##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935572.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 668995 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.183748757464556 33.0 31.0 34.0 30.0 34.0 2 32.200272049865845 33.0 31.0 34.0 30.0 34.0 3 32.1976905656993 34.0 31.0 34.0 30.0 34.0 4 35.84438000284008 37.0 35.0 37.0 35.0 37.0 5 35.92433276780843 37.0 35.0 37.0 35.0 37.0 6 35.86892278716582 37.0 35.0 37.0 35.0 37.0 7 36.12958093857204 37.0 35.0 37.0 35.0 37.0 8 35.94300555310578 37.0 35.0 37.0 35.0 37.0 9 37.773645542941274 39.0 38.0 39.0 35.0 39.0 10 37.4140060837525 39.0 37.0 39.0 34.0 39.0 11 37.39694766029641 39.0 37.0 39.0 35.0 39.0 12 37.31870940739467 39.0 37.0 39.0 35.0 39.0 13 37.29049843421849 39.0 37.0 39.0 34.0 39.0 14 38.43961913018782 40.0 38.0 41.0 34.0 41.0 15 38.55076196384128 40.0 38.0 41.0 35.0 41.0 16 38.328347745498846 40.0 37.0 41.0 34.0 41.0 17 38.37949162549795 40.0 38.0 41.0 34.0 41.0 18 38.28752681260697 40.0 37.0 41.0 34.0 41.0 19 38.16470078251706 40.0 37.0 41.0 34.0 41.0 20 38.31181996875911 40.0 37.0 41.0 34.0 41.0 21 38.22727524122004 40.0 37.0 41.0 34.0 41.0 22 38.325512148820245 40.0 37.0 41.0 34.0 41.0 23 38.34414905941001 40.0 37.0 41.0 34.0 41.0 24 38.28039372491573 40.0 37.0 41.0 34.0 41.0 25 38.027645946531734 40.0 36.0 41.0 34.0 41.0 26 38.11721014357357 40.0 37.0 41.0 34.0 41.0 27 38.12734026412753 40.0 37.0 41.0 34.0 41.0 28 38.017690715177245 40.0 36.0 41.0 34.0 41.0 29 37.99891030575714 40.0 36.0 41.0 34.0 41.0 30 37.830581693435676 40.0 36.0 41.0 33.0 41.0 31 37.78582052182752 40.0 36.0 41.0 33.0 41.0 32 37.72260031838803 40.0 36.0 41.0 33.0 41.0 33 37.658384591813096 40.0 36.0 41.0 33.0 41.0 34 37.55426124261018 40.0 36.0 41.0 33.0 41.0 35 37.45970448209628 40.0 36.0 41.0 33.0 41.0 36 37.37342282079836 40.0 35.0 41.0 33.0 41.0 37 37.35996681589548 40.0 35.0 41.0 33.0 41.0 38 37.23684481946801 40.0 35.0 41.0 33.0 41.0 39 37.17363208992593 40.0 35.0 41.0 32.0 41.0 40 37.09158962324083 40.0 35.0 41.0 32.0 41.0 41 36.959935425526346 39.0 35.0 41.0 32.0 41.0 42 36.95695633001741 39.0 35.0 41.0 32.0 41.0 43 36.898854251526544 39.0 35.0 41.0 32.0 41.0 44 36.78640946494368 39.0 35.0 41.0 31.0 41.0 45 36.756960814355864 39.0 35.0 41.0 31.0 41.0 46 36.6153155105793 39.0 35.0 41.0 31.0 41.0 47 36.56817315525527 39.0 35.0 41.0 31.0 41.0 48 36.480670259120025 39.0 35.0 41.0 31.0 41.0 49 36.43286422170569 39.0 35.0 41.0 31.0 41.0 50 36.312908168222485 39.0 35.0 41.0 31.0 41.0 51 35.19730042825432 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 16.0 10 15.0 11 15.0 12 13.0 13 20.0 14 30.0 15 27.0 16 51.0 17 71.0 18 171.0 19 261.0 20 465.0 21 741.0 22 1164.0 23 1678.0 24 2443.0 25 3567.0 26 4954.0 27 6102.0 28 6648.0 29 7210.0 30 8469.0 31 10888.0 32 14116.0 33 20127.0 34 38683.0 35 52659.0 36 44825.0 37 68111.0 38 127903.0 39 247381.0 40 163.