##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935568.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 511441 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.25990681232048 33.0 31.0 34.0 30.0 34.0 2 32.284187227852286 34.0 31.0 34.0 30.0 34.0 3 32.28118590414144 34.0 31.0 34.0 30.0 34.0 4 35.91787126960881 37.0 35.0 37.0 35.0 37.0 5 35.97289227887479 37.0 35.0 37.0 35.0 37.0 6 35.912742623293795 37.0 35.0 37.0 35.0 37.0 7 36.15003294612673 37.0 35.0 37.0 35.0 37.0 8 35.99608752524729 37.0 35.0 37.0 35.0 37.0 9 37.84035108644008 39.0 38.0 39.0 35.0 39.0 10 37.49261009578817 39.0 37.0 39.0 35.0 39.0 11 37.40356756693343 39.0 37.0 39.0 35.0 39.0 12 37.2555622251638 39.0 37.0 39.0 35.0 39.0 13 37.22949079170422 39.0 37.0 39.0 34.0 39.0 14 38.40444743381934 40.0 38.0 41.0 34.0 41.0 15 38.50000293288962 40.0 38.0 41.0 34.0 41.0 16 38.30434204531901 40.0 37.0 41.0 34.0 41.0 17 38.3161537694475 40.0 37.0 41.0 34.0 41.0 18 38.23264267041555 40.0 37.0 41.0 34.0 41.0 19 38.087419663265166 40.0 37.0 41.0 34.0 41.0 20 38.20767791397248 40.0 37.0 41.0 34.0 41.0 21 38.13152445736654 40.0 36.0 41.0 34.0 41.0 22 38.21892261277449 40.0 36.0 41.0 34.0 41.0 23 38.22943213391183 40.0 36.0 41.0 34.0 41.0 24 38.18754264910322 40.0 36.0 41.0 34.0 41.0 25 37.942761726181516 40.0 36.0 41.0 34.0 41.0 26 38.00598505008398 40.0 36.0 41.0 34.0 41.0 27 38.008126059506374 40.0 36.0 41.0 34.0 41.0 28 37.88738485964168 40.0 36.0 41.0 34.0 41.0 29 37.85180695329471 40.0 36.0 41.0 34.0 41.0 30 37.693211924738144 40.0 35.0 41.0 33.0 41.0 31 37.65743262663729 40.0 35.0 41.0 33.0 41.0 32 37.58859770726242 40.0 35.0 41.0 33.0 41.0 33 37.47932215055109 40.0 35.0 41.0 33.0 41.0 34 37.3426846889475 40.0 35.0 41.0 33.0 41.0 35 37.24792693585379 40.0 35.0 41.0 33.0 41.0 36 37.13905220739049 40.0 35.0 41.0 33.0 41.0 37 37.109029193983275 40.0 35.0 41.0 33.0 41.0 38 36.97283557634214 40.0 35.0 41.0 32.0 41.0 39 36.90717404353581 39.0 35.0 41.0 32.0 41.0 40 36.810760185436834 39.0 35.0 41.0 31.0 41.0 41 36.6714283759026 39.0 35.0 41.0 31.0 41.0 42 36.66271769373203 39.0 35.0 41.0 31.0 41.0 43 36.57801975203396 39.0 35.0 41.0 31.0 41.0 44 36.46601074219705 39.0 35.0 41.0 31.0 41.0 45 36.43257775579197 39.0 35.0 41.0 31.0 41.0 46 36.32046511718849 39.0 35.0 41.0 31.0 41.0 47 36.25487397373304 38.0 35.0 41.0 31.0 41.0 48 36.15703473127888 38.0 35.0 41.0 31.0 41.0 49 36.09202429996813 38.0 35.0 40.0 31.0 41.0 50 35.96957224782526 38.0 35.0 40.0 30.0 41.0 51 34.90841563347483 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 10.0 10 15.0 11 12.0 12 10.0 13 21.0 14 25.0 15 25.0 16 45.0 17 84.0 18 124.0 19 258.0 20 485.0 21 785.0 22 1144.0 23 1550.0 24 2097.0 25 2972.0 26 4034.0 27 4728.0 28 5257.0 29 5685.0 30 6786.0 31 8353.0 32 11016.0 33 15385.0 34 32195.0 35 44378.0 36 35583.0 37 52478.0 38 93674.0 39 182077.0 40 142.