##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935591.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 664234 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.103480098880816 33.0 31.0 34.0 30.0 34.0 2 32.09225062252158 33.0 31.0 34.0 30.0 34.0 3 32.0905509203082 33.0 31.0 34.0 30.0 34.0 4 35.75066618089408 37.0 35.0 37.0 33.0 37.0 5 35.82976481179825 37.0 35.0 37.0 35.0 37.0 6 35.7829560064676 37.0 35.0 37.0 35.0 37.0 7 36.022281304480046 37.0 35.0 37.0 35.0 37.0 8 35.86259661504831 37.0 35.0 37.0 35.0 37.0 9 37.644495765046656 39.0 38.0 39.0 35.0 39.0 10 37.291359671441086 39.0 37.0 39.0 34.0 39.0 11 37.318490170632636 39.0 37.0 39.0 34.0 39.0 12 37.19320600872584 39.0 37.0 39.0 34.0 39.0 13 37.13354028851278 39.0 37.0 39.0 33.0 39.0 14 38.14198159082492 40.0 37.0 41.0 33.0 41.0 15 38.31224237241695 40.0 38.0 41.0 33.0 41.0 16 38.12245835052105 40.0 37.0 41.0 33.0 41.0 17 38.20096532246166 40.0 37.0 41.0 34.0 41.0 18 38.10803120587022 40.0 37.0 41.0 34.0 41.0 19 38.02322073245272 40.0 37.0 41.0 34.0 41.0 20 38.1764031952595 40.0 37.0 41.0 34.0 41.0 21 38.067608704161486 40.0 37.0 41.0 34.0 41.0 22 38.17593498676671 40.0 37.0 41.0 34.0 41.0 23 38.233944664079225 40.0 37.0 41.0 34.0 41.0 24 38.17617285474697 40.0 37.0 41.0 34.0 41.0 25 37.88300056907656 40.0 36.0 41.0 33.0 41.0 26 38.012477530508825 40.0 36.0 41.0 34.0 41.0 27 37.99787123212603 40.0 36.0 41.0 34.0 41.0 28 37.76547421541204 40.0 36.0 41.0 33.0 41.0 29 37.62722022660689 40.0 36.0 41.0 33.0 41.0 30 37.46224372736114 40.0 36.0 41.0 33.0 41.0 31 37.457332807414254 40.0 36.0 41.0 33.0 41.0 32 37.48345010944938 40.0 35.0 41.0 33.0 41.0 33 37.42491802587642 40.0 35.0 41.0 33.0 41.0 34 37.30117097288004 40.0 35.0 41.0 32.0 41.0 35 37.23294200537762 40.0 35.0 41.0 32.0 41.0 36 37.12012182453774 40.0 35.0 41.0 32.0 41.0 37 37.085307286287666 40.0 35.0 41.0 32.0 41.0 38 36.91872743641548 39.0 35.0 41.0 31.0 41.0 39 36.83949782757281 39.0 35.0 41.0 31.0 41.0 40 36.746870831664744 39.0 35.0 41.0 31.0 41.0 41 36.58023527853136 39.0 35.0 41.0 31.0 41.0 42 36.593438456929334 39.0 35.0 41.0 31.0 41.0 43 36.48999750088071 39.0 35.0 41.0 30.0 41.0 44 36.403281072634044 39.0 35.0 41.0 30.0 41.0 45 36.378798736589815 39.0 35.0 41.0 30.0 41.0 46 36.21424528103048 39.0 35.0 41.0 30.0 41.0 47 36.19666864388152 38.0 35.0 41.0 30.0 41.0 48 36.11352475181939 38.0 35.0 41.0 30.0 41.0 49 35.9711411942177 38.0 35.0 40.0 30.0 41.0 50 35.81656765537446 38.0 35.0 40.0 29.0 41.0 51 34.64103312989097 37.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 5.0 9 14.0 10 21.0 11 15.0 12 14.0 13 14.0 14 22.0 15 24.0 16 71.0 17 101.0 18 180.0 19 319.0 20 569.0 21 985.0 22 1460.0 23 2167.0 24 2969.0 25 4141.0 26 5393.0 27 6498.0 28 7133.0 29 8360.0 30 10116.0 31 12461.0 32 16044.0 33 22479.0 34 42115.0 35 50615.0 36 47493.0 37 71384.0 38 128400.0 39 222504.0 40 145.