##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935588.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 756835 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17410532018207 33.0 31.0 34.0 30.0 34.0 2 32.19428541227612 33.0 31.0 34.0 30.0 34.0 3 32.20955426215754 34.0 31.0 34.0 30.0 34.0 4 35.85056848586548 37.0 35.0 37.0 35.0 37.0 5 35.9164599945827 37.0 35.0 37.0 35.0 37.0 6 35.84934629080315 37.0 35.0 37.0 35.0 37.0 7 36.08591436706812 37.0 35.0 37.0 35.0 37.0 8 35.88103087198663 37.0 35.0 37.0 35.0 37.0 9 37.68490754259515 39.0 38.0 39.0 35.0 39.0 10 37.41556481928029 39.0 37.0 39.0 34.0 39.0 11 37.37439071924528 39.0 37.0 39.0 35.0 39.0 12 37.22009024424082 39.0 37.0 39.0 34.0 39.0 13 37.15446695779133 39.0 37.0 39.0 34.0 39.0 14 38.30708542813163 40.0 37.0 41.0 34.0 41.0 15 38.377744158237924 40.0 37.0 41.0 34.0 41.0 16 38.21230783460067 40.0 37.0 41.0 34.0 41.0 17 38.1856230221911 40.0 37.0 41.0 34.0 41.0 18 38.11739811187379 40.0 37.0 41.0 34.0 41.0 19 38.000383174668194 40.0 37.0 41.0 34.0 41.0 20 38.106597871398655 40.0 36.0 41.0 34.0 41.0 21 38.069311012307836 40.0 36.0 41.0 34.0 41.0 22 38.15842554850133 40.0 37.0 41.0 34.0 41.0 23 38.18319316627799 40.0 37.0 41.0 34.0 41.0 24 38.117190669036184 40.0 36.0 41.0 34.0 41.0 25 37.88639135346542 40.0 36.0 41.0 34.0 41.0 26 37.94573453923246 40.0 36.0 41.0 34.0 41.0 27 37.953912015168434 40.0 36.0 41.0 34.0 41.0 28 37.850084893008386 40.0 36.0 41.0 34.0 41.0 29 37.802859275799875 40.0 36.0 41.0 34.0 41.0 30 37.645640066857375 40.0 36.0 41.0 33.0 41.0 31 37.655609214690124 40.0 36.0 41.0 33.0 41.0 32 37.5704770524619 40.0 35.0 41.0 33.0 41.0 33 37.47972015036302 40.0 35.0 41.0 33.0 41.0 34 37.39401454742447 40.0 35.0 41.0 33.0 41.0 35 37.28530657276685 40.0 35.0 41.0 33.0 41.0 36 37.18732220365073 40.0 35.0 41.0 32.0 41.0 37 37.20115216658849 40.0 35.0 41.0 33.0 41.0 38 37.03140314599616 40.0 35.0 41.0 32.0 41.0 39 36.9952076740637 39.0 35.0 41.0 32.0 41.0 40 36.83364802103497 39.0 35.0 41.0 31.0 41.0 41 36.709835036698884 39.0 35.0 41.0 31.0 41.0 42 36.73130206716127 39.0 35.0 41.0 31.0 41.0 43 36.6858760496013 39.0 35.0 41.0 31.0 41.0 44 36.61213606664597 39.0 35.0 41.0 31.0 41.0 45 36.597276817271926 39.0 35.0 41.0 31.0 41.0 46 36.46083624568103 39.0 35.0 41.0 31.0 41.0 47 36.37573843704374 39.0 35.0 41.0 31.0 41.0 48 36.261926311547434 38.0 35.0 41.0 31.0 41.0 49 36.20463905606903 38.0 35.0 41.0 30.0 41.0 50 36.095163410783066 38.0 35.0 40.0 30.0 41.0 51 34.91055381952473 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 9.0 9 25.0 10 26.0 11 22.0 12 21.0 13 24.0 14 38.0 15 33.0 16 46.0 17 95.0 18 200.0 19 341.0 20 660.0 21 1191.0 22 1756.0 23 2457.0 24 3266.0 25 4379.0 26 5564.0 27 6607.0 28 7437.0 29 8425.0 30 10349.0 31 12894.0 32 17004.0 33 24044.0 34 49204.0 35 65034.0 36 50922.0 37 76326.0 38 141499.0 39 266751.0 40 183.