##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935578.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 840697 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05679929867717 33.0 31.0 34.0 30.0 34.0 2 32.06816367847156 33.0 31.0 34.0 30.0 34.0 3 32.07482006002162 33.0 31.0 34.0 30.0 34.0 4 35.75459767312123 37.0 35.0 37.0 33.0 37.0 5 35.824099526940145 37.0 35.0 37.0 35.0 37.0 6 35.76733353396051 37.0 35.0 37.0 35.0 37.0 7 36.05625689160304 37.0 35.0 37.0 35.0 37.0 8 35.8791312446696 37.0 35.0 37.0 35.0 37.0 9 37.71236961711532 39.0 38.0 39.0 35.0 39.0 10 37.276634744741564 39.0 37.0 39.0 34.0 39.0 11 37.24881021343005 39.0 37.0 39.0 34.0 39.0 12 37.241034522544986 39.0 37.0 39.0 34.0 39.0 13 37.21502515174908 39.0 37.0 39.0 34.0 39.0 14 38.36838956247019 40.0 38.0 41.0 34.0 41.0 15 38.45120180041085 40.0 38.0 41.0 34.0 41.0 16 38.25835586424122 40.0 37.0 41.0 34.0 41.0 17 38.295045658542854 40.0 37.0 41.0 34.0 41.0 18 38.22899927084312 40.0 37.0 41.0 34.0 41.0 19 38.10061651225114 40.0 37.0 41.0 34.0 41.0 20 38.23000914717193 40.0 37.0 41.0 34.0 41.0 21 38.19763244070099 40.0 37.0 41.0 34.0 41.0 22 38.293329225630636 40.0 37.0 41.0 34.0 41.0 23 38.31076475828985 40.0 37.0 41.0 34.0 41.0 24 38.228760183514396 40.0 37.0 41.0 34.0 41.0 25 37.99434754733275 40.0 37.0 41.0 34.0 41.0 26 38.09319291016859 40.0 37.0 41.0 34.0 41.0 27 38.08577168706442 40.0 37.0 41.0 34.0 41.0 28 37.92509072828855 40.0 37.0 41.0 33.0 41.0 29 37.90200155347289 40.0 37.0 41.0 33.0 41.0 30 37.772417410791284 40.0 36.0 41.0 33.0 41.0 31 37.76485107000501 40.0 36.0 41.0 33.0 41.0 32 37.740511742042614 40.0 37.0 41.0 33.0 41.0 33 37.63951578273742 40.0 36.0 41.0 33.0 41.0 34 37.60314001358397 40.0 36.0 41.0 33.0 41.0 35 37.53105102076015 40.0 36.0 41.0 33.0 41.0 36 37.46383179671154 40.0 36.0 41.0 33.0 41.0 37 37.481913222005076 40.0 36.0 41.0 33.0 41.0 38 37.32139641273848 40.0 36.0 41.0 32.0 41.0 39 37.28597818238914 40.0 36.0 41.0 32.0 41.0 40 37.19704364354815 40.0 36.0 41.0 32.0 41.0 41 37.05861802766038 40.0 35.0 41.0 31.0 41.0 42 37.12122084413291 40.0 35.0 41.0 32.0 41.0 43 37.06396002364705 40.0 35.0 41.0 32.0 41.0 44 36.99709764635772 39.0 35.0 41.0 31.0 41.0 45 36.98196139631758 39.0 35.0 41.0 31.0 41.0 46 36.86861616016234 39.0 35.0 41.0 31.0 41.0 47 36.788595653368574 39.0 35.0 41.0 31.0 41.0 48 36.712115066427025 39.0 35.0 41.0 31.0 41.0 49 36.67754137340802 39.0 35.0 41.0 31.0 41.0 50 36.53870419425786 39.0 35.0 41.0 31.0 41.0 51 35.40817916562091 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 11.0 9 10.0 10 16.0 11 17.0 12 10.0 13 14.0 14 14.0 15 23.0 16 43.0 17 75.0 18 164.0 19 303.0 20 644.0 21 1098.0 22 1672.0 23 2463.0 24 3450.0 25 4715.0 26 6038.0 27 6958.0 28 7857.0 29 9019.0 30 10944.0 31 14368.0 32 19094.0 33 25585.0 34 44800.0 35 61852.0 36 56549.0 37 85818.0 38 165492.0 39 311362.0 40 216.