##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935608.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 545474 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.038857947399876 33.0 31.0 34.0 30.0 34.0 2 32.05458738638322 33.0 31.0 34.0 30.0 34.0 3 32.053524090974086 33.0 31.0 34.0 30.0 34.0 4 35.73526144234189 37.0 35.0 37.0 33.0 37.0 5 35.779925349329204 37.0 35.0 37.0 35.0 37.0 6 35.70881471894169 37.0 35.0 37.0 35.0 37.0 7 35.95311600552914 37.0 35.0 37.0 35.0 37.0 8 35.765565361502105 37.0 35.0 37.0 35.0 37.0 9 37.554935707293104 39.0 37.0 39.0 35.0 39.0 10 37.26183832776631 39.0 37.0 39.0 34.0 39.0 11 37.22030014262825 39.0 37.0 39.0 34.0 39.0 12 36.92966300868602 39.0 35.0 39.0 33.0 39.0 13 36.74168521322739 39.0 35.0 39.0 33.0 39.0 14 37.57011699916036 40.0 36.0 41.0 32.0 41.0 15 37.703098589483645 40.0 36.0 41.0 33.0 41.0 16 37.68168052006145 40.0 36.0 41.0 33.0 41.0 17 37.68412243296656 40.0 36.0 41.0 33.0 41.0 18 37.66814916934629 39.0 36.0 41.0 33.0 41.0 19 37.549256243193994 39.0 35.0 41.0 33.0 41.0 20 37.572989730032965 39.0 35.0 41.0 33.0 41.0 21 37.55900189559906 39.0 35.0 41.0 33.0 41.0 22 37.691792826055874 39.0 35.0 41.0 33.0 41.0 23 37.73262886957032 40.0 35.0 41.0 34.0 41.0 24 37.6833597935007 40.0 35.0 41.0 33.0 41.0 25 37.43588878663328 39.0 35.0 41.0 33.0 41.0 26 37.481504159684974 39.0 35.0 41.0 33.0 41.0 27 37.45353765715689 39.0 35.0 41.0 33.0 41.0 28 37.22471098530819 39.0 35.0 41.0 33.0 41.0 29 37.08434865823119 39.0 35.0 41.0 32.0 41.0 30 36.941256595181436 39.0 35.0 41.0 32.0 41.0 31 36.88567374430312 39.0 35.0 41.0 31.0 41.0 32 36.83081503426378 39.0 35.0 41.0 32.0 41.0 33 36.744592776190984 39.0 35.0 41.0 31.0 41.0 34 36.54223666022578 39.0 35.0 41.0 31.0 41.0 35 36.51230122792287 39.0 35.0 41.0 31.0 41.0 36 36.361703765899016 39.0 35.0 41.0 30.0 41.0 37 36.362585567781416 39.0 35.0 41.0 30.0 41.0 38 36.167118872760206 39.0 35.0 41.0 30.0 41.0 39 36.107775989323045 38.0 35.0 41.0 30.0 41.0 40 36.01667907177978 38.0 35.0 41.0 30.0 41.0 41 35.797493556063166 38.0 35.0 41.0 29.0 41.0 42 35.87798501853434 38.0 35.0 40.0 29.0 41.0 43 35.772748105317575 38.0 35.0 40.0 29.0 41.0 44 35.70988168088672 38.0 35.0 40.0 29.0 41.0 45 35.696546489841865 38.0 35.0 40.0 29.0 41.0 46 35.547663133348244 37.0 35.0 40.0 29.0 41.0 47 35.47047705298511 37.0 35.0 40.0 29.0 41.0 48 35.36801937397566 37.0 35.0 40.0 29.0 41.0 49 35.30912197464957 37.0 35.0 40.0 28.0 41.0 50 35.134354708015415 37.0 34.0 40.0 28.0 41.0 51 33.95192254809579 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 13.0 10 14.0 11 4.0 12 14.0 13 17.0 14 21.0 15 21.0 16 58.0 17 99.0 18 200.0 19 369.0 20 678.0 21 1209.0 22 1990.0 23 2582.0 24 3422.0 25 4366.0 26 5273.0 27 6347.0 28 6953.0 29 7869.0 30 9410.0 31 12019.0 32 15886.0 33 23151.0 34 44983.0 35 49119.0 36 40345.0 37 58256.0 38 98497.0 39 152183.0 40 97.