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.488514669643976 19.168510970026492 23.291074012169098 12.051900348160432 2 31.011382930229175 27.144622011402745 24.476008641249415 17.367986417118658 3 31.901537323194617 26.443015981026246 25.40910502289138 16.24634167288775 4 28.65869046753916 24.467552372710035 28.238916012076608 18.634841147674198 5 28.12832387508506 28.501324595189175 23.644387482079978 19.72596404764579 6 25.09992270442038 35.81176874748129 24.230380466019675 14.857928082078656 7 76.60863992812172 6.505116703112303 11.965355724827736 4.920887643938243 8 77.18234489684012 8.707181882444655 9.044771978040128 5.065701242675088 9 70.64128905243547 8.615087832882994 11.29374302192684 9.449880092754695 10 42.838531516116454 25.128066223153 17.86267812667226 14.170724134058283 11 33.943329787866574 24.876227975714656 23.32899509140037 17.851447145018398 12 30.67167876749886 21.73644189288286 27.156117251448464 20.435762088169813 13 26.82579426162902 22.840513454055376 29.168312776232604 21.165379508083003 14 21.126269266088382 27.809628254507256 28.375405471470007 22.68869700793436 15 20.300593920735697 25.198094696994723 33.97239821097069 20.528913171298896 16 23.291998916540592 24.163919480468003 30.532810982578766 22.011270620412642 17 22.91159896146452 25.21500723407348 28.947657019033212 22.925736785428793 18 24.00298611982797 25.57426651780111 28.25556429076351 22.16718307160742 19 25.041521599820303 27.78267389853799 25.917670298017402 21.258134203624305 20 27.85468431031863 25.280675444449585 27.730614995342446 19.13402524988934 21 25.777877608725813 28.267323789201082 26.574220272582533 19.380578329490575 22 23.092615959885578 25.3873037055633 27.935679507422357 23.584400827128764 23 24.685829804382724 26.84191402353221 27.321410875554115 21.15084529653095 24 24.659800352784952 23.542515872019663 28.576373978476155 23.221309796719233 25 22.93009704889441 26.787608924005895 26.51634768476616 23.76594634233353 26 21.60616250569807 25.89098020043999 28.932462161501515 23.57039513236042 27 23.704638395423043 26.198709097755785 27.383379468444247 22.713273038376926 28 20.48649969940608 27.625175896992076 29.422529349197646 22.465795054404197 29 24.018577364947447 25.699260737148784 28.386107936340153 21.896053961563616 30 24.12480923847338 25.516790317572525 28.830722680637127 21.527677763316973 31 25.37712975747686 25.36893774732934 25.498027971750776 23.75590452344302 32 26.82116973977155 26.308112071983984 26.686397959925213 20.18432022831925 33 25.226238215727335 25.342247649751926 27.361446021920234 22.0700681126005 34 23.958194322408453 25.296134560373133 29.40667384568631 21.338997271532104 35 24.068918588595928 24.961319177892143 28.55998995818111 22.40977227533082 36 22.53806972457669 27.78756267878732 28.261377975384335 21.41298962125166 37 25.59910680663553 27.27833675768166 27.206194216705093 19.916362218977714 38 22.60955161957362 26.9460318299233 26.744534806133437 23.699881744369645 39 25.963783387396195 24.7546691154611 27.23275218508658 22.04879531205613 40 23.681912173723465 23.740973924303184 30.6580694603183 21.91904444165505 41 21.412725362859806 25.9319402511776 29.256575079112356 23.398759306850238 42 21.769077804277025 24.87754926767393 29.481326841385506 23.87204608666354 43 22.651172316290868 24.512872686913266 29.026273890610238 23.80968110618563 44 23.382903803338905 24.661518032332015 