##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935585.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 686739 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1883102605211 33.0 31.0 34.0 30.0 34.0 2 32.19259136294866 34.0 31.0 34.0 30.0 34.0 3 32.18479364066989 34.0 31.0 34.0 30.0 34.0 4 35.84207100514169 37.0 35.0 37.0 35.0 37.0 5 35.90618561054491 37.0 35.0 37.0 35.0 37.0 6 35.84769468458905 37.0 35.0 37.0 35.0 37.0 7 36.085986087873266 37.0 35.0 37.0 35.0 37.0 8 35.91133603887358 37.0 35.0 37.0 35.0 37.0 9 37.735966648173466 39.0 38.0 39.0 35.0 39.0 10 37.373974683249386 39.0 37.0 39.0 34.0 39.0 11 37.361311939470454 39.0 37.0 39.0 35.0 39.0 12 37.20257623347443 39.0 37.0 39.0 34.0 39.0 13 37.1474257323379 39.0 37.0 39.0 34.0 39.0 14 38.19778984446784 40.0 37.0 41.0 33.0 41.0 15 38.34675327890218 40.0 38.0 41.0 34.0 41.0 16 38.180396045659265 40.0 37.0 41.0 33.0 41.0 17 38.22869532675441 40.0 37.0 41.0 34.0 41.0 18 38.13440768618063 40.0 37.0 41.0 34.0 41.0 19 38.00394909856583 40.0 37.0 41.0 34.0 41.0 20 38.118111829967425 40.0 37.0 41.0 34.0 41.0 21 37.99777207934892 40.0 36.0 41.0 34.0 41.0 22 38.125469792745136 40.0 36.0 41.0 34.0 41.0 23 38.158119751463076 40.0 36.0 41.0 34.0 41.0 24 38.1064305362008 40.0 36.0 41.0 34.0 41.0 25 37.823643334658435 40.0 36.0 41.0 33.0 41.0 26 37.9115690240397 40.0 36.0 41.0 34.0 41.0 27 37.910265763266686 40.0 36.0 41.0 34.0 41.0 28 37.760885867847904 40.0 36.0 41.0 33.0 41.0 29 37.66675403610397 40.0 36.0 41.0 33.0 41.0 30 37.504640045199125 40.0 35.0 41.0 33.0 41.0 31 37.48484504302217 40.0 35.0 41.0 33.0 41.0 32 37.43332328584805 40.0 35.0 41.0 33.0 41.0 33 37.364971262735914 40.0 35.0 41.0 33.0 41.0 34 37.21764309293633 40.0 35.0 41.0 32.0 41.0 35 37.12828163246881 40.0 35.0 41.0 32.0 41.0 36 37.03410611600623 40.0 35.0 41.0 32.0 41.0 37 37.005625135604646 40.0 35.0 41.0 32.0 41.0 38 36.852089367285096 39.0 35.0 41.0 31.0 41.0 39 36.764754877762876 39.0 35.0 41.0 31.0 41.0 40 36.66895720208114 39.0 35.0 41.0 31.0 41.0 41 36.518220168069675 39.0 35.0 41.0 31.0 41.0 42 36.52451076755507 39.0 35.0 41.0 31.0 41.0 43 36.43982794045482 39.0 35.0 41.0 31.0 41.0 44 36.3143683408107 39.0 35.0 41.0 30.0 41.0 45 36.294596637150356 39.0 35.0 41.0 30.0 41.0 46 36.17808803635734 38.0 35.0 41.0 30.0 41.0 47 36.1210736538918 38.0 35.0 41.0 30.0 41.0 48 35.98494187748184 38.0 35.0 40.0 30.0 41.0 49 35.87943745731639 38.0 35.0 40.0 30.0 41.0 50 35.70460247634109 38.0 35.0 40.0 29.0 41.0 51 34.57704164172997 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 15.0 10 27.0 11 24.0 12 18.0 13 22.0 14 31.0 15 43.0 16 89.0 17 118.0 18 241.0 19 368.0 20 633.0 21 1069.0 22 1633.0 23 2310.0 24 3315.0 25 4560.0 26 5838.0 27 6810.0 28 7480.0 29 8513.0 30 9985.0 31 12437.0 32 16045.0 33 23044.0 34 44785.0 35 54761.0 36 48346.0 37 72879.0 38 127223.0 39 233937.0 40 131.