##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935601.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 587581 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27093796429769 33.0 31.0 34.0 30.0 34.0 2 32.2885457494371 34.0 31.0 34.0 30.0 34.0 3 32.30896846562431 34.0 31.0 34.0 30.0 34.0 4 35.9410821656929 37.0 35.0 37.0 35.0 37.0 5 35.98616020599713 37.0 35.0 37.0 35.0 37.0 6 35.929497379935704 37.0 35.0 37.0 35.0 37.0 7 36.164785791235595 37.0 35.0 37.0 35.0 37.0 8 35.96897278843257 37.0 35.0 37.0 35.0 37.0 9 37.81065248876325 39.0 38.0 39.0 35.0 39.0 10 37.48558751899738 39.0 37.0 39.0 35.0 39.0 11 37.47819279384459 39.0 37.0 39.0 35.0 39.0 12 37.344907340434766 39.0 37.0 39.0 35.0 39.0 13 37.298903470330046 39.0 37.0 39.0 34.0 39.0 14 38.473948272663684 40.0 38.0 41.0 34.0 41.0 15 38.58910856545736 40.0 38.0 41.0 35.0 41.0 16 38.38325099007626 40.0 37.0 41.0 34.0 41.0 17 38.42887363614548 40.0 38.0 41.0 34.0 41.0 18 38.34424700594471 40.0 37.0 41.0 34.0 41.0 19 38.19268662533336 40.0 37.0 41.0 34.0 41.0 20 38.33243927220247 40.0 37.0 41.0 34.0 41.0 21 38.266880651348494 40.0 37.0 41.0 34.0 41.0 22 38.352131876285995 40.0 37.0 41.0 34.0 41.0 23 38.368718525616046 40.0 37.0 41.0 34.0 41.0 24 38.30061727659676 40.0 37.0 41.0 34.0 41.0 25 38.0336208965232 40.0 36.0 41.0 34.0 41.0 26 38.11005631563989 40.0 37.0 41.0 34.0 41.0 27 38.11692005017181 40.0 37.0 41.0 34.0 41.0 28 38.00869326952369 40.0 36.0 41.0 34.0 41.0 29 37.98080434867703 40.0 36.0 41.0 34.0 41.0 30 37.822238976413466 40.0 36.0 41.0 33.0 41.0 31 37.76984279614215 40.0 36.0 41.0 33.0 41.0 32 37.695917669223476 40.0 36.0 41.0 33.0 41.0 33 37.644854071183374 40.0 36.0 41.0 33.0 41.0 34 37.5562671359353 40.0 36.0 41.0 33.0 41.0 35 37.4934332457993 40.0 35.0 41.0 33.0 41.0 36 37.37107564744265 40.0 35.0 41.0 33.0 41.0 37 37.33372079764322 40.0 35.0 41.0 33.0 41.0 38 37.193632877850035 40.0 35.0 41.0 33.0 41.0 39 37.15387495511257 40.0 35.0 41.0 33.0 41.0 40 37.02646273449958 39.0 35.0 41.0 32.0 41.0 41 36.90243047341558 39.0 35.0 41.0 32.0 41.0 42 36.89578287929664 39.0 35.0 41.0 32.0 41.0 43 36.822038153037624 39.0 35.0 41.0 32.0 41.0 44 36.70565760295176 39.0 35.0 41.0 31.0 41.0 45 36.666677445322435 39.0 35.0 41.0 31.0 41.0 46 36.56482425401774 39.0 35.0 41.0 31.0 41.0 47 36.48833267243155 39.0 35.0 41.0 31.0 41.0 48 36.37899455564424 38.0 35.0 41.0 31.0 41.0 49 36.31427156426093 38.0 35.0 41.0 31.0 41.0 50 36.20656045719654 38.0 35.0 40.0 31.0 41.0 51 35.11983369101451 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 13.0 10 17.0 11 13.0 12 15.0 13 16.0 14 19.0 15 38.0 16 43.0 17 97.0 18 156.0 19 264.0 20 479.0 21 756.0 22 1165.0 23 1565.0 24 2300.0 25 2997.0 26 4045.0 27 4759.0 28 5507.0 29 6026.0 30 7393.0 31 9254.0 32 11888.0 33 17021.0 34 34966.0 35 49086.0 36 40127.0 37 60872.0 38 111238.0 39 215274.0 40 162.