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.78215276988454 19.437590059287885 23.156007435734793 12.624249735092782 2 31.444761803495673 27.31789232850695 23.20055584684146 18.036790021155912 3 30.85683277296443 26.98130433347877 25.720565966480528 16.44129692707627 4 27.350524497959572 23.334751060545507 30.045428379721123 19.269296061773797 5 27.869705980486696 27.035935718292713 25.05710629654209 20.0372520046785 6 24.653054041072537 35.00533480972512 25.368945174288783 14.972665974913562 7 76.05422073279387 5.6666312234863625 13.482035807389536 4.797112236330237 8 76.662682364329 8.640008506363273 9.521443735173445 5.175865394134275 9 71.4732507873886 6.780524827947803 11.196134004553837 10.550090380109776 10 44.986012165566095 22.961681033376475 17.613488452245203 14.438818348812227 11 36.65124277234112 22.32223717354081 22.805119950721757 18.221400103396313 12 31.223853015909096 19.39524156971735 28.042583147867727 21.338322266505827 13 29.24300699941702 21.57133062254113 30.795968277131447 18.3896941009104 14 22.014248158482346 25.85751108210474 31.423679222107744 20.704561537305167 15 20.132215284321525 21.346388645471645 37.33431840931007 21.18707766089676 16 25.95210770815841 23.37141641948104 27.63229778137913 23.044178090981422 17 25.677850823320636 22.730139291698595 27.70526184566084 23.88674803931993 18 28.77185713709544 21.073781701785972 28.305657098230164 21.848704062888423 19 26.520420771659143 24.18795396297532 25.739815279921686 23.551809985443853 20 26.81576023788485 25.891243212325428 27.307626028005 19.985370521784724 21 25.329163259843735 27.554750547230483 28.952617356647615 18.163468836278174 22 23.828450118612434 22.18290880958579 30.732170552583625 23.256470519218148 23 23.065993979548065 25.440625951007746 29.370969102102023 22.122410967342166 24 24.277600765572693 23.194139409027745 27.62588134356541 24.90237848183415 25 23.714420852322935 27.4849030384583 25.102021361238116 23.698654747980655 26 21.930651140109337 23.69132167619355 26.87204156385089 27.505985619846225 27 23.661806062250445 23.493512064736358 27.450987581442927 25.393694291570267 28 20.730777268944074 24.96470959202455 29.106061883792812 25.198451255238563 29 24.027359690837695 26.054220732793866 26.77249511434092 23.14592446202752 30 26.628950234108316 24.04165918082255 28.25817545840865 21.071215126660483 31 26.55965270572016 23.4135815822569 26.644166358066563 23.382599353956376 32 28.015634109050108 23.91259711736948 25.395344232722366 22.676424540858044 33 26.758195624356063 21.457301356251627 27.289293348537235 24.495209670855072 34 22.278788723202204 23.70213795707953 30.622724456161066 23.3963488635572 35 22.81043642776741 25.674734267811118 27.495169338960245 24.019659965461233 36 24.007927050601864 27.117882795513626 27.89537173174157 20.978818422142943 37 23.45336349670195 26.058070595482096 26.517487542944302 23.971078364871655 38 22.81355298327693 25.392411004007524 26.737663023352166 25.05637298936338 39 23.260503708701055 22.264672560012023 26.429674008293702 28.045149722993212 40 25.478941251095378 20.753509791484102 27.698662081052444 26.068886876368076 41 20.86423917546941 22.336903317115024 26.89385745241753 29.905000054998037 42 22.454965772887434 21.94366734253145 28.97864976149184 26.62271712308928 43 22.00801504746331 22.334886722373568 29.263906254010273 26.393191976152853 44 23.348133916556975 21.093031015227123 28.318856627446955 27.239978440768947 45 22.099495118007457 21.173328151295937 27.12319927255928 29.603977458137326 46 23.29093595661755 23.965028580647292 