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.30416795900626 19.954305784293595 23.065968293631204 12.67555796306894 2 33.00933833668977 24.74899488743176 23.758662315668687 18.483004460209774 3 32.515118553045625 24.569013846599656 25.624582264877922 17.291285335476797 4 29.33268679949734 25.182929759340883 26.043227485260047 19.44115595590173 5 26.224082220465128 28.903411630910725 24.751033507635363 20.121472640988788 6 26.101182545333817 34.64081696248502 24.337630453491062 14.920370038690098 7 79.24888494755649 6.580083554305202 9.490650742130562 4.680380756007741 8 80.28464962671407 6.6074593113249716 8.720052305169796 4.387838756791154 9 74.07384756071812 8.42124882961358 10.655722188487912 6.849181421180391 10 41.236918246961366 26.135693473066183 17.63304545103744 14.99434282893501 11 33.00132947160421 25.873585161174766 23.47150809841876 17.653577268802266 12 29.651148398445404 23.226291211071455 27.75566845628397 19.366891934199167 13 27.483512659103386 24.43446491316206 28.515345713582597 19.566676714151956 14 21.729361518713805 27.521809595785296 29.30997074580008 21.438858139700816 15 20.643941876025682 26.084145505060874 33.352408993809874 19.91950362510357 16 25.033091174376292 25.03527541030872 30.15352266290396 19.77811075241103 17 25.086677762585204 24.33996030515232 27.862987248430628 22.710374683831848 18 26.750483080180388 24.65783944118508 27.98690623366373 20.604771244970795 19 27.186310956564284 26.376541888548633 25.778789321707375 20.658357833179707 20 28.049957844246503 26.26645639755424 26.34625381695229 19.337331941246966 21 26.56875465060234 26.766355194622705 27.72363299594169 18.94125715883327 22 24.98751345125295 24.872040178291897 27.93754250159085 22.202903868864297 23 24.209197380664268 26.164671003103074 28.310901230307294 21.315230385925364 24 23.714395134104805 25.25937801697588 28.593250128505883 22.432976720413432 25 24.14454399706439 26.464785020218745 26.772179823775843 22.618491158941023 26 23.34962773338925 26.66806457766342 26.73417411855159 23.24813357039574 27 23.352103200779336 26.57894775162034 27.76251239553892 22.30643665206141 28 22.037921248101537 28.087235470826617 27.969577961933133 21.90526531913871 29 23.883891842461257 26.92056225145215 27.699752016413804 21.495793889672786 30 24.597700145178884 25.493382493203388 28.064082569942876 21.84483479167486 31 25.00542418589886 26.64928014864454 26.572395043823054 21.772900621633546 32 25.601283748265352 26.90381644263687 27.14859648279769 20.346303326300095 33 25.89600998341437 26.20748202737867 26.30198663538841 21.594521353818553 34 23.830887717167656 27.094281815944633 28.481126017307883 20.593704449579825 35 22.921808722090926 27.01928971559792 28.1631012655463 21.895800296764854 36 24.746373804312846 28.524519504498798 26.007114784510566 20.721991906677793 37 23.8081716634704 28.4399167660494 26.41527567241703 21.336635898063168 38 23.999365115422307 27.698441474854345 26.40959665899272 21.89259675073063 39 24.542511783952854 25.650065017422925 26.966285590304324 22.8411376083199 40 24.823841372049642 25.237535657651595 29.06679247865637 