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.31351762565502 20.235167576895783 24.19955716743734 12.251757630011863 2 31.766003325498954 25.926638199669494 24.450246008635403 17.857112466196153 3 33.00430068365042 24.413825498101538 25.97667385432817 16.605199963919866 4 29.372460988357354 25.037058720414716 25.895323368182428 19.695156923045502 5 26.21698114813107 29.867371477294196 24.012008557118083 19.903638817456656 6 26.421718877907896 35.01866125691607 23.06286282231726 15.496757042858771 7 79.57149737653192 6.775236095108589 8.981229821930933 4.67203670642856 8 81.23084306674315 6.54548053800242 8.004683609578935 4.218992785675507 9 74.61660605091043 8.419094558877841 10.15859941012388 6.805699980087852 10 42.17120703358345 26.63037096162061 16.589882926779456 14.608539078016477 11 33.05450652761066 27.10298665205308 22.210724989405715 17.631781830930542 12 30.585400140576365 23.588917953439612 26.19332483521421 19.632357070769817 13 26.446736705237235 24.668258503933927 27.492720152625765 21.392284638203073 14 20.73399241976851 28.85134134698025 27.520971576684744 22.8936946565665 15 20.53282866532444 26.85944576152054 32.021627656442256 20.58609791671276 16 23.729664505829835 24.872145287202958 31.547990830200433 19.850199376766778 17 23.309637309579443 24.583163853153863 28.3513251789966 23.755873658270094 18 24.85393503193602 25.50048418856294 27.02844373796974 22.617137041531297 19 25.797124141182238 28.434037179554817 24.610904709308162 21.157933969954783 20 28.74395189769581 25.364332747314837 26.053429229331787 19.83828612565757 21 26.893994189737246 26.977897515406386 25.18988871321571 20.93821958164066 22 24.641198404985865 25.086583807168715 26.3755975771851 23.89662021066032 23 25.43479111816073 27.107071195290523 26.067895319964396 21.390242366584353 24 24.97408867883747 24.911459015863343 26.89978062599029 23.214671679308896 25 23.855604588984328 26.80889953895718 25.59340754721477 23.742088324843724 26 23.20599202492933 27.543266375189123 26.571315273979245 22.679426325902302 27 23.986650351185624 27.585132943372916 26.68738437764325 21.74083232779821 28 21.847030451971726 29.53431101414103 27.426176135715757 21.192482398171485 29 23.31457279932469 28.54738325439386 26.823706008192914 21.314337938088535 30 24.49704806656444 26.617606764003597 26.876975259581233 22.008369909850728 31 25.180698490931462 27.522162901795667 24.57976006712266 22.71737854015021 32 25.939742775889624 29.45142882428125 24.318008921323187 20.29081947850594 33 25.83984165587383 28.156288239408696 23.737663403003157 22.266206701714317 34 23.05894846838138 28.921799717826136 26.065682859044117 21.953568954748366 35 24.017284425466446 27.465489864376146 25.59817284765845 22.91905286249896 36 24.17402877220332 30.519026312967913 24.10391077996055 21.203034134868215 37 24.959622588204862 30.140865684901314 24.28243935729712 20.617072369596702 38 23.685755666027323 29.174360641341362 24.78160457877297 22.358279113858345 39 24.8476380277783 26.853999703870617 25.11874958516358 23.179612683187507 40 24.5526999681746 25.786232025882388 27.580708021532352 22.08035998441066 41 21.513119042310763 28.06319469145531 