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.69935339560184 19.75614000441889 23.867269147369882 13.677237452609392 2 32.38965980435671 24.729538695568014 24.936796228695002 17.944005271380277 3 31.679900516384095 24.13416210276454 27.2549521841229 16.93098519672846 4 28.611706922206082 25.109250138334627 27.38673669103572 18.89230624842357 5 26.300198849916217 29.21334034619829 25.084418339554322 19.402042464331174 6 26.064785576439903 34.82024319520727 24.151563914508223 14.963407313844607 7 80.44564280141795 5.766843096271124 9.680686530802184 4.106827571508737 8 82.64706974998094 5.553524257930045 8.074831701017322 3.724574291071697 9 76.93986207597749 6.990444645618947 9.626134783875363 6.443558494528205 10 44.28174510842893 24.944812793655576 16.602306033345 14.171136064570497 11 33.42164589854939 25.999870952856728 22.844863825934954 17.73361932265892 12 30.6080271233632 22.711319585250305 26.962836377998634 19.71781691338786 13 26.12187916103715 23.097287859205657 28.908124299772602 21.872708679984594 14 21.76164992638447 26.32346644089934 29.484339347060562 22.43054428565563 15 21.47285806182922 25.232235976388285 32.81199590959661 20.482910052185883 16 25.55700462027878 24.468315993438146 29.70098212697066 20.273697259312414 17 24.35491092814225 24.89475814414566 28.284787492594454 22.465543435117638 18 25.96917337483698 24.936405176745705 27.42584188596534 21.668579562451974 19 26.186989310594967 27.159731034469274 25.358350230036308 21.29492942489945 20 28.897565897141607 25.974061524203186 26.06165716084553 19.06671541780968 21 26.6932060589589 27.44461237953156 26.271456531642944 19.590725029866594 22 25.21014154125305 24.30211891498726 28.10998727125905 22.37775227250064 23 25.135059566988176 25.95763734233274 27.729493724593844 21.17780936608524 24 25.699347529822596 23.512780555332874 28.511011045262308 22.27686086958222 25 24.269661603195676 25.871410387512928 26.316818557761305 23.542109451530088 26 22.667717292903774 26.09411447263712 27.578156620216216 23.660011614242894 27 22.80654073490393 26.66896083810254 27.50502990569782 23.01946852129571 28 21.122475515259826 28.321741901802945 28.29436826535221 22.261414317585018 29 23.842437348589574 26.253468141975322 28.271296200343738 21.63279830909137 30 23.538589983986423 25.26039171673761 29.374258223333676 21.82676007594229 31 25.216984950365735 26.16078882999212 26.39150948007688 22.230716739565267 32 27.38712774298502 26.06048400499764 26.52231635711646 20.03007189490088 33 25.888421147307316 26.456619629634698 26.302154109662695 21.35280511339529 34 23.46448563959479 27.067442774435367 28.349506590202978 21.11856499576686 35 23.8445881343107 26.75968489033926 27.46533813284426 21.93038884250578 36 23.95506030998688 30.0828443554584 25.53647439294073 20.42562094161399 37 24.998973488633098 28.638885032682165 25.5139889058562 20.84815257282854 38 23.932965874851643 28.80508211113305 24.803643039959645 22.458308974055658 39 25.609210055509823 26.406564980124784 25.042771306954272 22.941453657411117 40 25.423851431543426 25.17924843725865 