##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935609.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 962016 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06716520307354 33.0 31.0 34.0 30.0 34.0 2 32.11431202807438 33.0 31.0 34.0 30.0 34.0 3 32.039704121345174 33.0 31.0 34.0 30.0 34.0 4 35.75245837907062 37.0 35.0 37.0 33.0 37.0 5 35.836280269766824 37.0 35.0 37.0 35.0 37.0 6 35.78574888567342 37.0 35.0 37.0 35.0 37.0 7 36.044128164188535 37.0 35.0 37.0 35.0 37.0 8 35.8834281342514 37.0 35.0 37.0 35.0 37.0 9 37.70435522901906 39.0 38.0 39.0 35.0 39.0 10 37.36531928782889 39.0 37.0 39.0 34.0 39.0 11 37.32459127498919 39.0 37.0 39.0 34.0 39.0 12 37.200856326713904 39.0 37.0 39.0 34.0 39.0 13 37.13255704686824 39.0 37.0 39.0 33.0 39.0 14 38.133996731863085 40.0 37.0 41.0 33.0 41.0 15 38.28168138575658 40.0 38.0 41.0 33.0 41.0 16 38.143054793267474 40.0 37.0 41.0 33.0 41.0 17 38.19046772610851 40.0 37.0 41.0 33.0 41.0 18 38.053412833050594 40.0 37.0 41.0 33.0 41.0 19 37.829813641353155 39.0 37.0 41.0 33.0 41.0 20 37.858058493829624 40.0 35.0 41.0 33.0 41.0 21 37.781252078967505 40.0 35.0 41.0 33.0 41.0 22 37.908892367694506 40.0 35.0 41.0 34.0 41.0 23 37.94837403951701 40.0 35.0 41.0 34.0 41.0 24 37.88021924791272 40.0 35.0 41.0 34.0 41.0 25 37.62594593021322 39.0 35.0 41.0 33.0 41.0 26 37.71760552839038 40.0 35.0 41.0 34.0 41.0 27 37.71622717293683 40.0 35.0 41.0 34.0 41.0 28 37.56896558892991 40.0 35.0 41.0 33.0 41.0 29 37.46485817283704 40.0 35.0 41.0 33.0 41.0 30 37.25317770182617 39.0 35.0 41.0 33.0 41.0 31 37.17692429231946 39.0 35.0 41.0 33.0 41.0 32 37.018936275488144 39.0 35.0 41.0 32.0 41.0 33 36.77718457905066 39.0 35.0 41.0 31.0 41.0 34 36.50146775105612 39.0 35.0 41.0 30.0 41.0 35 36.34695368891993 39.0 35.0 41.0 30.0 41.0 36 36.164122010444736 39.0 35.0 41.0 30.0 41.0 37 36.12617357715464 39.0 35.0 41.0 30.0 41.0 38 35.96819803412833 39.0 35.0 41.0 29.0 41.0 39 35.87629103881848 39.0 35.0 41.0 29.0 41.0 40 35.76542282041047 39.0 35.0 41.0 28.0 41.0 41 35.56425776702259 38.0 35.0 41.0 27.0 41.0 42 35.592886189003096 38.0 35.0 41.0 27.0 41.0 43 35.507389689984365 38.0 35.0 41.0 27.0 41.0 44 35.43325162991052 38.0 35.0 40.0 27.0 41.0 45 35.42833279280178 38.0 35.0 40.0 27.0 41.0 46 35.31972649103549 38.0 35.0 40.0 26.0 41.0 47 35.22852218674117 38.0 35.0 40.0 26.0 41.0 48 35.112981488873366 38.0 34.0 40.0 26.0 41.0 49 35.046682175764225 37.0 34.0 40.0 26.0 41.0 50 34.89102468150218 37.0 34.0 40.0 25.0 41.0 51 33.69947589229285 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 24.0 10 33.0 11 28.0 12 36.0 13 46.0 14 32.0 15 41.0 16 76.0 17 160.0 18 326.0 19 584.0 20 1071.0 21 1835.0 22 2740.0 23 3959.0 24 5930.0 25 9513.0 26 13059.0 27 14856.0 28 14902.0 29 14990.0 30 16418.0 31 19619.0 32 24780.0 33 35063.0 34 63783.0 35 75029.0 36 70744.0 37 103428.0 38 180960.0 39 287738.0 40 205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.90860443069554 19.500403319695305 23.13267139008083 18.458320859528325 2 36.18099906862256 24.545537704154608 23.906255197418755 15.367208029804077 3 29.92590559824369 23.897523533912118 30.488682100921398 15.687888766922795 4 26.58344559757842 23.32799038685427 32.23106476399561 17.8574992515717 5 25.29677261085055 26.923564680836908 