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.20034090760405 20.779781538413957 24.830943847783445 12.188933706198547 2 30.071476405887022 27.017700788750286 25.733647199882952 17.17717560547974 3 30.40167860715573 25.899699891875432 27.551900387416634 16.146721113552207 4 27.500514454077983 24.464105379227 29.398701315694005 18.636678851001015 5 26.00413704342944 29.006764625067056 25.682023368704776 19.307074962798726 6 24.048735751406277 35.43369370891058 25.576991472551942 14.940579067131202 7 79.20356561281888 4.991810366874153 11.274692308881797 4.529931711425163 8 80.32406443700881 6.793529654560442 8.160014844825186 4.7223910636055555 9 74.36044139565146 7.470824803704545 9.77189165656592 8.39684214407807 10 36.88606001924594 32.35125140211039 17.397825851644527 13.364862726999144 11 26.818223450303734 26.296632437132523 28.56724836653396 18.317895746029784 12 25.457090961428435 22.177788192416532 31.76340584062986 20.60171500552518 13 23.309706112903935 24.471718110091984 33.68181401860599 18.53676175839809 14 19.691874718239745 29.70594637544799 28.999627689881137 21.602551216431127 15 17.86327297468648 27.058024472550752 35.36934234331751 19.709360209445258 16 20.67510648902042 27.127133794934444 30.397515394963943 21.8002443210812 17 21.56151383911207 25.94537627706534 29.08955307322377 23.403556810598825 18 21.515480607162864 26.496109775579075 29.891149843522697 22.097259773735363 19 21.94583779887403 27.755540938054974 28.300921735179262 21.997699527891736 20 23.63848092713546 26.803354835333064 30.11453591484209 19.44362832268939 21 23.104043430629584 28.01366009394586 29.633506483310875 19.24878999211369 22 21.37773775807455 25.087992463396443 29.40774143359617 24.126528344932836 23 20.902061027932774 26.587581494878656 29.77196302591778 22.73839445127079 24 21.6889081321808 25.14996485059421 29.360280814609784 23.80084620261521 25 20.05157625161027 29.006288829387994 28.24679997668601 22.69533494231572 26 20.05978372707408 27.310077233533605 28.46102698118347 24.169112058208846 27 21.679630116439096 27.784564474477726 27.768268472469863 22.76753693661331 28 18.715304086965933 26.989866741525187 31.283328000456763 23.011501171052114 29 20.022433766267753 24.849975674945906 29.331138329267265 25.79645222951908 30 20.45172041770103 27.00057214430407 29.048396746984945 23.49931069100996 31 21.450058701291905 26.691423901833833 27.94264758884592 23.91586980802834 32 21.91205630566066 27.649557450544016 26.328867594388942 24.109518649406386 33 20.377734189606958 27.87294352186341 27.276057842480704 24.473264446048933 34 20.609446685309926 26.024715206548855 29.774698851072383 23.59113925706884 35 20.432212794859502 25.62242995990232 27.565460564269884 26.37989668096829 36 20.59136644950559 28.09240427883054 27.909341891311612 23.406887380352256 37 19.84079876578601 26.909219373924252 29.795633860951092 23.454347999338644 38 20.35549074161083 27.917787264614958 27.74543027987491 23.9812917138993 39 20.80035970153337 27.03661366699298 28.499328533347924 23.66369809812572 40 22.152927868185564 25.848313958536785 29.64575822204671 22.35299995123094 41 19.22940131819193 27.12297058274265 29.1358242030125 24.511803896052918 42 21.746717307186774 25.619694134747718 28.90720437922343 23.726384178842082 43 21.322783357142942 26.628024127598888 27.505153461948833 24.544039053309337 44 20.24879356058128 25.50026941930327 28.51907405402898 25.73186296608647 45 20.245819837587145 24.795853916452657 27.91957149841144 27.03875474754876 