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.09419352909962 20.582216608494832 23.25548023527829 13.068109627127258 2 32.70622351437604 24.58030329075703 24.578659033326108 18.13481416154082 3 32.33716246010807 23.571775573808473 27.146839662478794 16.94422230360466 4 28.53145389726381 25.13426856702965 27.050575863795697 19.28370167191085 5 26.307222027070452 29.135643764153695 25.010799781762195 19.546334427013655 6 25.707367020680273 34.297416273664226 24.823503912585295 15.171712793070203 7 79.01807935784274 6.043542926329793 10.113229545811254 4.825148170016218 8 80.06427551775424 6.170300226459092 8.997675617904468 4.767748637882196 9 73.52252258985493 8.116503112878274 11.390219657844975 6.97075463942182 10 39.11583793600849 28.12218327491237 18.47861344255189 14.283365346527255 11 30.597986532036863 25.27208723533061 25.68644010792308 18.44348612470945 12 28.40051121458307 22.30838795506693 29.449397977563358 19.841702852786643 13 25.044581798070244 23.70525938160973 31.080800304935014 20.16935851538502 14 20.255607291534318 27.54325518127938 30.23266242647553 21.96847510071077 15 19.935126570452695 26.224859677576067 33.8619870103663 19.978026741604946 16 23.38986091076914 25.497350503366988 31.190816074858557 19.921972511005315 17 22.50121450832966 25.031577216571126 29.409487365376425 23.057720909722793 18 23.46220823772973 25.690326534577984 29.66270300973849 21.184762217953796 19 24.45952510855836 27.03114373052116 27.50723099574735 21.002100165173132 20 26.329643719310308 26.12530736403112 27.633539862031853 19.911509054626716 21 25.0003363253836 26.81978191167348 28.435339576528975 19.74454218641395 22 22.627822330510693 25.725603330368685 28.646701395376645 22.999872943743974 23 22.80301048587807 26.658196249598276 28.648943564600632 21.88984969992302 24 23.006001539622865 24.625146675236735 29.80605236212528 22.56279942301512 25 22.084918422409732 27.33219231832824 27.574197116570375 23.00869214269165 26 21.28924730379151 27.851478710603217 28.234441214059895 22.62483277154538 27 22.000164425743094 27.287199455900268 28.886165068498272 21.82647104985837 28 19.87922181780133 28.07165972839857 30.105606170449704 21.9435122833504 29 22.387760745596005 27.265076719556948 28.073005029932958 22.27415750491409 30 22.499869206795267 26.502290749557172 29.432058535564543 21.56578150808302 31 22.721246048176745 26.862682082825728 28.172258387581373 22.243813481416154 32 23.475511775125373 26.99003729474809 28.00379673988595 21.530654190240583 33 23.657426438164713 25.941897921509128 28.026367910074068 22.374307730252095 34 21.550385279411653 25.823212430586178 30.05044880753967 22.5759534824625 35 21.013012055396526 26.18883549204404 28.970769587216644 23.82738286534279 36 21.410623397783244 28.440870260614805 27.89647157303119 22.252034768570766 37 21.09911135359756 27.17778159776979 29.124283440085502 22.59882360854715 38 21.508381975949 27.029349995141967 27.425616035994288 24.036651992914745 39 23.094940918840948 24.92111301280279 27.762987765229934 24.22095830312633 40 22.88372857794154 24.5747726066712 29.66031136256624 22.881187452821024 41 19.740207325914245 26.377327184807058 28.92846732785746 24.953998161421236 42 20.619885051457786 26.460885357887577 28.501109873765873 24.418119716888768 