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.46505297831788 19.882300514577693 22.886663434873856 12.765983072230568 2 32.897292219308255 23.28878076099688 24.821523740127727 18.992403279567142 3 32.75396923373389 23.808326583703934 26.27297006777732 17.16473411478485 4 28.42462144364787 25.11584772836079 26.121216318345642 20.3383145096457 5 24.589527184696962 28.871000280021796 25.31562672190824 21.223845813373 6 25.067973033599607 33.97070911757002 25.988431787592926 14.972886061237457 7 79.28591430128539 6.257734473092313 9.420475314422328 5.035875911199969 8 79.59137894175848 5.576197544841125 9.282722654967978 5.54970085843242 9 73.18023467633394 8.113255268474665 11.819328730537732 6.887181324653661 10 39.756621913361855 26.788149959201125 18.2413125494931 15.213915577943919 11 29.55313940569137 27.077806917441745 24.687384265183653 18.68166941168323 12 27.22037715624313 22.809130517257472 31.086484582240598 18.884007744258803 13 26.28185247969842 24.002836349840567 30.842293529087637 18.873017641373373 14 20.481938593929247 27.45387920521985 31.721802858631143 20.34237934221976 15 18.96154066187518 25.329778361240162 35.51233450862196 20.19634646826269 16 23.421264193040404 26.161412996022488 29.868690852922313 20.548631958014795 17 23.952853964115057 23.856351827819715 27.596148345312045 24.594645862753186 18 26.29630521773953 23.11956328643219 29.941105092482466 20.64302640334581 19 25.194434491459333 25.39722447209869 27.091055260646097 22.317285775795877 20 24.907487421601424 26.243161295567525 27.166932135361936 21.682419147469115 21 24.837030323651003 26.75156646603456 29.287419794831337 19.1239834154831 22 22.741383307689762 24.859462177485643 28.991891411761518 23.407263103063077 23 21.634695002062525 25.182992740510123 28.990837566279353 24.191474691148 24 21.860067385891117 24.893034683560312 29.18865941821707 24.0582385123315 25 22.576531764408326 26.638804999442968 26.633987420095927 24.15067581605278 26 20.833019688844594 25.61687598045267 27.973123929217714 25.576980401485017 27 21.372287477003585 24.76326113989949 29.022302381389693 24.84214900170723 28 20.523791314506635 25.990388929202663 29.291635176759996 24.19418457953071 29 21.0135283650039 25.48996287452916 30.117699485422307 23.378809275044638 30 23.474257565857815 25.08498511066883 28.364100603100717 23.07665672037264 31 22.678152578759896 28.614012531728278 26.15117563991003 22.556659249601797 32 22.389398916646844 27.884902007425094 26.089902052589903 23.635797023338164 33 22.63599875947332 24.965147824411275 27.244766151687504 25.1540872644279 34 20.757142814128756 26.8333147655796 28.539942249267575 23.869600171024068 35 20.011622410174727 28.105155713197455 27.58380329823526 24.299418578392554 36 21.893639891965783 27.75407461828211 26.559164390862257 23.79312109888985 37 20.723118659990305 29.341165914421723 26.093816335809368 23.8418990897786 38 21.057488776545615 28.30930063802817 25.109073007404014 25.524137578022206 39 22.02702662013688 25.329928910594763 25.845259351373162 26.797785117895202 40 23.4658268020005 25.08031808067639 27.68090763194898 23.77294748537413 41 19.79287419794831 25.863626372633743 26.815098293673618 27.52840113574433 