27.411126599589082 24.54445156474 45 22.997615068013506 24.144100101078834 27.372280615986313 25.486004214921348 46 23.427959859150278 26.617162261259057 27.080142963789992 22.87473491580067 47 21.881123362423775 25.210118453824148 31.18803966518462 21.720718518567455 48 22.427081199997357 23.66143214835466 29.9151069916164 23.99637966003158 49 21.66205315557552 24.21756393401468 30.673792834633705 23.446590075776093 50 21.091915675147156 23.809152589401915 30.138669591126206 24.960262144324723 51 20.634484398845192 23.718247702603605 29.007247286396638 26.640020612154565 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 249.0 1 859.0 2 1469.0 3 2710.0 4 3951.0 5 2737.0 6 1523.0 7 1467.5 8 1412.0 9 1457.0 10 1502.0 11 1556.0 12 1610.0 13 1538.0 14 1466.0 15 1624.5 16 1783.0 17 1816.0 18 1849.0 19 2001.0 20 2153.0 21 2257.5 22 2362.0 23 2759.5 24 3157.0 25 3926.0 26 6030.0 27 7365.0 28 8693.5 29 10022.0 30 11607.5 31 13193.0 32 14850.5 33 16508.0 34 18241.5 35 19975.0 36 21659.0 37 23343.0 38 24560.5 39 25778.0 40 29118.5 41 32459.0 42 35600.0 43 38741.0 44 42868.5 45 46996.0 46 59877.5 47 72759.0 48 67447.0 49 62135.0 50 60333.5 51 58532.0 52 52972.5 53 47413.0 54 45006.0 55 42599.0 56 41378.5 57 40158.0 58 39560.5 59 38963.0 60 39223.0 61 39483.0 62 36167.0 63 32851.0 64 27414.5 65 21978.0 66 17865.0 67 13752.0 68 10982.5 69 8213.0 70 7077.5 71 5942.0 72 4821.0 73 3700.0 74 2906.0 75 1816.0 76 1520.0 77 1060.5 78 601.0 79 450.0 80 299.0 81 211.5 82 124.0 83 101.5 84 79.0 85 57.5 86 36.0 87 24.5 88 13.0 89 9.5 90 6.0 91 5.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 756835.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.995741576095337 #Duplication Level Percentage of deduplicated Percentage of total 1 73.28775605242491 19.051695670307552 2 9.3634723741481 4.868208161865238 3 3.203660981032043 2.4984462888098724 4 1.6458284052680856 1.7113811960778504 5 0.990615444036312 1.287589154222845 6 0.7701088958613718 1.2011731105358603 7 0.6698779045766233 1.2189781026437108 8 0.5671044737212981 1.1793841076405132 9 0.4932403047819364 1.153993274822315 >10 8.539886545570965 52.82058178265474 >50 0.3999201088738119 6.313775841514427 >100 0.05983459429431774 2.8689312444134267 >500 0.005114067888403226 0.9985422880810587 >1k 0.002557033944201613 1.4199747275986936 >5k 0.0010228135776806453 1.4073450488118877 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGC 5303 0.7006811260050076 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCG 5283 0.6980385420864521 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTC 4138 0.5467506127491462 No Hit GCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 2186 0.28883442229812306 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1941 0.25646276929581746 No Hit CCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 1414 0.18683068304187836 TruSeq Adapter, Index 14 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCGTGTTT 1002 0.13239345431963373 No Hit CTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGCT 916 0.1210303434698448 TruSeq Adapter, Index 21 (95% over 22bp) GCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCAAGATACTTAACT 866 0.11442388367345592 No Hit GAACTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCT 794 0.10491058156665589 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCT 780 0.10306077282366698 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTT 780 0.10306077282366698 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.642583918555564E-4 0.0 0.0 0.13186493753592263 0.0 2 2.642583918555564E-4 0.0 0.0 0.7681991451241024 0.0 3 2.642583918555564E-4 0.0 0.0 1.0373463172289865 0.0 4 2.642583918555564E-4 0.0 0.0 1.4207852438113988 0.0 5 2.642583918555564E-4 0.0 0.0 2.730053446259753 0.0 6 2.642583918555564E-4 0.0 0.0 3.3651984910845827 0.0 7 2.642583918555564E-4 0.0 0.0 3.9288616409124844 0.0 8 2.642583918555564E-4 0.0 0.0 4.674995210316648 0.0 9 2.642583918555564E-4 0.0 0.0 4.9376680518210705 0.0 10 2.642583918555564E-4 0.0 0.0 6.200426777302846 0.0 11 2.642583918555564E-4 0.0 0.0 7.003904417739665 0.0 12 2.642583918555564E-4 0.0 0.0 8.360078484742381 0.0 13 2.642583918555564E-4 0.0 0.0 8.675999392205698 0.0 14 2.642583918555564E-4 0.0 0.0 8.832704618576043 0.0 15 2.642583918555564E-4 0.0 0.0 9.157346052970595 0.0 16 2.642583918555564E-4 0.0 0.0 9.619269721934106 0.0 17 2.642583918555564E-4 0.0 0.0 10.144879663334809 0.0 18 2.642583918555564E-4 0.0 0.0 10.711053267885339 0.0 19 2.642583918555564E-4 0.0 0.0 11.2003276804059 0.0 20 2.642583918555564E-4 0.0 0.0 11.586409190906869 0.0 21 3.9638758778333454E-4 0.0 0.0 12.009090488679831 0.0 22 3.9638758778333454E-4 0.0 0.0 12.509199495266472 0.0 23 3.9638758778333454E-4 0.0 0.0 12.951303784840817 0.0 24 3.9638758778333454E-4 0.0 0.0 13.340424266848125 0.0 25 3.9638758778333454E-4 0.0 0.0 13.687395535354469 0.0 26 3.9638758778333454E-4 0.0 0.0 14.033177641097465 0.0 27 3.9638758778333454E-4 0.0 0.0 14.377374196489328 0.0 28 3.9638758778333454E-4 0.0 0.0 14.720513718313768 0.0 29 3.9638758778333454E-4 0.0 0.0 15.058764459888879 0.0 30 3.9638758778333454E-4 0.0 0.0 15.444185324410208 0.0 31 3.9638758778333454E-4 0.0 0.0 15.797234535929231 0.0 32 5.285167837111127E-4 0.0 0.0 16.15543678608944 0.0 33 5.285167837111127E-4 0.0 0.0 16.50875025600032 0.0 34 5.285167837111127E-4 0.0 0.0 16.86536695580939 0.0 35 5.285167837111127E-4 0.0 0.0 17.233082508076397 0.0 36 5.285167837111127E-4 0.0 0.0 17.60515832380902 0.0 37 5.285167837111127E-4 0.0 0.0 17.972477488488245 0.0 38 5.285167837111127E-4 0.0 0.0 18.363712037630396 0.0 39 5.285167837111127E-4 0.0 0.0 18.766045439230478 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCG 25 3.889539E-5 45.0 1 TAACCGA 20 7.031759E-4 45.0 40 CAATGCG 20 7.031759E-4 45.0 1 TAGGCGT 20 7.031759E-4 45.0 1 CGACTAA 25 3.889539E-5 45.0 15 CGTCCAA 20 7.031759E-4 45.0 14 CGAATAT 120 0.0 43.125004 14 AATGCGG 80 0.0 42.1875 2 TTGCGAG 70 0.0 41.785717 1 CGGTAGT 120 0.0 41.250004 12 CGACGGT 55 6.002665E-11 40.909092 28 TTACGGG 110 0.0 40.909092 3 TCGTCCC 90 0.0 40.0 38 TATAGCG 45 1.9268555E-8 40.0 1 TACGAAT 130 0.0 39.807693 12 GCTACGA 130 0.0 39.807693 10 TTAGCGG 75 0.0 39.000004 2 TACGGCT 625 0.0 38.879997 7 TCGCCTA 35 6.24546E-6 38.57143 31 ATAGCGG 105 0.0 38.57143 2 >>END_MODULE