20.871830491642385 41 22.234356866291268 25.547697160056444 28.339150681700037 23.878795291952258 42 24.01960570172948 25.921201504501713 27.731933092484915 22.327259701283893 43 23.511698039575442 26.118510817064415 27.40327839251885 22.966512750841297 44 23.161200980285088 26.295433927591123 27.10403806977614 23.439327022347644 45 22.802549440180332 25.50736160317093 26.660929406950824 25.029159549697923 46 22.639605439621167 27.118162795472518 26.477744820084485 23.764486944821833 47 22.25255883239484 26.60821651311488 28.542867086331196 22.596357568159082 48 22.779979002211903 26.1913186814787 28.4817084802232 22.546993836086198 49 24.069115049531188 25.7921859687596 27.923272160165652 22.215426821543556 50 21.00026356446918 26.666025957459823 29.224057465791226 23.109653012279775 51 21.840320704081172 26.177630802968814 27.209609473176855 24.77243901977316 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 292.0 1 856.0 2 1420.0 3 2830.5 4 4241.0 5 2950.5 6 1660.0 7 1633.0 8 1606.0 9 1633.5 10 1661.0 11 1692.5 12 1724.0 13 1738.0 14 1752.0 15 1634.5 16 1517.0 17 1625.5 18 1734.0 19 1916.0 20 2098.0 21 2399.5 22 2701.0 23 3054.0 24 3407.0 25 4039.5 26 5511.5 27 6351.0 28 6999.5 29 7648.0 30 9195.5 31 10743.0 32 12808.5 33 14874.0 34 17216.5 35 19559.0 36 20322.0 37 21085.0 38 22788.0 39 24491.0 40 27121.0 41 29751.0 42 32920.0 43 36089.0 44 38371.0 45 40653.0 46 46736.0 47 52819.0 48 52690.5 49 52562.0 50 52971.5 51 53381.0 52 50669.5 53 47958.0 54 44778.5 55 41599.0 56 40883.5 57 40168.0 58 38723.0 59 37278.0 60 35198.0 61 33118.0 62 30764.0 63 28410.0 64 24209.0 65 20008.0 66 16628.0 67 13248.0 68 11228.5 69 9209.0 70 7695.5 71 6182.0 72 5099.0 73 4016.0 74 3181.5 75 1923.5 76 1500.0 77 1039.0 78 578.0 79 433.0 80 288.0 81 253.5 82 219.0 83 129.5 84 40.0 85 31.0 86 22.0 87 19.5 88 17.0 89 25.0 90 33.0 91 19.0 92 5.0 93 3.5 94 2.0 95 1.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 686739.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.631647311577 #Duplication Level Percentage of deduplicated Percentage of total 1 73.89956180254322 20.419666282079614 2 8.098378897904519 4.475430990048306 3 2.9733511008757114 2.4647576685866057 4 1.6506795985012115 1.8244398596080398 5 1.1635411264486761 1.6075279019272415 6 0.8749204440248209 1.4505295880989317 7 0.7551855874654485 1.4606915265341949 8 0.659572932623039 1.458006932040188 9 0.5884599271378432 1.4634105447302264 >10 9.063054926965092 56.338690523237055 >50 0.2266854351908335 3.7819235644187197 >100 0.041311831646912656 1.8859859521185989 >500 0.0031778332036086652 0.5188034608722305 >1k 0.002118555469072444 0.8501352057000808 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2295 0.33418809766155705 No Hit GAATCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTC 1264 0.18405828123930634 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGC 1132 0.16483700503393572 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCG 1118 0.16279838483033582 