29.365519908192795 18.41414280011975 6 24.022677377507236 31.89292069986362 29.106688454246083 14.977713468383062 7 74.10739530319663 5.3503268136912485 15.469285334131659 5.072992548980474 8 75.75903103482686 5.961439310780694 13.554348368426306 4.725181285966138 9 70.08625636164055 6.452283537903735 15.399847819578886 8.061612280876826 10 39.710150350929716 24.074755513421813 21.813150716827995 14.401943418820476 11 29.979023217909056 22.902217842530685 29.067084123340987 18.051674816219272 12 26.21817100755081 19.673893157702157 33.113170674916006 20.994765159831022 13 25.00498952200379 20.828863553204936 35.36905831088048 18.797088613910788 14 19.838235538702058 24.605411968200112 35.076963376908495 20.479389116189335 15 18.7207905066028 22.757937497921034 38.68490752752553 19.836364467950638 16 23.7243455410305 24.04097229152114 32.364222632471815 19.87045953497655 17 23.383602767521538 23.659377806606127 30.960191930279745 21.996827495592587 18 24.833890496623756 22.47291105345441 31.999467784319595 20.693730665602235 19 23.82236885873 25.28804094734391 29.531941256694278 21.35764893723181 20 23.626530120081163 26.219418388051757 30.485875494794268 19.668175997072815 21 22.891303263147392 26.969094069121514 32.0093428799521 18.130259787778996 22 21.71783005688055 23.1278897648272 32.95101120979277 22.203268968499483 23 20.652671057446028 24.9356559558261 32.495717326946746 21.915955659781126 24 21.72832884276353 23.471647041213455 32.35403569171407 22.44598842430895 25 22.466362305824436 25.781899677344246 29.439323254498884 22.312414762332438 26 20.00569637095433 25.010082992382664 30.37849682333766 24.60572381332535 27 21.56939177726774 24.14471276984998 31.50259455144197 22.78330090144031 28 20.00226607457672 24.55801150916409 31.49978794531484 23.939934470944348 29 22.0373673618734 25.401552572930182 30.46123972990054 22.099840335295877 30 22.800868176828658 24.12194807570768 32.08636862588564 20.99081512157802 31 23.62268403020324 23.75667348568007 30.100954661876727 22.519687822239963 32 25.996760968632536 24.152716794731067 28.645365565645477 21.205156670990917 33 24.483480524232444 22.596089877923028 30.306148754282674 22.614280843561854 34 22.795151016199313 24.022157635631842 32.00414546119815 21.178545886970696 35 23.610314173568838 24.975468183481357 30.728075208728338 20.68614243422147 36 23.75054053155041 26.146966370621694 29.54846904833184 20.554024049496057 37 23.66457522536008 25.469950603732162 30.04835678408675 20.81711738682101 38 23.74024964241759 24.820793001363803 28.995047899411237 22.443909456807372 39 24.892517380168314 22.786627249442837 29.418429631108005 22.902425739280844 40 26.386775271928947 22.150255297209196 30.65583108804843 20.807138342813424 41 22.272602534677176 23.33994444998836 30.147523533912118 24.239929481422344 42 23.079241925290223 24.159681335861357 30.81528789541962 21.945788843428797 43 22.332268901972522 23.29503875195423 30.954578718025477 23.418113628047767 44 22.853570002993713 22.954088081695108 30.121432491767287 24.070909423543892 45 22.178945048731 22.80097212520374 29.27071899012075 25.749363835944518 46 23.147847852842364 23.832763696237897 28.88974819545621 24.129640255463528 47 20.61639307454346 23.9619715264611 32.11828077703489 