##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935598.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 513738 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.91754941234637 33.0 31.0 34.0 30.0 34.0 2 31.938240893217944 33.0 31.0 34.0 30.0 34.0 3 31.969854283701032 33.0 31.0 34.0 30.0 34.0 4 35.665652531056686 37.0 35.0 37.0 33.0 37.0 5 35.67543767445663 37.0 35.0 37.0 35.0 37.0 6 35.57743246557584 37.0 35.0 37.0 33.0 37.0 7 35.81527549061973 37.0 35.0 37.0 35.0 37.0 8 35.53503342170523 37.0 35.0 37.0 33.0 37.0 9 37.31245304026566 39.0 37.0 39.0 34.0 39.0 10 37.08324087375277 39.0 37.0 39.0 33.0 39.0 11 37.06403458572268 39.0 37.0 39.0 33.0 39.0 12 36.8854221412471 39.0 35.0 39.0 33.0 39.0 13 36.70965161230043 39.0 35.0 39.0 33.0 39.0 14 37.68433131284819 40.0 36.0 41.0 32.0 41.0 15 37.69417679829018 40.0 36.0 41.0 32.0 41.0 16 37.7071347651916 40.0 36.0 41.0 33.0 41.0 17 37.58386375934815 39.0 36.0 41.0 32.0 41.0 18 37.54402633248854 39.0 36.0 41.0 33.0 41.0 19 37.43905843056188 39.0 36.0 41.0 32.0 41.0 20 37.29642346877202 39.0 35.0 41.0 32.0 41.0 21 37.38251404412366 39.0 35.0 41.0 32.0 41.0 22 37.49559697744765 39.0 35.0 41.0 33.0 41.0 23 37.49236965145658 39.0 35.0 41.0 33.0 41.0 24 37.48625174699944 39.0 35.0 41.0 32.0 41.0 25 37.37125344046966 39.0 35.0 41.0 32.0 41.0 26 37.30830306498643 39.0 35.0 41.0 32.0 41.0 27 37.23794035091817 39.0 35.0 41.0 32.0 41.0 28 37.034071842067355 39.0 35.0 41.0 31.0 41.0 29 37.06444140787717 39.0 35.0 41.0 31.0 41.0 30 36.94096212466277 39.0 35.0 41.0 31.0 41.0 31 36.88011593458144 39.0 35.0 41.0 31.0 41.0 32 36.71250715345176 39.0 35.0 41.0 31.0 41.0 33 36.59476036423235 39.0 35.0 41.0 30.0 41.0 34 36.40233153864421 39.0 35.0 41.0 30.0 41.0 35 36.34408394940612 39.0 35.0 41.0 30.0 41.0 36 36.213009354963035 39.0 35.0 41.0 30.0 41.0 37 36.127284724898686 39.0 35.0 41.0 30.0 41.0 38 35.90958620931292 39.0 35.0 41.0 29.0 41.0 39 35.81655240609027 39.0 35.0 41.0 28.0 41.0 40 35.70088255102796 38.0 35.0 41.0 27.0 41.0 41 35.47000027251245 38.0 35.0 40.0 26.0 41.0 42 35.56977681230511 38.0 35.0 41.0 27.0 41.0 43 35.557587719810485 38.0 35.0 40.0 27.0 41.0 44 35.51841794844843 38.0 35.0 40.0 27.0 41.0 45 35.497161977506046 38.0 35.0 40.0 27.0 41.0 46 35.35928819748588 38.0 34.0 40.0 27.0 41.0 47 35.040071008957874 37.0 34.0 40.0 26.0 41.0 48 34.96117865526786 37.0 34.0 40.0 26.0 41.0 49 34.97854937730906 37.0 34.0 40.0 26.0 41.0 50 34.849518626225816 37.0 34.0 40.0 26.0 41.0 51 33.51871771214121 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 10.0 10 8.0 11 10.0 12 12.0 13 17.0 14 22.0 15 21.0 16 48.0 17 106.0 18 256.0 19 620.0 20 1291.0 21 2157.0 22 3112.0 23 3730.0 24 4415.0 25 5097.0 26 5497.0 27 6013.0 28 6532.0 29 7409.0 30 9181.0 31 12136.0 32 15886.0 33 21630.0 34 36805.0 35 41965.0 36 37979.0 37 55307.0 38 92523.0 39 143856.0 40 80.