27.236768268480628 22.160131862717304 41 21.99315268036782 26.520556623344625 27.302856047911682 24.18343464837586 42 23.349516366501707 26.430614675006503 26.545583948099583 23.674285010392204 43 23.451385399293372 25.470973191433615 27.23637721653133 23.841264192741683 44 23.328986139163657 25.907582692822828 26.995098163815573 23.76833300419794 45 23.59138199714141 25.2717322232672 26.76359540983222 24.37329036975917 46 22.456353714309177 27.279979508877854 26.417905486654377 23.845761290158592 47 22.646404961667134 26.03193721269902 28.194845544256324 23.12681228137752 48 22.66087388379109 25.34055736634333 28.52919496090458 23.469373788960997 49 23.05896476817463 25.310641892222176 28.477185051648185 23.153208287955014 50 20.630532163045203 25.92596213443975 29.052422469062904 24.39108323345215 51 21.047980118918897 25.207599703582623 27.969404095487064 25.775016082011415 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 229.0 1 586.5 2 944.0 3 2898.0 4 4852.0 5 3114.5 6 1377.0 7 1342.5 8 1308.0 9 1313.0 10 1318.0 11 1247.5 12 1177.0 13 1158.5 14 1140.0 15 1179.0 16 1218.0 17 1206.0 18 1194.0 19 1237.5 20 1281.0 21 1631.5 22 1982.0 23 2040.0 24 2098.0 25 2664.5 26 3806.5 27 4382.0 28 5070.5 29 5759.0 30 6770.0 31 7781.0 32 9141.5 33 10502.0 34 12277.0 35 14052.0 36 14604.0 37 15156.0 38 16173.0 39 17190.0 40 19159.5 41 21129.0 42 23086.5 43 25044.0 44 27187.5 45 29331.0 46 33928.0 47 38525.0 48 38018.5 49 37512.0 50 37979.5 51 38447.0 52 35156.5 53 31866.0 54 30769.0 55 29672.0 56 29875.5 57 30079.0 58 29853.0 59 29627.0 60 29178.5 61 28730.0 62 26823.0 63 24916.0 64 21099.5 65 17283.0 66 13796.0 67 10309.0 68 8790.0 69 7271.0 70 6049.0 71 4827.0 72 4171.0 73 3515.0 74 2909.5 75 1864.5 76 1425.0 77 1107.5 78 790.0 79 545.5 80 301.0 81 265.5 82 230.0 83 152.0 84 74.0 85 56.0 86 38.0 87 25.0 88 12.0 89 11.0 90 10.0 91 5.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 511441.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.12194233863575 #Duplication Level Percentage of deduplicated Percentage of total 1 71.16423489776534 20.01276510368087 2 7.329685241008008 4.122499714159534 3 2.951433240627719 2.490001062277967 4 1.9511719776618566 2.194829833942745 5 1.5106811929920032 2.1241644700691293 6 1.3586613632855227 2.292491790962863 7 1.1817329428141268 2.326283797423965 8 1.0254285459506138 2.3069633953291415 9 0.96774226426598 2.4493312938913823 >10 10.441959666527193 54.95339774506953 >50 0.08097122252260108 1.5122872641291472 >100 0.03210927789689354 1.6758043060579608 >500 0.0013960555607345014 0.2180881555617189 >1k 0.0027921111214690027 1.3210920674440758 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2804 0.5482548329132784 No Hit GAATCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCGTCTTC 1519 0.2970039554904671 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGC 1274 0.24910009170168212 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCG 1133 0.2215309292762997 