##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935571.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 608390 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.20625092457141 33.0 31.0 34.0 30.0 34.0 2 32.21419155475928 34.0 31.0 34.0 30.0 34.0 3 32.228171074475256 34.0 31.0 34.0 30.0 34.0 4 35.86571278291885 37.0 35.0 37.0 35.0 37.0 5 35.938069330528116 37.0 35.0 37.0 35.0 37.0 6 35.874605105277865 37.0 35.0 37.0 35.0 37.0 7 36.111648777922056 37.0 35.0 37.0 35.0 37.0 8 35.90577261296208 37.0 35.0 37.0 35.0 37.0 9 37.73970150725686 39.0 38.0 39.0 35.0 39.0 10 37.40998208386068 39.0 37.0 39.0 34.0 39.0 11 37.43225398182087 39.0 37.0 39.0 35.0 39.0 12 37.31260375745821 39.0 37.0 39.0 35.0 39.0 13 37.25031640888246 39.0 37.0 39.0 34.0 39.0 14 38.41332369039596 40.0 38.0 41.0 34.0 41.0 15 38.538953631716495 40.0 38.0 41.0 34.0 41.0 16 38.32076628478443 40.0 37.0 41.0 34.0 41.0 17 38.380277453607064 40.0 37.0 41.0 34.0 41.0 18 38.297508177320466 40.0 37.0 41.0 34.0 41.0 19 38.160663390259536 40.0 37.0 41.0 34.0 41.0 20 38.31255280330051 40.0 37.0 41.0 34.0 41.0 21 38.23130228964973 40.0 37.0 41.0 34.0 41.0 22 38.292935452587976 40.0 37.0 41.0 34.0 41.0 23 38.330529758871776 40.0 37.0 41.0 34.0 41.0 24 38.27923535889808 40.0 37.0 41.0 34.0 41.0 25 38.00739164023077 40.0 36.0 41.0 34.0 41.0 26 38.1080244579957 40.0 37.0 41.0 34.0 41.0 27 38.10839428655961 40.0 37.0 41.0 34.0 41.0 28 37.981860319860616 40.0 36.0 41.0 34.0 41.0 29 37.964565492529466 40.0 36.0 41.0 34.0 41.0 30 37.81292591922944 40.0 36.0 41.0 33.0 41.0 31 37.785667088545175 40.0 36.0 41.0 33.0 41.0 32 37.743136803694995 40.0 36.0 41.0 33.0 41.0 33 37.70708920264962 40.0 36.0 41.0 33.0 41.0 34 37.63759101891878 40.0 36.0 41.0 33.0 41.0 35 37.55952431828268 40.0 36.0 41.0 33.0 41.0 36 37.445786419895136 40.0 35.0 41.0 33.0 41.0 37 37.40241456960174 40.0 35.0 41.0 33.0 41.0 38 37.28429790101744 40.0 35.0 41.0 33.0 41.0 39 37.22285540524992 40.0 35.0 41.0 33.0 41.0 40 37.11206134223114 40.0 35.0 41.0 32.0 41.0 41 36.979935567645754 39.0 35.0 41.0 32.0 41.0 42 36.983122668025445 39.0 35.0 41.0 32.0 41.0 43 36.89920117030194 39.0 35.0 41.0 32.0 41.0 44 36.79198376041684 39.0 35.0 41.0 32.0 41.0 45 36.76177945068131 39.0 35.0 41.0 31.0 41.0 46 36.61922451059353 39.0 35.0 41.0 31.0 41.0 47 36.56986965597725 39.0 35.0 41.0 31.0 41.0 48 36.457499301434936 39.0 35.0 41.0 31.0 41.0 49 36.389381811009386 39.0 35.0 41.0 31.0 41.0 50 36.2725488584625 38.0 35.0 41.0 31.0 41.0 51 35.140667992570556 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 12.0 10 13.0 11 10.0 12 13.0 13 22.0 14 22.0 15 33.0 16 52.0 17 83.0 18 153.0 19 264.0 20 454.0 21 725.0 22 1144.0 23 1564.0 24 2285.0 25 3013.0 26 4056.0 27 5008.0 28 5623.0 29 6666.0 30 7930.0 31 9948.0 32 12840.0 33 17996.0 34 35599.0 35 50037.0 36 40784.0 37 63241.0 38 114507.0 39 224112.0 40 173.