26.503004726164768 26.241030736570398 47 19.281028976633166 23.538977109816418 31.99125897842977 25.18873493512065 48 21.67546024191804 24.482743448816993 28.485684010603624 25.356112298661348 49 24.361564437535062 20.585582447559368 30.403648936521265 24.649204178384306 50 21.367104573270222 22.465232073389384 29.322754155101798 26.844909198238597 51 21.52348232913026 22.142943568346062 26.914390053421428 29.41918404910225 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 245.0 1 598.5 2 952.0 3 2356.0 4 3760.0 5 2428.0 6 1096.0 7 1108.0 8 1120.0 9 1156.5 10 1193.0 11 1183.5 12 1174.0 13 1155.0 14 1136.0 15 1138.0 16 1140.0 17 1169.5 18 1199.0 19 1246.5 20 1294.0 21 1344.5 22 1395.0 23 1363.0 24 1331.0 25 1658.0 26 2629.5 27 3274.0 28 3491.0 29 3708.0 30 4489.5 31 5271.0 32 6187.5 33 7104.0 34 8432.5 35 9761.0 36 10808.5 37 11856.0 38 12931.5 39 14007.0 40 15446.5 41 16886.0 42 19291.5 43 21697.0 44 24454.0 45 27211.0 46 42214.5 47 57218.0 48 52166.0 49 47114.0 50 48714.5 51 50315.0 52 45552.0 53 40789.0 54 39225.5 55 37662.0 56 36837.0 57 36012.0 58 35228.0 59 34444.0 60 30735.5 61 27027.0 62 24570.5 63 22114.0 64 19264.5 65 16415.0 66 14641.5 67 12868.0 68 10664.0 69 8460.0 70 7288.5 71 6117.0 72 5114.0 73 4111.0 74 3159.0 75 1800.0 76 1393.0 77 1066.0 78 739.0 79 565.5 80 392.0 81 270.5 82 149.0 83 104.5 84 60.0 85 55.0 86 50.0 87 29.5 88 9.0 89 7.0 90 5.0 91 3.5 92 2.0 93 4.0 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 545474.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.16506693128535 #Duplication Level Percentage of deduplicated Percentage of total 1 74.70605996465795 24.77631478900498 2 9.066654663848645 6.013924175387817 3 3.3563453486786985 3.339402544003119 4 1.8206601893651535 2.415292681576879 5 1.1895289598843068 1.972540378563264 6 0.8986055961423804 1.7881388844533774 7 0.7522019225545166 1.7462778975153446 8 0.6469347163298694 1.716450653380178 9 0.5798654312508931 1.7308148254717062 >10 6.858806708205749 45.054788882670024 >50 0.07715523826954276 1.7195898250693609 >100 0.03774500864984803 2.0990004480720224 >500 0.0049956629095387105 1.197324935472762 >1k 0.003330441939692473 2.2598955885399183 >5k 0.0011101473132308244 2.170243490819248 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGC 5954 1.0915277355107669 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCG 5835 1.0697118469441258 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTC 4917 0.9014178494300369 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2217 0.4064355038003645 No Hit GCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGC 1805 0.33090486439316996 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1243 0.22787520578432702 No Hit CCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGC 1055 0.1934097683849276 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCT 1039 0.1904765396700851 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTCTCCTT 974 0.17856029801603743 No Hit GAACTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCT 948 0.17379380135441835 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTA 825 0.1512446056090666 No Hit CTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGCT 796 0.14592812856341456 