No Hit GCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCGTCTTCTGC 600 0.11731558478886128 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.9105194929620426E-4 0.0 0.0 0.07175803269585349 0.0 2 3.9105194929620426E-4 0.0 0.0 0.3570304297074345 0.0 3 3.9105194929620426E-4 0.0 0.0 0.5324172289667821 0.0 4 3.9105194929620426E-4 0.0 0.0 0.763919982950135 0.0 5 3.9105194929620426E-4 0.0 0.0 1.4861929333002242 0.0 6 3.9105194929620426E-4 0.0 0.0 1.9804825972106264 0.0 7 3.9105194929620426E-4 0.0 0.0 2.357456676332167 0.0 8 3.9105194929620426E-4 0.0 0.0 2.8669973662651214 0.0 9 5.865779239443064E-4 0.0 0.0 3.118639295637229 0.0 10 5.865779239443064E-4 0.0 0.0 3.7703273691393533 0.0 11 5.865779239443064E-4 0.0 0.0 4.29296829937373 0.0 12 5.865779239443064E-4 0.0 0.0 4.941136905332189 0.0 13 5.865779239443064E-4 0.0 0.0 5.1720530813915975 0.0 14 5.865779239443064E-4 0.0 0.0 5.292692607749476 0.0 15 5.865779239443064E-4 0.0 0.0 5.469252562856712 0.0 16 5.865779239443064E-4 0.0 0.0 5.728520005240096 0.0 17 5.865779239443064E-4 0.0 0.0 6.022591071110842 0.0 18 5.865779239443064E-4 0.0 0.0 6.351661286443598 0.0 19 9.776298732405105E-4 0.0 0.0 6.603498741790353 0.0 20 9.776298732405105E-4 0.0 0.0 6.8150578463596 0.0 21 9.776298732405105E-4 0.0 0.0 7.0696326653514285 0.0 22 0.0011731558478886128 0.0 0.0 7.376999497498245 0.0 23 0.0011731558478886128 0.0 0.0 7.6470208684872745 0.0 24 0.0013686818225367148 0.0 0.0 7.888690973152328 0.0 25 0.0013686818225367148 0.0 0.0 8.094970876406077 0.0 26 0.0013686818225367148 0.0 0.0 8.297535786141509 0.0 27 0.0013686818225367148 0.0 0.0 8.512223306305126 0.0 28 0.0013686818225367148 0.0 0.0 8.733754235581426 0.0 29 0.0013686818225367148 0.0 0.0 8.942380450530951 0.0 30 0.001564207797184817 0.0 0.0 9.235278360553808 0.0 31 0.001564207797184817 0.0 0.0 9.470105056106178 0.0 32 0.001564207797184817 0.0 0.0 9.722529089376879 0.0 33 0.001564207797184817 0.0 0.0 9.978668116165892 0.0 34 0.001564207797184817 0.0 0.0 10.217600857185873 0.0 35 0.001564207797184817 0.0 0.0 10.475108565797424 0.0 36 0.001564207797184817 0.0 0.0 10.74317467703997 0.0 37 0.001564207797184817 0.0 0.0 11.009872106459982 0.0 38 0.001564207797184817 0.0 0.0 11.321540510049058 0.0 39 0.001564207797184817 0.0 0.0 11.64376731626913 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCGTG 20 7.029611E-4 45.0 37 CGGTCTA 40 6.8030204E-9 45.0 31 TAGGACG 20 7.029611E-4 45.0 1 TATCGAG 35 1.2101555E-7 45.0 1 GCGATAT 30 2.1631295E-6 44.999996 9 CGTAAGG 135 0.0 43.333332 2 CGTTTTT 1135 0.0 40.837 1 TTACGGG 130 0.0 39.80769 3 CGTAAGC 30 1.1390362E-4 37.499996 34 CTAGGCG 30 1.1390362E-4 37.499996 1 TAACGGG 115 0.0 37.173916 3 ACGTTGG 55 2.743036E-9 36.81818 2 GCGTAAG 55 2.743036E-9 36.81818 1 ATGACGG 105 0.0 36.42857 2 ATGGGAC 155 0.0 36.29032 5 TTTAGCG 25 0.0021060172 36.0 1 AAGTACG 25 0.0021060172 36.0 1 TCACCTA 25 0.0021060172 36.0 44 TACGGGA 75 1.8189894E-12 36.0 4 ACGGGCC 25 0.0021060172 36.0 5 >>END_MODULE