##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935599.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 567867 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.25064671833369 33.0 31.0 34.0 30.0 34.0 2 32.27456429058213 34.0 31.0 34.0 30.0 34.0 3 32.28866266220788 34.0 31.0 34.0 30.0 34.0 4 35.90722827704374 37.0 35.0 37.0 35.0 37.0 5 35.96081829019823 37.0 35.0 37.0 35.0 37.0 6 35.89882666187681 37.0 35.0 37.0 35.0 37.0 7 36.14832874599158 37.0 35.0 37.0 35.0 37.0 8 35.98805001875439 37.0 35.0 37.0 35.0 37.0 9 37.83937788249713 39.0 38.0 39.0 35.0 39.0 10 37.50622064673594 39.0 37.0 39.0 35.0 39.0 11 37.431844076165724 39.0 37.0 39.0 35.0 39.0 12 37.210956086548435 39.0 37.0 39.0 34.0 39.0 13 37.122454729716644 39.0 37.0 39.0 34.0 39.0 14 38.088286517793776 40.0 37.0 41.0 33.0 41.0 15 38.28640861328445 40.0 37.0 41.0 33.0 41.0 16 38.12239133459067 40.0 37.0 41.0 33.0 41.0 17 38.223883409319434 40.0 37.0 41.0 34.0 41.0 18 38.14722989714141 40.0 37.0 41.0 34.0 41.0 19 38.02633363093823 40.0 36.0 41.0 34.0 41.0 20 38.16642101055353 40.0 36.0 41.0 34.0 41.0 21 38.060084491615115 40.0 36.0 41.0 34.0 41.0 22 38.16253805908778 40.0 36.0 41.0 34.0 41.0 23 38.19916635409348 40.0 36.0 41.0 34.0 41.0 24 38.13691762331673 40.0 36.0 41.0 34.0 41.0 25 37.86661313300473 40.0 35.0 41.0 34.0 41.0 26 37.93792384484395 40.0 36.0 41.0 34.0 41.0 27 37.95290622628186 40.0 36.0 41.0 34.0 41.0 28 37.847522395208735 40.0 35.0 41.0 34.0 41.0 29 37.82332834977204 40.0 35.0 41.0 34.0 41.0 30 37.661841593189955 40.0 35.0 41.0 33.0 41.0 31 37.58917316906952 40.0 35.0 41.0 33.0 41.0 32 37.522703379488505 40.0 35.0 41.0 33.0 41.0 33 37.451903350608504 40.0 35.0 41.0 33.0 41.0 34 37.33428073827146 40.0 35.0 41.0 33.0 41.0 35 37.22354530198092 40.0 35.0 41.0 33.0 41.0 36 37.10649500675334 40.0 35.0 41.0 32.0 41.0 37 37.07971760993331 40.0 35.0 41.0 32.0 41.0 38 36.93261802499529 39.0 35.0 41.0 32.0 41.0 39 36.85396052244628 39.0 35.0 41.0 32.0 41.0 40 36.74623283268794 39.0 35.0 41.0 31.0 41.0 41 36.56987287516267 39.0 35.0 41.0 31.0 41.0 42 36.59238871073685 39.0 35.0 41.0 31.0 41.0 43 36.52992337994636 39.0 35.0 41.0 31.0 41.0 44 36.40911164057781 39.0 35.0 41.0 31.0 41.0 45 36.37143908696931 39.0 35.0 41.0 31.0 41.0 46 36.250146601228806 38.0 35.0 41.0 31.0 41.0 47 36.17177085479523 38.0 35.0 41.0 31.0 41.0 48 36.06985790686904 38.0 35.0 41.0 30.0 41.0 49 36.01332706425976 38.0 35.0 40.0 30.0 41.0 50 35.89147282726413 38.0 35.0 40.0 30.0 41.0 51 34.72697128024696 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 8.0 9 18.0 10 20.0 11 21.0 12 18.0 13 17.0 14 27.0 15 32.0 16 45.0 17 91.0 18 148.0 19 253.0 20 438.0 21 754.0 22 1095.0 23 1672.0 24 2396.0 25 3275.0 26 4379.0 27 5085.0 28 5733.0 29 6660.0 30 7692.0 31 9859.0 32 13287.0 33 19567.0 34 39282.0 35 47831.0 36 39576.0 37 59085.0 38 103696.0 39 195646.0 40 159.