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 51.838291113369074 16.976552250368865 19.657685434988263 11.527471201273801 2 29.455286546839048 33.577231974274824 20.672015696717004 16.29546578216912 3 28.161241722434394 33.6366007575846 23.464100378013697 14.738057141967307 4 25.699286406689794 21.351544950928293 35.13872830119633 17.810440341185586 5 32.428981309539104 24.740042589802584 23.15927573977397 19.67170036088434 6 22.877030704366817 38.21247406265451 24.69254756315476 14.21794766982392 7 69.83287200868925 5.546601575121949 19.76318668270597 4.857339733482826 8 68.70953676776878 14.210161599881651 11.39763848498651 5.682663147363052 9 63.33636990061082 6.855829235914027 12.492554570617708 17.31524629285745 10 43.54203893813578 21.272321689265734 19.55471466000179 15.630924712596695 11 35.48345654789017 22.063386395399988 23.6630344650386 18.790122591671242 12 27.112458101211125 19.710046755350003 28.674733035126852 24.50276210831202 13 27.861088726160027 21.524590355395162 33.251579598939536 17.36274131950527 14 21.016354639913732 29.695681456306524 28.593368604230175 20.694595299549576 15 18.034679155522852 22.943601602373196 37.16758347640236 21.85413576570158 16 22.099202317134413 24.35521608290607 26.964912075805174 26.580669524154338 17 22.5344436269071 26.481591784138995 29.220925841576832 21.763038747377067 18 23.42536468005092 22.511669372325972 29.307935173181658 24.755030774441448 19 23.043263297634205 25.102289493866525 25.96031440150427 25.894132806995007 20 26.32431317130522 25.622204314261353 29.943473132219147 18.110009382214283 21 22.8663248581962 30.509131113524795 29.007198221661625 17.617345806617383 22 21.815984022984477 21.729947950122437 32.48659822711188 23.96746979978121 23 23.21455683636406 27.544974286504015 29.01926663007214 20.221202247059786 24 23.241613429413434 25.615002199564756 26.457844270815084 24.685540100206723 25 21.472034383284864 31.798504295964094 25.077179418302713 21.65228190244833 26 20.672599651962674 23.14058917191253 29.58628717361768 26.600524002507115 27 25.438842367120984 25.38122544954821 25.944352958122625 23.23557922520818 28 18.275658020235998 27.34740276171901 29.85023494466051 24.526704273384485 29 22.905644511404645 23.688339192350966 27.932915221377435 25.473101074866953 30 24.215066823945282 26.53200658701517 28.514729297813286 20.738197291226268 31 25.479719234317884 25.117277678505385 24.723107887678157 24.679895199498578 32 28.220999809241288 25.23348477239371 27.37173423028859 19.173781188076415 33 25.85578641252934 22.985451728312874 26.954400881383116 24.204360977774662 34 25.862404571980267 22.948857199584225 28.25447990999303 22.934258318442474 35 27.556069436171743 24.470255266303056 26.168397120711333 21.80527817681386 36 23.03761839692606 31.1980036516668 23.73057862178776 22.033799329619377 37 24.669578656825074 25.937540146923137 29.203407184206736 20.18947401204505 38 21.82182357544118 28.554048951021727 26.380762178386647 23.243365295150447 39 25.532275206428178 23.918612210893492 28.364652799676097 22.184459783002232 40 26.201098614468854 21.511548688241867 29.798846883041552 22.48850581424773 41 23.44288333742102 26.708361071207502 24.38207802420689 25.466677567164588 42 24.385192452183798 23.345168159645578 29.52088418610264 22.74875520206798 43 22.926666900248765 25.71174411859742 26.06445308698208 25.297135894171735 44 23.919780121384832 22.209375206817484 29.057029069292128 24.813815602505557 45 22.256286278219637 21.65578563392235 27.430908361849816 28.657019726008198 46 26.10318878494485 25.42268627199078 