No Hit GCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTCTGC 829 0.12071543919888052 TruSeq Adapter, Index 22 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.824629153142605E-4 0.0 0.0 0.07135170712599692 0.0 2 5.824629153142605E-4 0.0 0.0 0.3628743962407843 0.0 3 5.824629153142605E-4 0.0 0.0 0.540816816869291 0.0 4 5.824629153142605E-4 0.0 0.0 0.776859913300395 0.0 5 5.824629153142605E-4 0.0 0.0 1.4381009379109093 0.0 6 5.824629153142605E-4 0.0 0.0 1.9366891934199164 0.0 7 5.824629153142605E-4 0.0 0.0 2.3043689087120436 0.0 8 5.824629153142605E-4 0.0 0.0 2.875182565720019 0.0 9 5.824629153142605E-4 0.0 0.0 3.1187976800502084 0.0 10 5.824629153142605E-4 0.0 0.0 3.7021342897374403 0.0 11 7.280786441428257E-4 0.0 0.0 4.302071092511128 0.0 12 7.280786441428257E-4 0.0 0.0 4.924432717524416 0.0 13 7.280786441428257E-4 0.0 0.0 5.202849991044633 0.0 14 7.280786441428257E-4 0.0 0.0 5.350941187263284 0.0 15 7.280786441428257E-4 0.0 0.0 5.528301144976476 0.0 16 7.280786441428257E-4 0.0 0.0 5.8308906294822345 0.0 17 7.280786441428257E-4 0.0 0.0 6.182843846060876 0.0 18 7.280786441428257E-4 0.0 0.0 6.5811028644070015 0.0 19 7.280786441428257E-4 0.0 0.0 6.834183001111048 0.0 20 7.280786441428257E-4 0.0 0.0 7.096873775917779 0.0 21 7.280786441428257E-4 0.0 0.0 7.410675671543338 0.0 22 7.280786441428257E-4 0.0 0.0 7.757095490426494 0.0 23 7.280786441428257E-4 0.0 0.0 8.070023691679081 0.0 24 7.280786441428257E-4 0.0 0.0 8.330675846282212 0.0 25 7.280786441428257E-4 0.0 0.0 8.5936578525466 0.0 26 7.280786441428257E-4 0.0 0.0 8.847029220708304 0.0 27 7.280786441428257E-4 0.0 0.0 9.138260678365434 0.0 28 7.280786441428257E-4 0.0 0.0 9.397311059951452 0.0 29 7.280786441428257E-4 0.0 0.0 9.673107250352754 0.0 30 0.001019310101799956 0.0 0.0 10.033360563474623 0.0 31 0.001019310101799956 0.0 0.0 10.328814877267783 0.0 32 0.001019310101799956 0.0 0.0 10.626307811264542 0.0 33 0.001019310101799956 0.0 0.0 10.93996409116127 0.0 34 0.001019310101799956 0.0 0.0 11.248815052006657 0.0 35 0.001019310101799956 0.0 0.0 11.56625734085293 0.0 36 0.001019310101799956 0.0 0.0 11.871759139935259 0.0 37 0.001164925830628521 0.0 0.0 12.175367934542818 0.0 38 0.0014561572882856515 0.0 0.0 12.52630184101966 0.0 39 0.0014561572882856515 0.0 0.0 13.020812856121466 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTCA 20 7.0313E-4 45.000004 44 CCGGCAT 20 7.0313E-4 45.000004 33 ATCTCGA 30 2.1642209E-6 44.999996 28 ACGGGTA 150 0.0 42.0 5 TACGGGT 125 0.0 41.399998 4 AACACGT 165 0.0 40.90909 41 ATAGCGG 50 1.0804797E-9 40.500004 2 GCGAGAC 190 0.0 40.263157 21 CACGACC 180 0.0 40.0 27 GCGTTAG 40 3.455516E-7 39.375004 1 GTTCGCC 40 3.455516E-7 39.375004 22 CTACGAA 75 0.0 39.0 11 TACGAAT 75 0.0 39.0 12 GCGATCA 70 0.0 38.571426 9 TCACGAC 30 1.13944334E-4 37.499996 25 ATTACGG 30 1.13944334E-4 37.499996 2 CGATGAC 30 1.13944334E-4 37.499996 10 CGGTCTA 30 1.13944334E-4 37.499996 31 TAGTGCG 30 1.13944334E-4 37.499996 1 TACGTAG 30 1.13944334E-4 37.499996 1 >>END_MODULE