23.30335462196055 48 21.715543192628814 24.59106709243921 30.339516182683035 23.353873532248944 49 22.922279878920932 22.43164354854805 31.473177161294615 23.172899411236404 50 21.493613411835145 22.726441140272094 31.370060373216248 24.409885074676513 51 20.702462329108872 22.943589295812128 29.899918504473938 26.454029870605062 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 482.0 1 994.5 2 1507.0 3 10701.5 4 19896.0 5 12753.0 6 5610.0 7 5411.0 8 5212.0 9 5204.0 10 5196.0 11 5202.5 12 5209.0 13 5053.0 14 4897.0 15 4760.0 16 4623.0 17 4492.0 18 4361.0 19 4212.5 20 4064.0 21 4170.0 22 4276.0 23 4579.5 24 4883.0 25 5261.5 26 6560.5 27 7481.0 28 8611.5 29 9742.0 30 11773.5 31 13805.0 32 15003.0 33 16201.0 34 19656.5 35 23112.0 36 25073.5 37 27035.0 38 27832.0 39 28629.0 40 31968.0 41 35307.0 42 39879.0 43 44451.0 44 49739.0 45 55027.0 46 72686.5 47 90346.0 48 89120.5 49 87895.0 50 86191.5 51 84488.0 52 74959.5 53 65431.0 54 60534.5 55 55638.0 56 53471.5 57 51305.0 58 48742.0 59 46179.0 60 41572.5 61 36966.0 62 33771.5 63 30577.0 64 27247.0 65 23917.0 66 20272.5 67 16628.0 68 13991.0 69 11354.0 70 9905.0 71 8456.0 72 7380.0 73 6304.0 74 5160.0 75 3370.0 76 2724.0 77 2278.0 78 1832.0 79 1292.5 80 753.0 81 532.0 82 311.0 83 216.5 84 122.0 85 101.5 86 81.0 87 55.0 88 29.0 89 17.5 90 6.0 91 6.5 92 7.0 93 5.5 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 962016.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.41598749336291 #Duplication Level Percentage of deduplicated Percentage of total 1 74.6031359886787 24.9293745916334 2 9.327781957096015 6.2339409043827345 3 3.579534617650098 3.5884105204636585 4 1.8920221081668045 2.528951484146723 5 1.3208920332015812 2.2069455830773377 6 1.00148729426841 2.0079412140021033 7 0.8043940680369714 1.8815735482081128 8 0.6427666547595586 1.7182945997276904 9 0.5682996970475006 1.709126601211909 >10 6.017937978272094 41.40770425633157 >50 0.20083174864997827 4.10247045744761 >100 0.03341981982007551 1.950774920626815 >500 0.0024986781173754473 0.5725724260084802 >1k 0.004685021470078963 3.798119423054066 >5k 0.0 0.0 >10k+ 3.123347646719309E-4 1.363799469677873 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13067 1.358293417157303 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGC 4589 0.4770190932375345 No Hit GAATCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTC 4176 0.4340884143299072 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCG 4039 0.41984748694408414 No Hit CGTTTCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTT 3912 0.40664604330905096 No Hit CGTTCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTC 3486 0.36236403552539664 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCT 2260 0.2349233276785417 No Hit CCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTGC 2190 0.2276469414230117 No Hit CGCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTG 2041 0.21215863353624057 No Hit GCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTGC 2010 0.20893623390879154 No Hit CGTCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCT 1502 0.15613045936865916 No Hit CTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTGCT 1474 0.15321990486644713 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCC 1441 0.1497896084888401 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1225 0.12733675947177592 No Hit GAACTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCT 1024 0.10644313608089678 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTC 1022 0.10623523933073879 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0789675015800153E-4 0.0 0.0 0.1625752586235572 0.0 2 2.0789675015800153E-4 0.0 0.0 0.7061213119116522 0.0 3 2.0789675015800153E-4 0.0 0.0 1.1266964374812893 0.0 4 2.0789675015800153E-4 0.0 0.0 1.6543383893822972 0.0 5 2.0789675015800153E-4 0.0 0.0 3.236120812959452 0.0 6 2.0789675015800153E-4 0.0 0.0 4.617074975883977 0.0 7 2.0789675015800153E-4 0.0 0.0 5.730050227854838 0.0 8 2.0789675015800153E-4 0.0 0.0 7.036265509097562 0.0 9 2.0789675015800153E-4 0.0 0.0 7.774818714033862 0.0 10 2.0789675015800153E-4 0.0 0.0 9.261384426038653 0.0 11 2.0789675015800153E-4 0.0 0.0 10.45689468782224 0.0 12 2.0789675015800153E-4 0.0 0.0 11.841279147124371 0.0 13 2.0789675015800153E-4 0.0 0.0 12.361332867644613 0.0 14 2.0789675015800153E-4 0.0 0.0 12.683572830389515 0.0 15 2.0789675015800153E-4 0.0 0.0 13.015168146891527 0.0 16 2.0789675015800153E-4 0.0 0.0 13.476283138741975 0.0 17 2.0789675015800153E-4 0.0 0.0 14.00839487077138 0.0 18 2.0789675015800153E-4 0.0 0.0 14.649028706383262 0.0 19 3.118451252370023E-4 0.0 0.0 15.112950304360842 0.0 20 4.1579350031600306E-4 0.0 0.0 15.556082227322623 0.0 21 4.1579350031600306E-4 0.0 0.0 16.03060655955826 0.0 22 4.1579350031600306E-4 0.0 0.0 16.541408874696472 0.0 23 4.1579350031600306E-4 0.0 0.0 17.03661893357283 0.0 24 4.1579350031600306E-4 0.0 0.0 17.442745235006488 0.0 25 5.197418753950039E-4 0.0 0.0 17.820701526793734 0.0 26 5.197418753950039E-4 0.0 0.0 18.19044589694974 0.0 27 5.197418753950039E-4 0.0 0.0 18.625989588530754 0.0 28 5.197418753950039E-4 0.0 0.0 19.013820975950505 0.0 29 5.197418753950039E-4 0.0 0.0 19.427743405515084 0.0 30 5.197418753950039E-4 0.0 0.0 19.97659082593221 0.0 31 5.197418753950039E-4 0.0 0.0 20.40516997638293 0.0 32 5.197418753950039E-4 5.197418753950039E-4 0.0 20.84747031234408 0.0 33 5.197418753950039E-4 5.197418753950039E-4 0.0 21.30369973056581 0.0 34 6.236902504740046E-4 5.197418753950039E-4 0.0 21.75649885240994 0.0 35 6.236902504740046E-4 5.197418753950039E-4 0.0 22.198175498120612 0.0 36 8.315870006320061E-4 5.197418753950039E-4 0.0 22.59983201942587 0.0 37 8.315870006320061E-4 5.197418753950039E-4 0.0 23.047225825765892 0.0 38 9.355353757110069E-4 5.197418753950039E-4 0.0 23.54285167814257 0.0 39 0.0011434321258690084 5.197418753950039E-4 0.0 24.265292884941623 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGTA 20 7.0327136E-4 45.0 39 ATAACGC 25 3.89033E-5 45.0 11 ATACGCG 25 3.89033E-5 45.0 1 CAATACG 20 7.0327136E-4 45.0 15 TCGCGAC 20 7.0327136E-4 45.0 24 CGTTTTT 5805 0.0 43.294575 1 TACGCGG 75 0.0 42.0 2 TCGTAAG 60 3.6379788E-12 41.250004 1 CGTTTCT 435 0.0 40.862072 1 CGTTCTG 430 0.0 40.813953 1 TTAAGCG 45 1.927765E-8 40.0 1 TCGATAG 40 3.457444E-7 39.375 1 TACGATC 40 3.457444E-7 39.375 11 TATTGCG 75 0.0 39.0 1 AATAGCG 35 6.2472245E-6 38.57143 1 CGTAAGG 135 0.0 38.333336 2 CCGATGA 285 0.0 37.894733 18 TAGCCGT 90 0.0 37.5 44 TACGTAG 85 0.0 37.058823 1 TACGGGA 360 0.0 36.875 4 >>END_MODULE