3290.5 24 3612.0 25 4574.0 26 6511.5 27 7487.0 28 8934.0 29 10381.0 30 12112.5 31 13844.0 32 16584.5 33 19325.0 34 21413.5 35 23502.0 36 25290.0 37 27078.0 38 30550.0 39 34022.0 40 36776.0 41 39530.0 42 45766.0 43 52002.0 44 56680.5 45 61359.0 46 111081.5 47 160804.0 48 128924.0 49 97044.0 50 96182.5 51 95321.0 52 84587.5 53 73854.0 54 68499.5 55 63145.0 56 61565.5 57 59986.0 58 58192.0 59 56398.0 60 54593.0 61 52788.0 62 49116.5 63 45445.0 64 37704.0 65 29963.0 66 25003.0 67 20043.0 68 17574.0 69 15105.0 70 12488.0 71 9871.0 72 8499.5 73 7128.0 74 6013.5 75 3874.5 76 2850.0 77 2217.0 78 1584.0 79 1217.5 80 851.0 81 675.5 82 500.0 83 337.5 84 175.0 85 119.0 86 63.0 87 43.5 88 24.0 89 24.5 90 25.0 91 14.0 92 3.0 93 3.5 94 4.0 95 3.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1131979.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.076332141903592 #Duplication Level Percentage of deduplicated Percentage of total 1 73.86518947169598 19.261332143885845 2 8.985710059359283 4.686287200773938 3 3.387810485495412 2.650250143608061 4 1.7963915417588805 1.8737320999924336 5 1.1958128792408287 1.559120690932495 6 0.8439509637852805 1.3204287385886775 7 0.6800115099319506 1.241254419531204 8 0.5999904388737276 1.251643997283026 9 0.5362200510512448 1.2584386937124685 >10 7.473201438230938 43.98601051548591 >50 0.5794082752085217 9.249582836710474 >100 0.048454604377325475 2.2964001247593746 >500 0.0034122960829084605 0.5750788130159403 >1k 0.0023886072580359225 1.7429434920866842 >5k 0.0010236888248725384 1.6258455935985243 >10k+ 0.0010236888248725384 5.421650496035009 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTC 27061 2.390592051619332 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGC 17216 1.5208762706728658 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCG 16654 1.4712287065396088 No Hit GAACTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCT 7579 0.6695353889073914 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGC 5678 0.5015994112964993 TruSeq Adapter, Index 19 (95% over 23bp) GAATGCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTT 5015 0.44302942015708774 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4556 0.4024809647528797 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCT 3706 0.32739123252286484 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTC 3330 0.29417506861876414 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTGAACACT 2899 0.25610015733507424 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTGAACACTCGTA 2502 0.22102883534058493 No Hit CCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGC 1517 0.1340130868152148 TruSeq Adapter, Index 19 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.4170430723538157E-4 0.0 0.0 0.10132696807979653 0.0 2 4.4170430723538157E-4 0.0 0.0 0.8455103849099674 0.0 3 4.4170430723538157E-4 0.0 0.0 1.111504718727114 0.0 4 4.4170430723538157E-4 0.0 0.0 2.0453559650841577 0.0 5 5.300451686824579E-4 0.0 0.0 5.094882502237232 0.0 6 5.300451686824579E-4 0.0 0.0 6.135714531806685 0.0 7 5.300451686824579E-4 0.0 0.0 6.937584531161797 0.0 8 5.300451686824579E-4 0.0 0.0 7.942461830122291 0.0 9 5.300451686824579E-4 0.0 0.0 8.281425715494722 0.0 10 5.300451686824579E-4 0.0 0.0 10.37846108452542 0.0 11 6.183860301295342E-4 0.0 0.0 11.122909523939931 0.0 12 6.183860301295342E-4 0.0 0.0 13.365177269189623 0.0 13 6.183860301295342E-4 0.0 0.0 13.8160690260155 0.0 14 6.183860301295342E-4 0.0 0.0 14.044253471133299 0.0 15 6.183860301295342E-4 0.0 0.0 14.467141174880453 0.0 16 6.183860301295342E-4 0.0 0.0 14.8811947924829 8.834086144707631E-5 17 7.067268915766105E-4 0.0 0.0 15.330319732079836 8.834086144707631E-5 18 7.950677530236868E-4 0.0 0.0 15.854622744768234 8.834086144707631E-5 19 7.950677530236868E-4 0.0 0.0 16.450393514367317 8.834086144707631E-5 20 8.834086144707631E-4 0.0 0.0 16.83723814664406 8.834086144707631E-5 21 8.834086144707631E-4 0.0 0.0 17.20597290232416 8.834086144707631E-5 22 8.834086144707631E-4 0.0 0.0 17.6973247736928 8.834086144707631E-5 23 8.834086144707631E-4 0.0 0.0 18.071359981059718 8.834086144707631E-5 24 8.834086144707631E-4 0.0 0.0 18.392390671558395 8.834086144707631E-5 25 8.834086144707631E-4 0.0 0.0 18.659886800020143 8.834086144707631E-5 26 8.834086144707631E-4 0.0 0.0 18.95609370845219 8.834086144707631E-5 27 8.834086144707631E-4 0.0 0.0 19.28905041524622 8.834086144707631E-5 28 9.717494759178395E-4 0.0 0.0 19.578720099931182 8.834086144707631E-5 29 9.717494759178395E-4 0.0 0.0 19.88641132035135 8.834086144707631E-5 30 9.717494759178395E-4 0.0 0.0 20.275994519332954 8.834086144707631E-5 31 9.717494759178395E-4 0.0 0.0 20.602944047548586 8.834086144707631E-5 32 0.0010600903373649158 0.0 0.0 20.914433925010975 8.834086144707631E-5 33 0.0010600903373649158 0.0 0.0 21.240941748919372 8.834086144707631E-5 34 0.0010600903373649158 0.0 0.0 21.571601593315776 8.834086144707631E-5 35 0.0010600903373649158 0.0 0.0 21.89033542141683 8.834086144707631E-5 36 0.0010600903373649158 0.0 0.0 22.202178662325007 8.834086144707631E-5 37 0.0010600903373649158 0.0 0.0 22.527626395896036 8.834086144707631E-5 38 0.0011484311988119921 0.0 0.0 22.85934633062981 8.834086144707631E-5 39 0.0011484311988119921 0.0 0.0 23.196278376188957 8.834086144707631E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCATC 20 7.03324E-4 45.000004 13 ATACCGG 40 6.8157533E-9 45.000004 2 AGTCGTA 20 7.03324E-4 45.000004 14 TACGACT 25 3.8907678E-5 45.0 30 ACGTAAG 30 2.1654723E-6 44.999996 1 GATGAAT 1565 0.0 40.97444 20 GCGCATC 55 6.184564E-11 40.909092 25 GTTTACG 100 0.0 40.5 1 CGCATCG 50 1.0822987E-9 40.5 21 CGATGAA 1505 0.0 40.066444 19 TCGATAG 45 1.9283107E-8 40.000004 1 TAGCCGT 85 0.0 39.705883 44 TACGGCT 1950 0.0 39.692307 7 CGTTGAT 40 3.4581535E-7 39.375004 25 CCGATGA 1515 0.0 39.356438 18 CGTTTTT 2265 0.0 39.039734 1 GCGAACC 70 0.0 38.571426 33 CACCGAT 1640 0.0 38.55183 16 GTTCGAC 30 1.139911E-4 37.499996 32 ACCCGTA 30 1.139911E-4 37.499996 40 >>END_MODULE