42 21.129601917396577 25.83110771204124 27.930217363158167 25.109073007404014 43 21.171304088619372 24.978095068906438 28.017535988823216 25.83306485365097 44 21.325617177079163 24.827997362375307 27.038513535892474 26.80787192465306 45 20.834976830454327 24.30604274999473 26.78649391630058 28.07248650325036 46 21.28060292005528 25.71307701803882 27.25440131038158 25.75191875152431 47 19.11269221388848 26.22223493527883 28.750861895055056 25.914210955777634 48 19.635249023687436 26.07063173520175 27.863523999072616 26.430595242038198 49 22.388194521810085 24.248382347184876 28.72993553476636 24.633487596238677 50 19.98346968086548 24.639961218486256 29.39792302110401 25.97864607954426 51 20.583408858926223 24.434762448173387 27.44213635556144 27.53969233733895 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 314.0 1 775.5 2 1237.0 3 2107.0 4 2977.0 5 2047.5 6 1118.0 7 1124.0 8 1130.0 9 1150.5 10 1171.0 11 1215.5 12 1260.0 13 1315.0 14 1370.0 15 1374.0 16 1378.0 17 1326.5 18 1275.0 19 1488.0 20 1701.0 21 1761.0 22 1821.0 23 2106.5 24 2392.0 25 3051.5 26 4733.5 27 5756.0 28 6486.5 29 7217.0 30 8594.5 31 9972.0 32 11788.5 33 13605.0 34 15323.0 35 17041.0 36 18331.5 37 19622.0 38 22053.5 39 24485.0 40 26418.0 41 28351.0 42 31760.0 43 35169.0 44 38971.0 45 42773.0 46 48864.5 47 54956.0 48 60541.0 49 66126.0 50 65353.5 51 64581.0 52 56800.0 53 49019.0 54 44094.5 55 39170.0 56 37457.0 57 35744.0 58 33845.5 59 31947.0 60 29287.5 61 26628.0 62 24230.5 63 21833.0 64 18721.0 65 15609.0 66 13261.5 67 10914.0 68 9592.5 69 8271.0 70 6650.5 71 5030.0 72 4317.0 73 3604.0 74 2791.0 75 1421.0 76 864.0 77 705.0 78 546.0 79 428.5 80 311.0 81 239.5 82 168.0 83 112.5 84 57.0 85 40.0 86 23.0 87 14.0 88 5.0 89 4.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 664234.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.625379188569276 #Duplication Level Percentage of deduplicated Percentage of total 1 74.49172235624988 24.303206882822757 2 9.596994560196002 6.2621117319406245 3 3.5356870183758784 3.4605938899984476 4 1.7537485312680405 2.2886684333606504 5 1.1048664430734343 1.8023343328998291 6 0.8289677531872705 1.6227232369698605 7 0.6242732400857243 1.4257005822551454 8 0.5351971660820939 1.3968808387260803 9 0.46035150425198357 1.35172281476243 >10 6.882611527494268 49.404993880453205 >50 0.13837503746043103 2.812904488112809 >100 0.043502520135802296 2.516364261773611 >500 0.0018511710696086084 0.40842225657612014 >1k 0.0018511710696086084 0.9433723693484654 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 1872 0.28182839180168434 RNA PCR Primer, Index 14 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1608 0.24208336218862628 No Hit CCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 1552 0.23365259833131097 RNA PCR Primer, Index 16 (95% over 23bp) CTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGCT 1216 0.1830680151874189 RNA PCR Primer, Index 16 (95% over 24bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCC 737 0.11095487433645372 