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTC 675 0.12374558640741813 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTT 625 0.1145792466735353 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCC 586 0.10742950168110671 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 574 0.10522958014497483 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.33307178710626E-4 0.0 0.0 0.1534445271451985 0.0 2 7.33307178710626E-4 0.0 0.0 0.8434865823118975 0.0 3 9.166339733882824E-4 0.0 0.0 1.17732467541991 0.0 4 9.166339733882824E-4 0.0 0.0 1.7130055694680224 0.0 5 9.166339733882824E-4 0.0 0.0 3.473126125168202 0.0 6 9.166339733882824E-4 0.0 0.0 4.283980538027477 0.0 7 9.166339733882824E-4 0.0 0.0 5.115184225095971 0.0 8 9.166339733882824E-4 0.0 0.0 6.14401419682698 0.0 9 9.166339733882824E-4 0.0 0.0 6.630930163490835 0.0 10 9.166339733882824E-4 0.0 0.0 8.548345109024444 0.0 11 9.166339733882824E-4 0.0 0.0 9.710636987280788 0.0 12 9.166339733882824E-4 0.0 0.0 11.696982807613194 0.0 13 0.001099960768065939 0.0 0.0 12.22148076718597 0.0 14 0.001099960768065939 0.0 0.0 12.537902814799606 0.0 15 0.001099960768065939 0.0 0.0 12.992736592394872 0.0 16 0.001099960768065939 0.0 0.0 13.519617800298455 0.0 17 0.001099960768065939 0.0 0.0 14.105163582498891 0.0 18 0.001099960768065939 0.0 0.0 14.81793816020562 0.0 19 0.001099960768065939 0.0 0.0 15.415400184060102 0.0 20 0.001099960768065939 0.0 0.0 15.875183785111664 0.0 21 0.001099960768065939 0.0 0.0 16.35989983023939 0.0 22 0.001099960768065939 0.0 0.0 16.884397789812162 0.0 23 0.001099960768065939 0.0 0.0 17.330798534852256 0.0 24 0.0012832875627435956 0.0 0.0 17.73100092763358 0.0 25 0.001466614357421252 0.0 0.0 18.093804654300662 0.0 26 0.001466614357421252 0.0 0.0 18.471641178131314 0.0 27 0.001466614357421252 0.0 0.0 18.979273072593745 0.0 28 0.001466614357421252 0.0 0.0 19.36040947872859 0.0 29 0.001466614357421252 0.0 0.0 19.769044904065087 0.0 30 0.001466614357421252 0.0 0.0 20.344324385763574 0.0 31 0.001466614357421252 0.0 0.0 20.743060164187476 0.0 32 0.001466614357421252 0.0 0.0 21.150045648371876 0.0 33 0.0016499411520989084 0.0 0.0 21.60267950443101 0.0 34 0.0016499411520989084 0.0 0.0 22.100411751980847 0.0 35 0.0016499411520989084 0.0 0.0 22.572111594686458 0.0 36 0.0016499411520989084 0.0 0.0 22.981113673612306 0.0 37 0.0016499411520989084 0.0 0.0 23.401482013808174 0.0 38 0.0016499411520989084 0.0 0.0 23.920113515951265 0.0 39 0.0016499411520989084 0.0 0.0 24.875246116221856 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCACG 20 7.030022E-4 45.000004 1 TAGACGG 20 7.030022E-4 45.000004 2 GACGTAG 20 7.030022E-4 45.000004 9 GGACGTA 30 2.163395E-6 45.000004 8 ATCGGAT 30 2.163395E-6 45.000004 25 CGTCAAG 20 7.030022E-4 45.000004 10 TATTACG 25 3.8881015E-5 45.0 1 AACGAAG 45 3.8380676E-10 45.0 1 CGACAGG 55 6.002665E-11 40.909092 2 CGCGAAT 50 1.0786607E-9 40.5 27 CCGATGA 325 0.0 40.153843 18 TACGAAT 90 0.0 40.0 12 GTCATAC 40 3.4537698E-7 39.375004 39 CACGCCA 40 3.4537698E-7 39.375004 27 CCATAGG 40 3.4537698E-7 39.375004 2 CGTCATA 40 3.4537698E-7 39.375004 38 TAGGGTA 75 0.0 39.000004 5 AGGGTAC 110 0.0 38.863636 6 AACGGGA 180 0.0 38.75 4 ATTACGG 35 6.242253E-6 38.571426 2 >>END_MODULE