43 21.640968916060658 25.436811934319394 28.824430675864544 24.09778847375541 44 22.159059484749513 25.4507133835081 28.519196705506022 23.87103042623637 45 21.619892525355198 25.165509458217176 27.76029716216115 25.454300854266478 46 21.525721417947818 26.726208716059162 27.842958467552076 23.905111398440944 47 20.898810902921547 25.49361355466035 30.556581140367268 23.050994402050836 48 21.101353522821544 24.67656708944013 29.314867824124246 24.90721156361408 49 20.972354053468262 24.6814998617329 30.059417484435606 24.28672860036323 50 20.02107639070546 24.2663995993991 29.997533613853616 25.714990396041827 51 19.805977623151144 24.409449995889357 28.278238252901737 27.50633412805776 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 321.0 1 739.0 2 1157.0 3 3285.5 4 5414.0 5 3608.0 6 1802.0 7 1736.0 8 1670.0 9 1676.5 10 1683.0 11 1768.5 12 1854.0 13 1815.0 14 1776.0 15 1744.0 16 1712.0 17 1720.0 18 1728.0 19 2067.5 20 2407.0 21 2444.5 22 2482.0 23 2727.0 24 2972.0 25 3862.0 26 5527.0 27 6302.0 28 7538.5 29 8775.0 30 10265.5 31 11756.0 32 13816.0 33 15876.0 34 17345.0 35 18814.0 36 20180.0 37 21546.0 38 22948.0 39 24350.0 40 27224.5 41 30099.0 42 33339.0 43 36579.0 44 40155.0 45 43731.0 46 50996.5 47 58262.0 48 59541.0 49 60820.0 50 59056.0 51 57292.0 52 51287.5 53 45283.0 54 40862.5 55 36442.0 56 35498.5 57 34555.0 58 32531.5 59 30508.0 60 29454.0 61 28400.0 62 26610.5 63 24821.0 64 20015.5 65 15210.0 66 12557.0 67 9904.0 68 8216.0 69 6528.0 70 5534.0 71 4540.0 72 3637.0 73 2734.0 74 2244.0 75 1498.0 76 1242.0 77 910.5 78 579.0 79 404.0 80 229.0 81 175.5 82 122.0 83 109.0 84 96.0 85 79.5 86 63.0 87 43.0 88 23.0 89 21.0 90 19.0 91 13.5 92 8.0 93 5.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 668995.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.212812958444278 #Duplication Level Percentage of deduplicated Percentage of total 1 73.24672325631812 22.1298954956207 2 9.287947363513911 5.61230032923443 3 3.298965999197097 2.990131280700274 4 1.779676934682728 2.1507618541610687 5 1.1817372706336855 1.7851803561838995 6 0.9213606296372381 1.67021378223026 7 0.7940166675682833 1.6792633944189443 8 0.6748653890758894 1.6311665417822057 9 0.5930744150880717 1.6126601736145192 >10 8.028291762880825 51.5235278813549 >50 0.1396622815029258 2.738829505121232 >100 0.04970187953816205 2.818866575466409 >500 9.94037590763241E-4 0.2362069637336811 >1k 0.0029821127722897234 1.4209958663775106 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3180 0.4753398754848691 No Hit GCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCTGC 1480 0.2212273634332095 TruSeq Adapter, Index 22 (95% over 23bp) GAATCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTC 1291 0.1929760312109956 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGC 1246 0.1862495235390399 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCG 1191 0.17802823638442739 No Hit CCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCTGC 1075 0.16068879438560826 TruSeq Adapter, Index 22 (95% over 