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.93012272239803 20.4760973960452 24.36538837439048 12.22839150716629 2 32.69744500032578 23.96388590990496 25.283208920398614 18.055460169370647 3 33.05351429119847 23.18025171386962 26.05152262765753 17.71471136727438 4 29.19644916855531 25.529041131109924 25.640863089420584 19.633646610914177 5 25.652485529182005 29.257202830944568 25.031917684950876 20.058393954922543 6 26.11474165605679 33.76600506808813 24.854059137086676 15.26519413876841 7 80.41900656315651 6.1253779494142115 8.721056162798684 4.734559324630591 8 82.0299471531186 5.454622297122389 8.170751249852518 4.344679299906492 9 76.16202385417712 7.520775111073544 10.246061137555095 6.071139897194238 10 44.359682813053055 24.374897643286193 17.024937177191138 14.240482366469614 11 34.0602641111387 24.796123035851707 23.000632190283994 18.142980662725602 12 30.063201418642045 23.026166338244693 27.588678334891796 19.321953908221467 13 27.3704934430069 23.330639040479547 29.4940540654766 19.80481345103695 14 22.36157410097787 25.123840617609407 31.14972343876295 21.364861842649777 15 21.177670123462008 24.605585462793226 33.922731907295194 20.294012506449572 16 27.006675858959934 24.150373238804157 29.06736964817466 19.77558125406125 17 27.035731958363492 23.777222483433622 26.979909027994232 22.207136530208658 18 27.200911481033412 22.795478518737664 29.51307260326802 20.49053739696091 19 27.095781230464176 25.14197866754011 26.54389143936873 21.218348662626987 20 26.32553044991169 27.396203688539742 26.775459746736473 19.502806114812095 21 26.61450656579798 25.326176728001453 29.252096001352427 18.80722070484814 22 25.001628902542322 23.492296611706614 30.00667409798421 21.499400387766855 23 23.74658150588078 25.612511380305598 29.694805297719363 20.946101816094263 24 24.40324935240118 25.437646491167826 28.353117895563575 21.80598626086742 25 25.240593307940063 25.62395772249488 26.903834876828554 22.231614092736503 26 22.544891673578498 25.648259187450584 27.19122611456556 24.615623024405362 27 22.749164857264113 25.34149721677787 29.527864799328015 22.381473126630002 28 20.428198856422366 26.618204614812974 28.917686711853303 24.035909816911357 29 23.005034629587563 26.959305612053523 28.253622767302904 21.782036991056003 30 24.800525475155276 24.864801088987388 28.44116668163496 21.89350675422238 31 25.542072351448493 25.783502122856234 27.264834899721237 21.40959062597404 32 26.631588030295827 26.46306265375519 26.238890444417446 20.66645887153154 33 26.103647509011797 25.215235257551505 26.132527510843207 22.548589722593494 34 23.328525869613838 25.627127478793447 28.951321348132574 22.09302530346014 35 22.751630223274113 27.702613464068172 27.63129394735035 21.91446236530737 36 24.994408902084466 28.0320920215473 25.30117087275718 21.67232820361106 37 23.307041965812417 28.9287808588983 25.989536282263277 21.774640893026007 38 23.377833189813813 28.637691572146295 26.23360751725316 21.750867720786733 39 23.172855615839623 