##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935575.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1086348 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.098603762330306 33.0 31.0 34.0 30.0 34.0 2 32.12365190528266 33.0 31.0 34.0 30.0 34.0 3 32.116605360344934 33.0 31.0 34.0 30.0 34.0 4 35.78161049682054 37.0 35.0 37.0 35.0 37.0 5 35.843433227658174 37.0 35.0 37.0 35.0 37.0 6 35.77471215485277 37.0 35.0 37.0 35.0 37.0 7 36.03383170033912 37.0 35.0 37.0 35.0 37.0 8 35.81640413569133 37.0 35.0 37.0 35.0 37.0 9 37.63994778836984 39.0 37.0 39.0 35.0 39.0 10 37.308925869058534 39.0 37.0 39.0 34.0 39.0 11 37.28711978113827 39.0 37.0 39.0 34.0 39.0 12 37.16404411845928 39.0 37.0 39.0 34.0 39.0 13 37.07084101963643 39.0 37.0 39.0 33.0 39.0 14 38.10913629886556 40.0 37.0 41.0 33.0 41.0 15 38.207704161097546 40.0 37.0 41.0 33.0 41.0 16 38.119532599130295 40.0 37.0 41.0 33.0 41.0 17 38.13975908272487 40.0 37.0 41.0 33.0 41.0 18 38.05291030130308 40.0 37.0 41.0 33.0 41.0 19 37.904328079031764 40.0 37.0 41.0 33.0 41.0 20 37.941438655016626 40.0 36.0 41.0 33.0 41.0 21 37.944619956036185 40.0 36.0 41.0 33.0 41.0 22 38.053527046581756 40.0 36.0 41.0 34.0 41.0 23 38.05651043680294 40.0 36.0 41.0 34.0 41.0 24 37.97672108753365 40.0 36.0 41.0 34.0 41.0 25 37.776972020015684 40.0 36.0 41.0 33.0 41.0 26 37.81194792092405 40.0 36.0 41.0 33.0 41.0 27 37.791111135658184 40.0 36.0 41.0 33.0 41.0 28 37.65351526398539 40.0 35.0 41.0 33.0 41.0 29 37.6262155405082 40.0 35.0 41.0 33.0 41.0 30 37.45684624079945 40.0 35.0 41.0 33.0 41.0 31 37.41978813418905 40.0 35.0 41.0 33.0 41.0 32 37.296949043952765 40.0 35.0 41.0 33.0 41.0 33 37.19013612580867 40.0 35.0 41.0 32.0 41.0 34 37.083976773556905 40.0 35.0 41.0 32.0 41.0 35 36.93972557596645 40.0 35.0 41.0 31.0 41.0 36 36.836556978058596 40.0 35.0 41.0 31.0 41.0 37 36.78660981563919 40.0 35.0 41.0 31.0 41.0 38 36.66660038956209 39.0 35.0 41.0 31.0 41.0 39 36.604985695191594 39.0 35.0 41.0 31.0 41.0 40 36.48619134936503 39.0 35.0 41.0 30.0 41.0 41 36.30050591523158 39.0 35.0 41.0 30.0 41.0 42 36.345926903717775 39.0 35.0 41.0 30.0 41.0 43 36.28377831044932 39.0 35.0 41.0 30.0 41.0 44 36.20066405976722 39.0 35.0 41.0 30.0 41.0 45 36.194292252574684 39.0 35.0 41.0 30.0 41.0 46 36.092747443728896 39.0 35.0 41.0 30.0 41.0 47 35.954502608740476 38.0 35.0 41.0 29.0 41.0 48 35.87379826722192 38.0 35.0 40.0 29.0 41.0 49 35.83956061961729 38.0 35.0 40.0 29.0 41.0 50 35.6916899557048 38.0 35.0 40.0 29.0 41.0 51 34.55603913294819 37.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 24.0 10 28.0 11 34.0 12 26.0 13 33.0 14 37.0 15 56.0 16 107.0 17 186.0 18 342.0 19 710.0 20 1462.0 21 2297.0 22 3270.0 23 4416.0 24 5794.0 25 7943.0 26 10341.0 27 11720.0 28 12359.0 29 13799.0 30 16477.0 31 20339.0 32 26970.0 33 38560.0 34 70076.0 35 82662.0 36 77543.0 37 114390.0 38 200699.0 39 363427.0 40 211.