23bp) CTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCTGCT 824 0.12316982937092207 TruSeq Adapter, Index 20 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCC 749 0.1119589832509959 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4947794826568211E-4 0.0 0.0 0.1295973811463464 0.0 2 1.4947794826568211E-4 0.0 0.0 0.6597956636447209 0.0 3 1.4947794826568211E-4 0.0 0.0 0.9560609571073028 0.0 4 1.4947794826568211E-4 0.0 0.0 1.3668263589413971 0.0 5 1.4947794826568211E-4 0.0 0.0 2.4814834191585886 0.0 6 1.4947794826568211E-4 0.0 0.0 3.250547462985523 0.0 7 1.4947794826568211E-4 0.0 0.0 3.907054611768399 0.0 8 1.4947794826568211E-4 0.0 0.0 4.798541095224927 0.0 9 1.4947794826568211E-4 0.0 0.0 5.1835962899573245 0.0 10 1.4947794826568211E-4 0.0 0.0 6.1126017384285385 0.0 11 2.9895589653136423E-4 0.0 0.0 7.161637979357096 0.0 12 2.9895589653136423E-4 0.0 0.0 8.109627127258051 0.0 13 2.9895589653136423E-4 0.0 0.0 8.469570026681813 0.0 14 2.9895589653136423E-4 0.0 0.0 8.620393276481886 0.0 15 2.9895589653136423E-4 0.0 0.0 8.912622665341296 0.0 16 2.9895589653136423E-4 0.0 0.0 9.442073558098341 0.0 17 2.9895589653136423E-4 0.0 0.0 10.072422065934722 0.0 18 2.9895589653136423E-4 0.0 0.0 10.765401834094424 0.0 19 4.484338447970463E-4 0.0 0.0 11.21249037735708 0.0 20 7.473897413284105E-4 0.0 0.0 11.651656589361654 0.0 21 7.473897413284105E-4 0.0 0.0 12.163020650378552 0.0 22 7.473897413284105E-4 0.0 0.0 12.728495728667628 0.0 23 7.473897413284105E-4 0.0 0.0 13.272894416251242 0.0 24 7.473897413284105E-4 0.0 0.0 13.71370488568674 0.0 25 7.473897413284105E-4 0.0 0.0 14.132093662882383 0.0 26 7.473897413284105E-4 0.0 0.0 14.514757210442529 0.0 27 7.473897413284105E-4 0.0 0.0 14.91042533950179 0.0 28 7.473897413284105E-4 0.0 0.0 15.308933549578098 0.0 29 7.473897413284105E-4 0.0 0.0 15.708637583240533 0.0 30 0.0010463456378597747 0.0 0.0 16.20101794482769 0.0 31 0.001195823586125457 0.0 0.0 16.648704399883407 0.0 32 0.001195823586125457 0.0 0.0 17.066345787337724 0.0 33 0.001195823586125457 0.0 0.0 17.503419308066576 0.0 34 0.001195823586125457 0.0 0.0 17.908803503763107 0.0 35 0.001195823586125457 0.0 0.0 18.341990597837054 0.0 36 0.001195823586125457 0.0 0.0 18.76620901501506 0.0 37 0.001345301534391139 0.0 0.0 19.181010321452327 0.0 38 0.001345301534391139 0.0 0.0 19.620176533456902 0.0 39 0.001345301534391139 0.0 0.0 20.069656723891807 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATACGT 20 7.031169E-4 45.000004 9 CGACGTA 20 7.031169E-4 45.000004 33 CGCATCG 20 7.031169E-4 45.000004 21 CGCGACT 20 7.031169E-4 45.000004 23 ATCGTAG 20 7.031169E-4 45.000004 1 TTGCGTG 20 7.031169E-4 45.000004 1 CCGAATA 20 7.031169E-4 45.000004 39 CCGCGAC 20 7.031169E-4 45.000004 22 CGACTCG 20 7.031169E-4 45.000004 25 CTCCGAC 25 3.889051E-5 45.0 20 GCCGATA 25 3.889051E-5 45.0 9 AAGTCGG 25 3.889051E-5 45.0 2 GTTCGTA 30 2.1641372E-6 44.999996 30 AACACGT 155 0.0 42.096775 41 GCGAGAC 145 0.0 41.89655 21 GCTACGA 65 0.0 41.53846 10 GTCAAGC 165 0.0 40.909092 16 ACGGGCC 50 1.0804797E-9 40.5 5 TTACGCG 45 1.9263098E-8 40.0 1 TGCACGG 90 0.0 40.0 2 >>END_MODULE