46 22.926214795580336 26.639086377137065 26.995457340754157 23.439241486528438 47 19.5848206904509 25.54951427208614 31.25858662514556 23.6070784123174 48 20.09285152676886 25.38191524413671 28.839165597117628 25.6860676319768 49 20.433521232976922 23.965947303249564 31.29605553487166 24.30447592890185 50 20.372143590377984 24.08489622301495 30.59259162337917 24.950368563227894 51 19.766574639852408 23.80881578023949 28.09157163639218 28.333037943515915 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 284.0 1 684.5 2 1085.0 3 2489.5 4 3894.0 5 2700.0 6 1506.0 7 1497.5 8 1489.0 9 1527.5 10 1566.0 11 1564.5 12 1563.0 13 1683.0 14 1803.0 15 1751.0 16 1699.0 17 1848.0 18 1997.0 19 2064.5 20 2132.0 21 2187.5 22 2243.0 23 2528.5 24 2814.0 25 3638.0 26 6473.0 27 8484.0 28 9651.5 29 10819.0 30 12784.5 31 14750.0 32 17150.5 33 19551.0 34 22644.5 35 25738.0 36 27447.0 37 29156.0 38 31358.0 39 33560.0 40 37012.0 41 40464.0 42 45085.5 43 49707.0 44 55774.5 45 61842.0 46 81183.5 47 100525.0 48 96041.0 49 91557.0 50 86941.5 51 82326.0 52 70641.0 53 58956.0 54 51482.0 55 44008.0 56 39601.5 57 35195.0 58 32612.0 59 30029.0 60 27591.0 61 25153.0 62 21991.5 63 18830.0 64 16018.0 65 13206.0 66 10168.0 67 7130.0 68 5665.5 69 4201.0 70 3553.5 71 2906.0 72 2271.0 73 1636.0 74 1498.0 75 965.0 76 570.0 77 425.5 78 281.0 79 209.0 80 137.0 81 78.5 82 20.0 83 20.5 84 21.0 85 18.0 86 15.0 87 11.5 88 8.0 89 8.0 90 8.0 91 8.0 92 8.0 93 5.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 840697.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.273854585444166 #Duplication Level Percentage of deduplicated Percentage of total 1 72.97159552981576 21.36159876407674 2 10.801295667981407 6.323911174377514 3 3.8011636077303574 3.338241321245424 4 1.9422195182877264 2.2742500700546526 5 1.1794193452192694 1.7263075203604334 6 0.833662117710354 1.4642702164347805 7 0.6304097397621024 1.2918166135730438 8 0.4956819628771681 1.1608417361515002 9 0.4218336269831511 1.1113826629999737 >10 6.442300397445452 45.07579225947623 >50 0.4119037957791012 7.252118094734455 >100 0.06035817964527936 2.9951623654027473 >500 0.003670429843294015 0.7514170889606542 >1k 0.0032626043051502355 1.637860032324629 >5k 0.0012234766144313383 2.235030079827202 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGC 6894 0.8200338528625651 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCG 6149 0.7314169076373533 No Hit GAATCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTC 5678 0.6753919664278568 No Hit GCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCTGC 3447 0.41001692643128257 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2178 0.25907074724900886 No Hit CCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCTGC 2004 0.23837363520983185 No Hit CTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCTGCT 1559 0.18544136591423543 Illumina Single End Adapter 2 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCT 1287 0.15308725973805068 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCTCATGAT 1143 0.13595861529183523 No Hit GAACTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCT 1087 0.12929747578497366 No Hit TCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCTGC 1014 0.12061420464210054 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCC 996 0.11847312408632361 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCTCATGATCGTA 928 0.11038459754227742 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTC 880 0.10467504939353893 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.757956790615406E-4 0.0 0.0 0.19305409677922009 0.0 2 4.757956790615406E-4 0.0 0.0 1.0886205136928049 0.0 3 4.757956790615406E-4 0.0 0.0 1.4848393654313028 0.0 4 4.757956790615406E-4 0.0 0.0 2.0780376283012787 0.0 5 4.757956790615406E-4 0.0 0.0 3.961117977107091 0.0 6 4.757956790615406E-4 0.0 0.0 4.8211186670108255 0.0 7 4.757956790615406E-4 0.0 0.0 5.718945113399952 0.0 8 4.757956790615406E-4 0.0 0.0 6.960771835750574 0.0 9 5.947445988269258E-4 0.0 0.0 7.383516296596753 0.0 10 5.947445988269258E-4 0.0 0.0 8.983022420681886 0.0 11 5.947445988269258E-4 0.0 0.0 10.265410724672504 0.0 12 5.947445988269258E-4 0.0 0.0 12.125414983043832 0.0 13 5.947445988269258E-4 0.0 0.0 12.613224503001677 0.0 14 5.947445988269258E-4 0.0 0.0 12.816151360121424 0.0 15 5.947445988269258E-4 0.0 0.0 13.23663579149206 0.0 16 5.947445988269258E-4 0.0 0.0 13.895018062393467 0.0 17 5.947445988269258E-4 0.0 0.0 14.720523565565239 0.0 18 5.947445988269258E-4 0.0 0.0 15.609666740811493 0.0 19 5.947445988269258E-4 0.0 0.0 16.303733687642517 0.0 20 5.947445988269258E-4 0.0 0.0 16.86112832566311 0.0 21 5.947445988269258E-4 0.0 0.0 17.53485500721425 0.0 22 5.947445988269258E-4 0.0 0.0 18.257469694788966 0.0 23 7.136935185923109E-4 0.0 0.0 18.979132791005558 0.0 24 7.136935185923109E-4 0.0 0.0 19.531888421155305 0.0 25 8.32642438357696E-4 0.0 0.0 20.027072774138603 0.0 26 8.32642438357696E-4 0.0 0.0 20.506080074033807 0.0 27 8.32642438357696E-4 0.0 0.0 20.99317590047306 0.0 28 9.515913581230812E-4 0.0 0.0 21.47004211981249 0.0 29 9.515913581230812E-4 0.0 0.0 21.958565333288927 0.0 30 9.515913581230812E-4 0.0 0.0 22.543437171775324 0.0 31 9.515913581230812E-4 0.0 0.0 23.071332477694103 0.0 32 9.515913581230812E-4 0.0 0.0 23.5854297089201 0.0 33 9.515913581230812E-4 0.0 0.0 24.098456399868205 0.0 34 9.515913581230812E-4 0.0 0.0 24.607557776464052 0.0 35 9.515913581230812E-4 0.0 0.0 25.136166775901426 0.0 36 9.515913581230812E-4 0.0 0.0 25.6303995375266 0.0 37 9.515913581230812E-4 0.0 0.0 26.142117790357286 0.0 38 9.515913581230812E-4 0.0 0.0 26.648126495039236 0.0 39 9.515913581230812E-4 0.0 0.0 27.166505887376783 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGCTC 20 7.032203E-4 45.000004 32 AGTCCGT 20 7.032203E-4 45.000004 14 AATTTCG 20 7.032203E-4 45.000004 37 GTCGAGA 20 7.032203E-4 45.000004 2 CAACCGA 20 7.032203E-4 45.000004 24 GTTAACG 20 7.032203E-4 45.000004 1 TACGAGA 20 7.032203E-4 45.000004 1 CGTACCG 20 7.032203E-4 45.000004 2 ACGTAAG 35 1.2114106E-7 45.000004 1 ACGACAG 20 7.032203E-4 45.000004 1 CCGATCG 25 3.889908E-5 45.0 40 TGTACCG 25 3.889908E-5 45.0 1 TCGCGCG 25 3.889908E-5 45.0 1 CGTTTCA 70 0.0 41.785717 11 CGTTTTT 1415 0.0 40.865723 1 TCTCGAG 50 1.0804797E-9 40.5 1 ACGGGTA 90 0.0 40.0 5 ACGGCTG 865 0.0 39.53757 8 TACGGCT 860 0.0 39.505814 7 TCGTGTA 75 0.0 39.000004 17 >>END_MODULE