27.343123756554416 23.080562509679517 42 23.46280768098356 27.807229981908876 25.794571301658838 22.93539103544873 43 24.503174881420602 26.96938805032838 25.539287349318645 22.98814971893237 44 23.957377791317285 27.240329418412102 25.978716125946892 22.823576664323728 45 23.639123797399847 26.5318313560173 25.17440148677374 24.654643359809118 46 22.817960417372245 28.427059418190854 25.130492646971227 23.624487517465678 47 22.843659001907824 27.71532775906641 27.356909089980785 22.084104149044983 48 23.798420983660126 26.36028054004469 26.68244888789801 23.158849588397175 49 22.24510322832086 26.89620665065753 27.34754867839498 23.511141442626634 50 21.311955287866695 26.854850650378413 27.60657679536949 24.2266172663854 51 20.876951433079014 26.532682302525103 26.04764279307874 26.54272347131715 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 277.0 1 831.5 2 1386.0 3 2411.0 4 3436.0 5 2327.5 6 1219.0 7 1207.0 8 1195.0 9 1209.5 10 1224.0 11 1244.0 12 1264.0 13 1295.5 14 1327.0 15 1220.5 16 1114.0 17 1226.5 18 1339.0 19 1279.5 20 1220.0 21 1673.5 22 2127.0 23 2279.0 24 2431.0 25 2956.0 26 4305.0 27 5129.0 28 6360.5 29 7592.0 30 8674.5 31 9757.0 32 11712.0 33 13667.0 34 14558.5 35 15450.0 36 17040.0 37 18630.0 38 19128.5 39 19627.0 40 22414.5 41 25202.0 42 27679.0 43 30156.0 44 33020.0 45 35884.0 46 39877.5 47 43871.0 48 44975.0 49 46079.0 50 45431.0 51 44783.0 52 41375.0 53 37967.0 54 35877.5 55 33788.0 56 33591.5 57 33395.0 58 32912.0 59 32429.0 60 32044.0 61 31659.0 62 29004.5 63 26350.0 64 22671.5 65 18993.0 66 15330.0 67 11667.0 68 9856.5 69 8046.0 70 6786.0 71 5526.0 72 4553.0 73 3580.0 74 3020.5 75 1940.0 76 1419.0 77 1142.0 78 865.0 79 587.5 80 310.0 81 241.5 82 173.0 83 113.5 84 54.0 85 36.0 86 18.0 87 12.0 88 6.0 89 6.5 90 7.0 91 3.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 587581.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.04308411777322 #Duplication Level Percentage of deduplicated Percentage of total 1 73.28752057799089 19.086330631956525 2 8.198764637541107 4.2704223423461505 3 2.8787019025515375 2.2491082739443047 4 1.5850722073631969 1.6512067531641683 5 1.0754423769533343 1.400391814340683 6 0.8788015480640421 1.3732021583436704 7 0.7520465730088841 1.3709928512947414 8 0.7112361922679686 1.4818227186271546 9 0.6410916934846234 1.5026404410563157 >10 9.645741069999984 57.00752451161708 >50 0.28787505867166796 4.608615211515069 >100 0.052460147366135405 2.5681596216839697 >500 0.0026230073683067697 0.4628083903952359 >1k 0.0026230073683067697 0.966774279714919 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1882 0.32029626553615587 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGC 1347 0.2292449892014888 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCG 1321 0.22482006736092558 No Hit GAATCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTC 1111 0.18908031403329922 No Hit GCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC 813 0.1383639021683819 No Hit CCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC 688 0.11709023947336623 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 638 0.10858077439535996 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.509465078006266E-4 0.0 0.0 0.08543502938318291 0.0 2 8.509465078006266E-4 0.0 0.0 0.4401095338344841 0.0 3 8.509465078006266E-4 0.0 0.0 0.6210207613928973 0.0 4 8.509465078006266E-4 0.0 0.0 0.8461812073569431 0.0 5 8.509465078006266E-4 0.0 0.0 1.5538283232439443 0.0 6 8.509465078006266E-4 0.0 0.0 1.9944484249831087 0.0 7 8.509465078006266E-4 0.0 0.0 2.4047748310445707 0.0 8 8.509465078006266E-4 0.0 0.0 3.010648744598617 0.0 9 8.509465078006266E-4 0.0 0.0 3.255040581638957 0.0 10 8.509465078006266E-4 0.0 0.0 3.9359679771810185 0.0 11 8.509465078006266E-4 0.0 0.0 4.558350252986397 0.0 12 8.509465078006266E-4 0.0 0.0 5.25561582147823 0.0 13 0.0010211358093607519 0.0 0.0 5.467331312619026 0.0 14 0.0010211358093607519 0.0 0.0 5.558722967556814 0.0 15 0.0010211358093607519 0.0 0.0 5.770268269396049 0.0 16 0.0010211358093607519 0.0 0.0 6.101116271628933 0.0 17 0.0010211358093607519 0.0 0.0 6.500039994485866 0.0 18 0.0010211358093607519 0.0 0.0 6.939979339018791 0.0 19 0.0010211358093607519 0.0 0.0 7.235087587924048 0.0 20 0.0010211358093607519 0.0 0.0 7.510624067149891 0.0 21 0.0010211358093607519 0.0 0.0 7.819687838783079 0.0 22 0.0010211358093607519 0.0 0.0 8.173171018123458 0.0 23 0.0010211358093607519 0.0 0.0 8.51474094635463 0.0 24 0.0010211358093607519 0.0 0.0 8.813763549195771 0.0 25 0.0010211358093607519 0.0 0.0 9.063261065282914 0.0 26 0.0010211358093607519 0.0 0.0 9.30271741257801 0.0 27 0.0010211358093607519 0.0 0.0 9.550853414252673 0.0 28 0.0010211358093607519 0.0 0.0 9.816518913988029 0.0 29 0.0010211358093607519 0.0 0.0 10.080652710009343 0.0 30 0.0010211358093607519 0.0 0.0 10.409288251321945 0.0 31 0.0010211358093607519 0.0 0.0 10.711884829495848 0.0 32 0.0010211358093607519 0.0 0.0 11.003248913766782 0.0 33 0.0010211358093607519 0.0 0.0 11.290698644101834 0.0 34 0.0010211358093607519 0.0 0.0 11.5716811809776 0.0 35 0.0010211358093607519 0.0 0.0 11.88244684562639 0.0 36 0.0010211358093607519 0.0 0.0 12.202062353956306 0.0 37 0.0011913251109208773 0.0 0.0 12.521507672984661 0.0 38 0.0013615144124810026 0.0 0.0 12.827337847888206 0.0 39 0.0013615144124810026 0.0 0.0 13.149336006439963 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACAC 25 3.888469E-5 45.000004 30 CGTAAGG 100 0.0 45.000004 2 ATACGTA 25 3.888469E-5 45.000004 27 GTAACGG 45 3.8380676E-10 45.000004 2 CGTGCCG 20 7.030468E-4 45.0 27 GTTTACG 20 7.030468E-4 45.0 1 TTTCGAT 20 7.030468E-4 45.0 13 AAGCGTG 20 7.030468E-4 45.0 34 TCTAGCG 35 1.2105738E-7 45.0 1 CCGTAAT 20 7.030468E-4 45.0 11 CGTAGAT 20 7.030468E-4 45.0 30 GAACGTT 20 7.030468E-4 45.0 37 CGTAATT 20 7.030468E-4 45.0 12 TATAGCG 20 7.030468E-4 45.0 1 AACTCGA 20 7.030468E-4 45.0 11 TACGTTG 20 7.030468E-4 45.0 1 TAATGCG 30 2.1636843E-6 44.999996 1 GCGTAAG 65 0.0 41.53846 1 AACGGGC 105 0.0 40.714287 4 TTTACGG 50 1.0804797E-9 40.500004 2 >>END_MODULE