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.77934510856558 18.819475895385274 22.016977984955098 13.384201011094051 2 33.05193179349527 27.261798245129555 23.220643845250326 16.465626116124852 3 31.277362318520403 26.416765161808186 26.414924131125566 15.890948388545844 4 27.742583407895076 23.739538343146027 30.148166149337047 18.36971209962185 5 27.8896817594362 27.846509589928825 24.969807096805074 19.294001553829894 6 24.5854919418087 35.23465777080641 25.697290371041326 14.482559916343565 7 75.96304315007714 6.031032413186198 13.515742653367061 4.490181783369602 8 76.37847172360975 8.636735189828673 10.43312087839256 4.5516722081690215 9 70.61310003792524 7.212053596085233 12.328461966147128 9.846384399842407 10 42.209586614970526 22.943752830584675 19.544289675131726 15.302370879313074 11 32.26995401105355 24.642932099106364 25.18465537746652 17.902458512373567 12 28.230824744925197 21.157676913843446 29.997385736430683 20.61411260480067 13 26.035671810506393 21.90670024706632 33.15180770802726 18.905820234400025 14 21.58967476351961 26.363743478148805 31.350175082017916 20.696406676313668 15 20.02415432255594 24.629768729725647 35.3208180067529 20.02525894096551 16 23.80968161215375 24.124405807347184 30.24923873381274 21.816673846686328 17 24.263127469282402 24.36373979608744 29.53887704492483 21.834255689705326 18 24.45395029953569 24.028119902646296 29.76145765445327 21.756472143364743 19 24.61605305114015 25.760529774989234 27.378887796544017 22.244529377326604 20 24.80024817093602 26.442631642898963 29.77756667292617 18.97955351323885 21 24.294240887818635 27.175914163785453 29.80831188532588 18.721533063070027 22 23.24043492508846 22.948999768030134 31.23998939566327 22.570575911218135 23 22.81165887910688 25.745525374925897 30.405910444903473 21.036905301063747 24 22.903250155567093 24.88530378847294 29.150143416290174 23.061302639669794 25 22.952129520190585 27.63248977307456 27.69232327025962 21.723057436475237 26 21.771844749564593 25.241911431695918 28.961990080526682 24.0242537382128 27 23.773137153103793 25.990382455714006 28.535331219830113 21.701149171352093 28 21.569975735215603 26.344688810583715 29.785851310997952 22.29948414320273 29 24.272608777297883 25.39987186426449 28.189677709168702 22.13784164926893 30 23.765773030373325 26.888805428831276 28.69375191006933 20.651669630726065 31 25.67906416728341 25.28950207484158 26.657387872026273 22.374045885848734 32 26.163347288345907 25.891611159591587 26.7660086823007 21.17903286976181 33 24.60519097011271 25.040594726551713 27.58149322316606 22.77272108016952 34 24.074790030450647 25.96663315990824 28.63631175277167 21.322265056869437 35 22.384723863807913 26.745112984052994 28.59507266548104 22.27509048665805 36 26.873248719563158 26.466657093307116 26.213607425981362 20.44648676114836 37 22.831173804342622 28.23432270322217 27.611409971758587 21.323093520676615 38 23.793388490612585 25.600636260203913 27.800115616726867 22.805859632456635 39 23.264000117825965 25.710729895024432 27.409540957409597 23.61572902974001 40 23.75785659843807 24.029316572589998 31.05330888444587 21.159517944526062 41 22.35848917658062 26.063011116143265 27.78373044365157 23.79476926362455 42 22.20283003236532 24.874441707445495 30.691270200709162 22.23145805948002 43 24.33851767573558 24.733326705622876 27.861329886923897 23.066825731717643 44 23.537117019592248 24.89193149893036 28.135919613236275 23.435031868241115 45 22.015689263477263 24.507156086263336 27.47747498959818 25.999679660661222 46 23.971784363758207 25.877895481006085 