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.763868571146794 19.940827429773663 23.74200759381318 12.553296405266359 2 31.77928631305577 25.388977465112838 25.025066158220877 17.806670063610515 3 33.440556222160126 23.940728808823287 25.47559953319417 17.143115435822416 4 29.98126201942833 24.7956080803432 25.53279968441296 19.690330215815514 5 26.153782935288223 30.482913920347144 23.95174148161541 19.411561662749225 6 25.756176137017373 36.12781275168888 23.73247423527671 14.383536876017027 7 78.74603461595359 7.226121402389913 9.36751097158073 4.6603330100757745 8 79.30044872532422 7.515409523496441 8.501454659018064 4.682687092161278 9 72.48837094626802 9.630335804336035 10.815430891369022 7.065862358026924 10 39.984385016190274 26.579661072667204 18.814576176465753 14.621377734676768 11 32.06660201515476 26.87535955554825 22.528476799421423 18.529561629875573 12 28.555696181725537 24.05069116849389 28.161376748467266 19.232235901313302 13 25.206035602163084 25.941912260227813 29.051923930373608 19.80012820723549 14 20.68985354788869 29.56080803432009 27.865020792583707 21.884317625207515 15 19.926363023718338 26.535774749749336 32.730649747694734 20.807212478837588 16 22.99594010420947 25.08456746494847 31.07266720360295 20.84682522723911 17 22.816121238021665 25.323230164861354 27.636877660711058 24.223770936405923 18 24.173967356465425 25.785104949128023 28.484689097453934 21.55623859695261 19 25.488420256743204 27.037755387169415 25.89802593730995 21.575798418777428 20 26.49895626160851 25.66363681191341 27.64936964775884 20.188037278719243 21 25.828826903795267 27.12733608376206 27.043015171189534 20.000821841253146 22 23.574680714673153 25.415112016962805 27.293019280395796 23.717187987968245 23 22.898962836338534 27.066026726277553 27.775604464241688 22.259405973142226 24 22.133828629661895 25.661993129407122 29.30307861733428 22.901099623596707 25 22.378572954848043 27.731718141323825 27.205575371061325 22.68413353276681 26 21.963871858511812 28.342674928910732 26.573415079143313 23.120038133434146 27 23.09275300382978 27.8461184437614 26.845608902184452 22.215519650224362 28 21.24656881276813 28.804385344926775 28.936208681930996 21.0128371603741 29 23.301007577376353 26.24007626686829 27.897565706208187 22.561350449547167 30 22.385147684873193 26.94751721757425 27.444566807475468 23.222768290077088 31 23.935140288301913 28.646263087821954 25.150314765199955 22.26828185867618 32 24.44698302075971 28.26410690511021 25.508801919821167 21.780108154308913 33 22.301319877052546 27.784644718026264 25.82586827528395 24.088167129637238 34 21.926231529117835 28.333634675126152 27.042850802938904 22.697282992817108 35 23.19071648120449 25.853153404888314 26.801393842765332 24.154736271141868 36 22.76040040105853 28.834464734791826 26.721017768207894 21.684117095941748 37 21.800161080885616 29.24817962162429 27.770509048472196 21.1811502490179 38 22.121994115616626 28.82805437301731 26.01620670951199 23.033744801854077 39 23.206495833264846 26.033629744078635 27.62323509590888 23.136639326747645 40 22.949259521030918 26.127484015187623 28.85747628987985 22.065780173901608 41 20.60684758132119 27.096434852643863 28.637058465786748 23.659659100248195 42 22.382024688111244 26.522954026200303 27.965121057216585 23.129900228471868 43 23.027005703578297 