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 716 0.10779333788996047 No Hit TCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 700 0.1053845482164418 RNA PCR Primer, Index 14 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5054935459491686E-4 0.0 0.0 0.19315482194527833 0.0 2 1.5054935459491686E-4 0.0 0.0 0.9221147968938657 0.0 3 1.5054935459491686E-4 0.0 0.0 1.3151991617411936 0.0 4 1.5054935459491686E-4 0.0 0.0 1.7788911738935376 0.0 5 1.5054935459491686E-4 0.0 0.0 2.9972871006301998 0.0 6 1.5054935459491686E-4 0.0 0.0 3.837352499269836 0.0 7 1.5054935459491686E-4 0.0 0.0 4.545988311348109 0.0 8 1.5054935459491686E-4 0.0 0.0 5.616845870581753 0.0 9 1.5054935459491686E-4 0.0 0.0 6.049825814396733 0.0 10 1.5054935459491686E-4 0.0 0.0 6.987748293523065 0.0 11 1.5054935459491686E-4 0.0 0.0 8.272385936281491 0.0 12 1.5054935459491686E-4 0.0 0.0 9.30635890363938 0.0 13 1.5054935459491686E-4 0.0 0.0 9.854358554364877 0.0 14 1.5054935459491686E-4 0.0 0.0 10.135283650038993 0.0 15 1.5054935459491686E-4 0.0 0.0 10.493892212684084 0.0 16 3.010987091898337E-4 0.0 0.0 11.121532471990292 0.0 17 3.010987091898337E-4 0.0 0.0 11.864493536916207 0.0 18 3.010987091898337E-4 0.0 0.0 12.743852317105116 0.0 19 3.010987091898337E-4 0.0 0.0 13.228771788255344 0.0 20 3.010987091898337E-4 0.0 0.0 13.757049473528907 0.0 21 3.010987091898337E-4 0.0 0.0 14.344944703222057 0.0 22 3.010987091898337E-4 0.0 0.0 14.940367400644954 0.0 23 3.010987091898337E-4 0.0 0.0 15.510196707786713 0.0 24 3.010987091898337E-4 0.0 0.0 15.998879912801813 0.0 25 3.010987091898337E-4 0.0 0.0 16.44330160756601 0.0 26 3.010987091898337E-4 0.0 0.0 16.86288265882204 0.0 27 3.010987091898337E-4 0.0 0.0 17.352619709319306 0.0 28 3.010987091898337E-4 0.0 0.0 17.7792765802413 0.0 29 3.010987091898337E-4 0.0 0.0 18.235742223373087 0.0 30 3.010987091898337E-4 0.0 0.0 18.790968243119142 0.0 31 3.010987091898337E-4 0.0 0.0 19.242164658840107 0.0 32 3.010987091898337E-4 0.0 0.0 19.68131712619348 0.0 33 3.010987091898337E-4 0.0 0.0 20.168645387017225 0.0 34 6.021974183796675E-4 0.0 0.0 20.70700987904865 0.0 35 6.021974183796675E-4 0.0 0.0 21.2267062511103 0.0 36 6.021974183796675E-4 0.0 0.0 21.649749937522017 0.0 37 6.021974183796675E-4 0.0 0.0 22.109678215809488 0.0 38 6.021974183796675E-4 0.0 0.0 22.590833953094844 0.0 39 6.021974183796675E-4 0.0 0.0 23.305190640647723 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGTA 25 3.8890204E-5 45.000004 12 TTACGCG 25 3.8890204E-5 45.000004 1 ACCGGTA 20 7.031133E-4 45.0 41 CGTTAGA 20 7.031133E-4 45.0 9 GCGATAT 45 3.8380676E-10 45.0 9 ATGCGGC 20 7.031133E-4 45.0 42 TATCGCC 20 7.031133E-4 45.0 17 ATCGCAC 20 7.031133E-4 45.0 33 CTTACGT 20 7.031133E-4 45.0 22 GCGTAAG 80 0.0 42.1875 1 CACGGGT 65 0.0 41.53846 4 CGTAAGG 115 0.0 41.08696 2 ACGGGTC 50 1.0804797E-9 40.500004 5 ATTAACG 35 6.244307E-6 38.57143 1 TTCGAAG 35 6.244307E-6 38.57143 1 AAATGCG 35 6.244307E-6 38.57143 1 CGAATGG 100 0.0 38.250004 2 CGTTTTT 855 0.0 38.157894 1 CGGGCAC 65 9.094947E-12 38.07692 6 GCTACGA 95 0.0 37.894737 10 >>END_MODULE