27.47471344357425 22.675606711661455 47 21.02318962247825 25.382474124313752 31.90441736901987 21.689918884188124 48 22.046526527411107 26.581353304834177 28.282925913243268 23.089194254511447 49 22.348547610894485 24.353798230401306 30.52465692393229 22.772997234771914 50 21.647391075419662 24.275922632526594 29.692511055389247 24.384175236664493 51 21.835176205046633 24.538177453265437 27.726658492490436 25.899987849197494 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 502.0 1 1202.5 2 1903.0 3 6367.0 4 10831.0 5 7027.0 6 3223.0 7 3205.0 8 3187.0 9 3125.5 10 3064.0 11 3110.5 12 3157.0 13 3198.5 14 3240.0 15 3161.5 16 3083.0 17 3153.5 18 3224.0 19 3297.0 20 3370.0 21 3764.0 22 4158.0 23 4873.0 24 5588.0 25 6348.5 26 8454.5 27 9800.0 28 10791.0 29 11782.0 30 13796.0 31 15810.0 32 19371.5 33 22933.0 34 25708.0 35 28483.0 36 30454.0 37 32425.0 38 34920.5 39 37416.0 40 42220.0 41 47024.0 42 49916.0 43 52808.0 44 57917.0 45 63026.0 46 88567.5 47 114109.0 48 102706.0 49 91303.0 50 90468.5 51 89634.0 52 80724.0 53 71814.0 54 67565.0 55 63316.0 56 60551.5 57 57787.0 58 55745.5 59 53704.0 60 49698.0 61 45692.0 62 41161.0 63 36630.0 64 31577.0 65 26524.0 66 23058.0 67 19592.0 68 17120.0 69 14648.0 70 12142.0 71 9636.0 72 8117.5 73 6599.0 74 5262.5 75 3026.5 76 2127.0 77 1724.0 78 1321.0 79 884.0 80 447.0 81 312.5 82 178.0 83 146.0 84 114.0 85 85.5 86 57.0 87 36.0 88 15.0 89 13.5 90 12.0 91 7.0 92 2.0 93 4.5 94 7.0 95 6.0 96 5.0 97 4.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1086348.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.8364216010734 #Duplication Level Percentage of deduplicated Percentage of total 1 73.9093721235359 19.834630705778313 2 9.202943464456546 4.939481415659979 3 3.3781129610208676 2.7196939091401933 4 1.8212253917245231 1.9550068977159745 5 1.10189331479084 1.4785436777565637 6 0.8074999528925455 1.3002245507202759 7 0.6592845649372093 1.2384986977814643 8 0.5547376945552401 1.1909739719273527 9 0.4867098592425806 1.1755395882029687 >10 7.575419016744095 48.95450823391205 >50 0.4458612091179044 7.258651217087321 >100 0.04969348100227533 2.437700905465481 >500 0.002070561708427655 0.4012825022179364 >1k 0.0037960297987840344 1.7059831464012476 >5k 6.901872361425517E-4 1.5450256137784057 >10k+ 6.901872361425517E-4 1.864254966454433 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTC 10089 0.9287079278463254 RNA PCR Primer, Index 38 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGC 10041 0.9242894542080438 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCG 9690 0.8919793657281093 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6993 0.6437163781771587 No Hit GCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 3026 0.27854794228000607 RNA PCR Primer, Index 27 (95% over 23bp) GAACTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCT 2438 0.2244216402110558 RNA PCR Primer, Index 27 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCT 1953 0.17977664615758487 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1925 0.17719920320192056 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAGCTATGT 1667 0.15344990739615666 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTC 1581 