26.117128815398015 28.067358109107644 22.78850737191604 44 22.58436200463518 27.235161656174494 26.304508621114746 23.87596771807558 45 22.4642088134256 26.577195548907774 26.247801574647838 24.71079406301879 46 22.318414175117933 27.783001035519977 26.822926083597693 23.075658705764397 47 21.940038462170648 26.33376616972666 29.081345847236147 22.64484952086655 48 21.726524104603957 26.39408931770739 28.32377258008843 23.555613997600226 49 21.919328062591433 25.503542135801048 29.996548266736795 22.580581534870724 50 21.67326879140025 25.084731833199097 29.341376419730764 23.900622955669885 51 20.739985864330446 25.956705402784397 27.16464767665478 26.13866105623038 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 283.0 1 845.5 2 1408.0 3 2149.5 4 2891.0 5 2076.5 6 1262.0 7 1224.0 8 1186.0 9 1220.0 10 1254.0 11 1256.0 12 1258.0 13 1420.0 14 1582.0 15 1477.0 16 1372.0 17 1379.5 18 1387.0 19 1513.0 20 1639.0 21 2012.5 22 2386.0 23 2722.0 24 3058.0 25 3818.0 26 5598.5 27 6619.0 28 7919.0 29 9219.0 30 10306.5 31 11394.0 32 13079.0 33 14764.0 34 15703.5 35 16643.0 36 18118.0 37 19593.0 38 20606.0 39 21619.0 40 24413.5 41 27208.0 42 29990.5 43 32773.0 44 36717.0 45 40661.0 46 47110.0 47 53559.0 48 53645.0 49 53731.0 50 51331.5 51 48932.0 52 44752.5 53 40573.0 54 36453.5 55 32334.0 56 31331.5 57 30329.0 58 29617.0 59 28905.0 60 27103.0 61 25301.0 62 23235.5 63 21170.0 64 18343.0 65 15516.0 66 13565.0 67 11614.0 68 9476.0 69 7338.0 70 6082.5 71 4827.0 72 4103.0 73 3379.0 74 2734.0 75 1844.5 76 1600.0 77 1061.0 78 522.0 79 358.5 80 195.0 81 190.5 82 186.0 83 164.5 84 143.0 85 112.5 86 82.0 87 49.5 88 17.0 89 12.0 90 7.0 91 4.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 608390.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.926674574994284 #Duplication Level Percentage of deduplicated Percentage of total 1 73.93301449418294 19.168372071390174 2 9.436158264891162 4.892964091439517 3 3.3349448340461914 2.5939208831362177 4 1.6036157526947925 1.663056950538096 5 1.053533168087623 1.365730580148528 6 0.6979866653379521 1.0857883877941517 7 0.5703956041006976 1.0351922844568242 8 0.4976198154505015 1.032130161380309 9 0.4072322570059754 0.9502360383450923 >10 7.7466392084908176 50.496729978304344 >50 0.6367227065645182 10.025700754188396 >100 0.0732231112549196 3.5386768320948176 >500 0.005093781652516146 0.8617229456771295 >1k 0.0038203362393871097 1.2897780411064008 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1529 0.2513190552112954 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 1416 0.23274544289025134 No Hit GCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGC 1301 0.21384309406794985 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGC 1265 0.20792583704531634 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCG 1165 0.19148901198244547 No Hit GAATCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTC 1137 0.18688670096484164 No Hit CCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGC 903 0.14842453031772382 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 710 0.11670145794638308 No Hit CTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGCT 695 0.11423593418695245 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 628 0.10322326139482897 No Hit GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 624 0.10256578839231414 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.931047518861257E-4 0.0 0.0 0.1208106642121008 0.0 2 4.931047518861257E-4 0.0 0.0 0.6222981968802906 0.0 3 4.931047518861257E-4 0.0 0.0 0.8653988395601505 0.0 4 4.931047518861257E-4 0.0 0.0 1.181643353769786 0.0 5 4.931047518861257E-4 0.0 0.0 2.0830388402176236 0.0 6 4.931047518861257E-4 0.0 0.0 2.6137839214977237 0.0 7 4.931047518861257E-4 0.0 0.0 3.0769736517694244 0.0 8 4.931047518861257E-4 0.0 0.0 3.815480201844212 0.0 9 4.931047518861257E-4 0.0 0.0 4.092276335902957 0.0 10 4.931047518861257E-4 0.0 0.0 4.894393398971054 0.0 11 4.931047518861257E-4 0.0 0.0 5.729219743914266 0.0 12 4.931047518861257E-4 0.0 0.0 6.557800095333586 0.0 13 4.931047518861257E-4 0.0 0.0 6.894755009122438 0.0 14 4.931047518861257E-4 0.0 0.0 7.040385279179474 0.0 15 6.574730025148343E-4 0.0 0.0 7.303210111934779 0.0 16 6.574730025148343E-4 0.0 0.0 7.746840020381663 0.0 17 6.574730025148343E-4 0.0 0.0 8.29057019346143 0.0 18 6.574730025148343E-4 0.0 0.0 8.920264961620013 0.0 19 6.574730025148343E-4 0.0 0.0 9.2642877101859 0.0 20 6.574730025148343E-4 0.0 0.0 9.620309341047683 0.0 21 6.574730025148343E-4 0.0 0.0 10.061473725735137 0.0 22 6.574730025148343E-4 0.0 0.0 10.512664573710943 0.0 23 8.218412531435428E-4 0.0 0.0 10.953500221897139 0.0 24 8.218412531435428E-4 0.0 0.0 11.334341458603856 0.0 25 8.218412531435428E-4 0.0 0.0 11.68378835944049 0.0 26 8.218412531435428E-4 0.0 0.0 11.999046664146354 0.0 27 8.218412531435428E-4 0.0 0.0 12.316277387859762 0.0 28 8.218412531435428E-4 0.0 0.0 12.64994493663604 0.0 29 8.218412531435428E-4 0.0 0.0 13.007774618254738 0.0 30 8.218412531435428E-4 0.0 0.0 13.442035536415785 0.0 31 8.218412531435428E-4 0.0 0.0 13.845888328210522 0.0 32 8.218412531435428E-4 0.0 0.0 14.220976676145236 0.0 33 8.218412531435428E-4 0.0 0.0 14.61250184914282 0.0 34 8.218412531435428E-4 0.0 0.0 14.964414273738885 0.0 35 8.218412531435428E-4 0.0 0.0 15.361692335508474 0.0 36 8.218412531435428E-4 0.0 0.0 15.72872663916238 0.0 37 8.218412531435428E-4 0.0 0.0 16.089843685793653 0.0 38 8.218412531435428E-4 0.0 0.0 16.46049409096139 0.0 39 8.218412531435428E-4 0.0 0.0 16.83706175315176 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGGCGTA 30 2.1638098E-6 45.000004 7 ACTACGG 45 3.8380676E-10 45.000004 2 GCGCGTA 20 7.0306653E-4 45.0 22 CGTTGAT 25 3.8886334E-5 45.0 25 ACGTGCG 25 3.8886334E-5 45.0 1 CGAATCG 20 7.0306653E-4 45.0 32 GCGATAC 20 7.0306653E-4 45.0 9 TCGACGG 20 7.0306653E-4 45.0 2 AATCGTC 20 7.0306653E-4 45.0 34 CTTACCG 20 7.0306653E-4 45.0 10 TCGTGTA 155 0.0 43.548386 17 TATGGGT 70 0.0 41.785713 4 CGTAAGG 70 0.0 41.785713 2 CGTATGG 65 0.0 41.53846 2 CCTCGTG 170 0.0 41.02941 15 CGGGTAC 55 6.002665E-11 40.909092 6 TTCGAAT 55 6.002665E-11 40.909092 9 TAGGGCG 140 0.0 40.17857 5 AGTACGG 85 0.0 39.705883 2 ACGTATG 40 3.454643E-7 39.375 1 >>END_MODULE