26.292071911204562 26.548293878672297 23.98677859428352 40 25.744760656984823 24.358344471504772 26.96071439263067 22.936180478879738 41 21.8832930950381 25.40383575731641 26.871785118698572 25.84108602894692 42 22.576413138992052 26.15506800007748 27.716349074695305 23.552169786235158 43 21.802992602140993 25.199210378486512 28.43817302290853 24.559623996463962 44 22.807629251215513 24.976623047298048 27.506616866273266 24.709130835213173 45 22.670977535232723 24.9229132877945 26.81719487133431 25.588914305638465 46 22.702851195790565 26.12266604680321 26.68723486309294 24.48724789431328 47 21.434068188501882 26.514307047248742 28.906064272091882 23.145560492157493 48 21.573713563211104 26.984663662442088 27.96464665141662 23.476976122930193 49 22.981789750064717 25.496815275407798 28.238302278526483 23.283092696001003 50 21.901431144968804 25.901839691336175 28.379884726529276 23.816844437165745 51 21.66299503228749 25.684006994595563 27.462768570809715 25.190229402307228 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 238.0 1 669.5 2 1101.0 3 2096.5 4 3092.0 5 2143.5 6 1195.0 7 1257.5 8 1320.0 9 1273.0 10 1226.0 11 1257.5 12 1289.0 13 1393.5 14 1498.0 15 1399.0 16 1300.0 17 1432.0 18 1564.0 19 1544.0 20 1524.0 21 1633.0 22 1742.0 23 2086.5 24 2431.0 25 3023.0 26 4153.0 27 4691.0 28 5385.0 29 6079.0 30 7638.0 31 9197.0 32 9891.5 33 10586.0 34 12542.0 35 14498.0 36 16066.5 37 17635.0 38 19573.5 39 21512.0 40 22755.0 41 23998.0 42 27449.5 43 30901.0 44 32235.5 45 33570.0 46 36585.5 47 39601.0 48 42668.5 49 45736.0 50 44818.5 51 43901.0 52 41625.5 53 39350.0 54 37289.5 55 35229.0 56 34334.5 57 33440.0 58 32372.5 59 31305.0 60 28977.5 61 26650.0 62 24460.5 63 22271.0 64 19809.5 65 17348.0 66 15164.0 67 12980.0 68 11183.0 69 9386.0 70 7831.5 71 6277.0 72 5237.5 73 4198.0 74 3161.5 75 1599.0 76 1073.0 77 855.5 78 638.0 79 442.0 80 246.0 81 214.5 82 183.0 83 125.0 84 67.0 85 46.0 86 25.0 87 26.5 88 28.0 89 16.5 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 567867.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.55628503610406 #Duplication Level Percentage of deduplicated Percentage of total 1 72.9072001549953 20.09051588655341 2 8.116973436524507 4.473472672947089 3 3.1042802145810335 2.5662729127479973 4 1.7291307988531994 1.9059368463162034 5 1.2362271466868404 1.7032913811736101 6 0.9693938747361793 1.6027736354690107 7 0.827654815878585 1.5964964412498162 8 0.7221259549555675 1.591928691737957 9 0.6294695423599198 1.5611257917734342 >10 9.561825021751263 57.87279835879304 >50 0.16106714330516905 2.740144783665918 >100 0.0320850883078026 1.6360234601495272 >500 0.0019251052984681559 0.37293271481359197 >1k 6.41701766156052E-4 0.28628642260939086 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1619 0.28510196929914927 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 937 0.16500342509777818 No Hit GCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 