0.14553347546090203 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAGCTATGTCGTA 1461 0.13448729136519788 No Hit CCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 1164 0.10714798572833013 RNA PCR Primer, Index 38 (96% over 25bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCC 1140 0.10493874890918932 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.001012566875439546 0.0 0.0 0.09775872924698163 0.0 2 0.001012566875439546 0.0 0.0 0.5796485104220747 0.0 3 0.001012566875439546 0.0 0.0 0.8149322316605728 0.0 4 0.001012566875439546 0.0 0.0 1.2955332913578337 0.0 5 0.001012566875439546 0.0 0.0 2.8809368636937704 0.0 6 0.001012566875439546 0.0 0.0 3.5812649353614128 0.0 7 0.001012566875439546 0.0 0.0 4.261065514917871 0.0 8 0.001012566875439546 0.0 0.0 5.066056180892311 0.0 9 0.001012566875439546 0.0 0.0 5.377742675459429 0.0 10 0.001012566875439546 0.0 0.0 6.863822642468159 0.0 11 0.001012566875439546 0.0 0.0 7.686579254529856 0.0 12 0.001012566875439546 0.0 0.0 9.224208080651872 0.0 13 0.001012566875439546 0.0 0.0 9.540313048857271 0.0 14 0.001012566875439546 0.0 0.0 9.731412033712953 0.0 15 0.001012566875439546 0.0 0.0 10.061784989708638 0.0 16 0.001012566875439546 0.0 0.0 10.456962225732454 0.0 17 0.001012566875439546 0.0 0.0 10.889972642284055 0.0 18 0.001104618409570414 0.0 0.0 11.38677477198835 0.0 19 0.001104618409570414 0.0 0.0 11.860195812023402 0.0 20 0.001104618409570414 0.0 0.0 12.214778321495507 0.0 21 0.0011966699437012816 0.0 0.0 12.613453515816294 0.0 22 0.0011966699437012816 0.0 0.0 13.067727836752127 0.0 23 0.0011966699437012816 0.0 0.0 13.461156093627457 0.0 24 0.0011966699437012816 0.0 0.0 13.798617017751218 0.0 25 0.0011966699437012816 0.0 0.0 14.115550449763795 0.0 26 0.0011966699437012816 0.0 0.0 14.428341562740485 0.0 27 0.0011966699437012816 0.0 0.0 14.79065640107958 0.0 28 0.0011966699437012816 0.0 0.0 15.106301111614327 0.0 29 0.0011966699437012816 0.0 0.0 15.45563668364097 0.0 30 0.0011966699437012816 0.0 0.0 15.934304661121482 0.0 31 0.0011966699437012816 0.0 0.0 16.308310044295197 0.0 32 0.0011966699437012816 0.0 0.0 16.654699967229654 0.0 33 0.0012887214778321495 0.0 0.0 17.002654766244333 0.0 34 0.0012887214778321495 0.0 0.0 17.377396561691096 0.0 35 0.0012887214778321495 0.0 0.0 17.75959453140246 0.0 36 0.0012887214778321495 0.0 0.0 18.13083836855225 0.0 37 0.0012887214778321495 0.0 0.0 18.490759867003945 0.0 38 0.0013807730119630175 0.0 0.0 18.88676556683494 0.0 39 0.0013807730119630175 0.0 0.0 19.489058754653204 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTTCG 25 3.890664E-5 45.0 23 AAACTCG 25 3.890664E-5 45.0 39 GTATACG 20 7.033116E-4 45.0 1 ACCGCTC 50 1.0822987E-9 40.5 18 CGTTTTT 3145 0.0 40.206676 1 TACGGCT 1310 0.0 39.50382 7 CTTGACG 40 3.4579898E-7 39.375 1 GATCGAT 35 6.247974E-6 38.571426 9 TCGATAG 35 6.247974E-6 38.571426 1 TAGCGAT 30 1.1398807E-4 37.499996 12 TGCGATA 30 1.1398807E-4 37.499996 1 TATTACG 30 1.1398807E-4 37.499996 1 CGGTACC 30 1.1398807E-4 37.499996 14 ACGGCTG 1405 0.0 36.99288 8 GCCGACC 55 2.748493E-9 36.818184 14 GCGTACG 55 2.748493E-9 36.818184 1 CATACGA 230 0.0 36.195652 18 TAATACG 25 0.002107058 36.0 22 GTCGACT 25 0.002107058 36.0 9 CGAAACG 25 0.002107058 36.0 37 >>END_MODULE