25.585999089029816 22.88812585403455 47 19.360257563193688 24.761454282143816 33.98385947700968 21.89442867765281 48 22.948078592589997 25.915739151084793 26.82982376230686 24.30635849401835 49 23.50458794171348 21.350960995682623 32.476670987935485 22.66778007466841 50 22.09258415768349 23.505366548707705 29.674659067462407 24.7273902261464 51 22.177063016557078 22.355947973480646 26.6922049760773 28.774784033884977 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 161.0 1 516.5 2 872.0 3 2063.0 4 3254.0 5 2169.5 6 1085.0 7 1063.5 8 1042.0 9 1084.5 10 1127.0 11 1090.0 12 1053.0 13 1085.0 14 1117.0 15 1068.5 16 1020.0 17 1060.5 18 1101.0 19 1149.0 20 1197.0 21 1424.0 22 1651.0 23 1953.5 24 2256.0 25 2307.0 26 3091.5 27 3825.0 28 4380.0 29 4935.0 30 5944.0 31 6953.0 32 7947.5 33 8942.0 34 10159.0 35 11376.0 36 11989.5 37 12603.0 38 14075.5 39 15548.0 40 16713.5 41 17879.0 42 20203.0 43 22527.0 44 24843.0 45 27159.0 46 52966.0 47 78773.0 48 61462.5 49 44152.0 50 44340.0 51 44528.0 52 39744.5 53 34961.0 54 33027.5 55 31094.0 56 29722.5 57 28351.0 58 27019.5 59 25688.0 60 23335.0 61 20982.0 62 19028.5 63 17075.0 64 14698.0 65 12321.0 66 10731.5 67 9142.0 68 7557.5 69 5973.0 70 5058.0 71 4143.0 72 3335.5 73 2528.0 74 2028.5 75 1118.0 76 707.0 77 540.0 78 373.0 79 265.5 80 158.0 81 148.0 82 138.0 83 94.5 84 51.0 85 33.0 86 15.0 87 9.5 88 4.0 89 4.5 90 5.0 91 3.5 92 2.0 93 2.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 513738.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.60492993321921 #Duplication Level Percentage of deduplicated Percentage of total 1 74.10139786716474 23.419694875453413 2 8.62697989854841 5.453101904578261 3 3.270856804593443 3.101256003923071 4 1.8593697736232075 2.3506100566122856 5 1.3158521404001458 2.0793707349911568 6 1.0583494530038065 2.006943618422771 7 0.943316608371785 2.0869418718702577 8 0.7923060204306642 2.0032621009103115 9 0.7292573849104707 2.074331569804029 >10 7.187426914300674 41.46231679984714 >50 0.06979702266533644 1.455523377093857 >100 0.03520734771614316 1.8742596490716363 >500 0.0030883638347494 0.6340584668456073 >1k 0.00494138213559904 3.3686308201624993 >5k 0.0 0.0 >10k+ 0.0018530183008496398 6.629698150413691 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTC 11649 2.2674982189365007 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGC 11328 2.205015007649814 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCG 10984 2.138054806146324 No Hit GCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC 3066 0.5968022610747112 No Hit GAACTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCT 2512 0.4889651923743231 No Hit GAATGCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTT 2320 0.45159205665144486 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCT 2175 0.4233675531107296 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGATTGGAT 2032 0.39553235306712764 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1799 0.35017849565342646 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTC 1748 0.3402512564770369 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGATTGGATCGTA 1604 0.3122214046848783 No Hit CCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC 846 