630 0.11094147044994691 TruSeq Adapter, Index 21 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.521951442855457E-4 0.0 0.0 0.07836341960353392 0.0 2 3.521951442855457E-4 0.0 0.0 0.37473563351982064 0.0 3 3.521951442855457E-4 0.0 0.0 0.5386824731847422 0.0 4 3.521951442855457E-4 0.0 0.0 0.7459493155967859 0.0 5 3.521951442855457E-4 0.0 0.0 1.3034742290008048 0.0 6 3.521951442855457E-4 0.0 0.0 1.7130771818048944 0.0 7 3.521951442855457E-4 0.0 0.0 2.0969698890761395 0.0 8 3.521951442855457E-4 0.0 0.0 2.6559035830573006 0.0 9 3.521951442855457E-4 0.0 0.0 2.9117733553807494 0.0 10 3.521951442855457E-4 0.0 0.0 3.4140036311319375 0.0 11 3.521951442855457E-4 0.0 0.0 4.102897333354465 0.0 12 3.521951442855457E-4 0.0 0.0 4.6473910264199185 0.0 13 3.521951442855457E-4 0.0 0.0 4.8564188445533905 0.0 14 3.521951442855457E-4 0.0 0.0 4.960492509689769 0.0 15 3.521951442855457E-4 0.0 0.0 5.140464228419683 0.0 16 3.521951442855457E-4 0.0 0.0 5.459905224286673 0.0 17 3.521951442855457E-4 0.0 0.0 5.825131588910784 0.0 18 3.521951442855457E-4 0.0 0.0 6.24530039604344 0.0 19 3.521951442855457E-4 0.0 0.0 6.503459436804745 0.0 20 3.521951442855457E-4 0.0 0.0 6.783454576511754 0.0 21 5.282927164283186E-4 0.0 0.0 7.111348255841596 0.0 22 5.282927164283186E-4 0.0 0.0 7.442939984186438 0.0 23 5.282927164283186E-4 0.0 0.0 7.765902931496283 0.0 24 7.043902885710914E-4 0.0 0.0 8.037269290168297 0.0 25 7.043902885710914E-4 0.0 0.0 8.2978936969396 0.0 26 7.043902885710914E-4 0.0 0.0 8.55693322556162 0.0 27 8.804878607138643E-4 0.0 0.0 8.873380562702183 0.0 28 8.804878607138643E-4 0.0 0.0 9.141753262647768 0.0 29 8.804878607138643E-4 0.0 0.0 9.45115669690262 0.0 30 8.804878607138643E-4 0.0 0.0 9.854244039537427 0.0 31 0.0010565854328566371 0.0 0.0 10.152201131602999 0.0 32 0.0010565854328566371 0.0 0.0 10.431667978593579 0.0 33 0.0010565854328566371 0.0 0.0 10.738253851694147 0.0 34 0.0010565854328566371 0.0 0.0 11.078826556218269 0.0 35 0.0010565854328566371 0.0 0.0 11.440002676683097 0.0 36 0.0010565854328566371 0.0 0.0 11.749582208510091 0.0 37 0.0010565854328566371 0.0 0.0 12.09244418147207 0.0 38 0.0010565854328566371 0.0 0.0 12.471934449439745 0.0 39 0.0010565854328566371 0.0 0.0 13.136174491562285 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTACG 25 3.888303E-5 45.000004 26 TAATACG 20 7.0302683E-4 45.0 1 TGCCCGC 20 7.0302683E-4 45.0 41 GTTTACG 20 7.0302683E-4 45.0 1 TTGTACG 20 7.0302683E-4 45.0 1 AGTTACG 20 7.0302683E-4 45.0 1 TATAGCG 20 7.0302683E-4 45.0 1 ACAACGA 120 0.0 41.249996 13 GCTACGA 100 0.0 40.500004 10 GATCTCG 45 1.9254003E-8 40.000004 9 GACCGAT 130 0.0 39.807693 9 ATATGCG 40 3.4540972E-7 39.375 1 TTGAGCG 40 3.4540972E-7 39.375 1 ACACGAC 35 6.242706E-6 38.57143 26 TACGAAT 105 0.0 38.57143 12 CGAATAT 105 0.0 38.57143 14 CGGCTAG 35 6.242706E-6 38.57143 30 AACGAGC 130 0.0 38.076927 15 TACGCTC 30 1.13919465E-4 37.499996 30 CTACGAA 110 0.0 36.81818 11 >>END_MODULE