0.16467537927893205 No Hit CTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGCT 731 0.14229042819491647 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCC 583 0.1134819694085312 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 557 0.10842102394605811 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATG 531 0.10336007848358501 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.839552456699718E-4 0.0 0.0 0.1535802296112026 0.0 2 5.839552456699718E-4 0.0 0.0 1.0857674534490342 0.0 3 5.839552456699718E-4 0.0 0.0 1.3717108720787639 0.0 4 5.839552456699718E-4 0.0 0.0 2.1754279418692017 0.0 5 5.839552456699718E-4 0.0 0.0 5.347083532851376 0.0 6 5.839552456699718E-4 0.0 0.0 6.37348220299063 0.0 7 5.839552456699718E-4 0.0 0.0 7.287761465961249 0.0 8 5.839552456699718E-4 0.0 0.0 8.304232896924113 0.0 9 5.839552456699718E-4 0.0 0.0 8.590760270799512 0.0 10 5.839552456699718E-4 0.0 0.0 11.34702903036178 0.0 11 5.839552456699718E-4 0.0 0.0 12.221793988375397 0.0 12 5.839552456699718E-4 0.0 0.0 15.152860018141544 0.0 13 5.839552456699718E-4 0.0 0.0 15.581483168463302 0.0 14 5.839552456699718E-4 0.0 0.0 15.825381809404794 0.0 15 5.839552456699718E-4 0.0 0.0 16.405833323600746 0.0 16 5.839552456699718E-4 0.0 0.0 16.89110013275249 0.0 17 5.839552456699718E-4 0.0 0.0 17.400893062222377 0.0 18 5.839552456699718E-4 0.0 0.0 17.92139183786288 0.0 19 5.839552456699718E-4 0.0 0.0 18.73367358458981 0.0 20 5.839552456699718E-4 0.0 0.0 19.161518127917343 0.0 21 5.839552456699718E-4 0.0 0.0 19.59500757195302 0.0 22 5.839552456699718E-4 0.0 0.0 20.15988694626444 0.0 23 5.839552456699718E-4 0.0 0.0 20.549579746874866 0.0 24 7.786069942266291E-4 0.0 0.0 20.915525034161384 0.0 25 9.732587427832864E-4 0.0 0.0 21.24584905146203 0.0 26 9.732587427832864E-4 0.0 0.0 21.632232772346995 0.0 27 9.732587427832864E-4 0.0 0.0 22.111076073796372 0.0 28 9.732587427832864E-4 0.0 0.0 22.432251458914855 0.0 29 9.732587427832864E-4 0.0 0.0 22.77367062588323 0.0 30 9.732587427832864E-4 0.0 0.0 23.204240293690557 0.0 31 0.0011679104913399436 0.0 0.0 23.56181555578914 0.0 32 0.0011679104913399436 0.0 0.0 23.90946357871133 0.0 33 0.001362562239896601 0.0 0.0 24.259447422616198 0.0 34 0.001362562239896601 0.0 0.0 24.611183132258077 0.0 35 0.001362562239896601 0.0 0.0 24.960583020917277 0.0 36 0.001362562239896601 0.0 0.0 25.30219683963421 0.0 37 0.001362562239896601 0.0 0.0 25.64809299681939 0.0 38 0.001362562239896601 0.0 0.0 26.029999727487553 0.0 39 0.001362562239896601 0.0 0.0 26.622519650094016 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTCA 20 7.0296385E-4 45.000004 25 GCGTTAG 20 7.0296385E-4 45.000004 1 TTATACG 20 7.0296385E-4 45.000004 26 GTGTCGT 20 7.0296385E-4 45.000004 1 CGATCGA 85 0.0 45.000004 41 TAAGACG 20 7.0296385E-4 45.000004 1 ACTCAAC 35 1.2101737E-7 45.0 45 CGGGTAT 65 0.0 44.999996 6 CCGATGA 1040 0.0 42.403843 18 CGATGAA 1085 0.0 41.8894 19 CCGATTA 60 3.6379788E-12 41.249996 18 AGTACGG 60 3.6379788E-12 41.249996 2 TACGGCT 1355 0.0 41.180813 7 ACGGCTG 1360 0.0 41.029415 8 ACGTTGG 50 1.0786607E-9 40.5 2 TACGGAA 50 1.0786607E-9 40.5 5 GTTCCGA 50 1.0786607E-9 40.5 15 CCGATCG 90 0.0 40.0 40 CGTTAGG 45 1.9246727E-8 40.0 2 AGGGCGC 45 1.9246727E-8 40.0 6 >>END_MODULE