##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935567.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 260640 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.90608885819521 33.0 31.0 34.0 30.0 34.0 2 31.8722605893186 33.0 31.0 34.0 30.0 34.0 3 31.847847605893186 33.0 31.0 34.0 30.0 34.0 4 35.56525475751995 37.0 35.0 37.0 33.0 37.0 5 35.65920042971148 37.0 35.0 37.0 33.0 37.0 6 35.6220265500307 37.0 35.0 37.0 33.0 37.0 7 35.866194751381215 37.0 35.0 37.0 35.0 37.0 8 35.72598219766728 37.0 35.0 37.0 35.0 37.0 9 37.45622314303254 39.0 37.0 39.0 35.0 39.0 10 37.043335635359114 39.0 37.0 39.0 33.0 39.0 11 37.09508517495396 39.0 37.0 39.0 34.0 39.0 12 36.86033993247391 39.0 35.0 39.0 33.0 39.0 13 36.7137277470841 39.0 35.0 39.0 33.0 39.0 14 37.69187001227747 40.0 36.0 41.0 33.0 41.0 15 37.90956108041743 40.0 36.0 41.0 33.0 41.0 16 37.71549263351749 39.0 36.0 41.0 33.0 41.0 17 37.761602209944755 39.0 36.0 41.0 33.0 41.0 18 37.708471454880296 39.0 36.0 41.0 33.0 41.0 19 37.621815531000614 39.0 36.0 41.0 33.0 41.0 20 37.72618937998772 39.0 35.0 41.0 33.0 41.0 21 37.62998772252916 39.0 35.0 41.0 33.0 41.0 22 37.6970879373849 39.0 35.0 41.0 33.0 41.0 23 37.778974831184776 39.0 35.0 41.0 34.0 41.0 24 37.761310620012274 39.0 35.0 41.0 34.0 41.0 25 37.41827424800491 39.0 35.0 41.0 33.0 41.0 26 37.595250153468385 39.0 35.0 41.0 33.0 41.0 27 37.56173265807244 39.0 35.0 41.0 33.0 41.0 28 37.20038367096378 39.0 35.0 41.0 32.0 41.0 29 36.967744782074895 39.0 35.0 41.0 31.0 41.0 30 36.8451197053407 39.0 35.0 41.0 31.0 41.0 31 36.861088090853286 39.0 35.0 41.0 31.0 41.0 32 36.98012968078576 39.0 35.0 41.0 32.0 41.0 33 36.917065684469 39.0 35.0 41.0 31.0 41.0 34 36.847410220994476 39.0 35.0 41.0 31.0 41.0 35 36.83582719459791 39.0 35.0 41.0 31.0 41.0 36 36.699221147943526 39.0 35.0 41.0 31.0 41.0 37 36.67719076120319 39.0 35.0 41.0 31.0 41.0 38 36.46175567833026 39.0 35.0 41.0 30.0 41.0 39 36.37996470227133 39.0 35.0 41.0 30.0 41.0 40 36.34033532842235 39.0 35.0 41.0 30.0 41.0 41 36.12504220380602 39.0 35.0 41.0 30.0 41.0 42 36.14385742786986 39.0 35.0 41.0 30.0 41.0 43 35.953867403314916 39.0 35.0 41.0 29.0 41.0 44 35.91499002455494 38.0 35.0 40.0 29.0 41.0 45 35.95227516881523 38.0 35.0 40.0 29.0 41.0 46 35.7068792203806 38.0 35.0 40.0 28.0 41.0 47 35.73063612645795 38.0 35.0 40.0 29.0 41.0 48 35.627628146101905 38.0 35.0 40.0 28.0 41.0 49 35.39699585635359 38.0 35.0 40.0 27.0 41.0 50 35.16217004297115 38.0 34.0 40.0 26.0 41.0 51 33.900184162062615 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 7.0 10 2.0 11 7.0 12 2.0 13 4.0 14 5.0 15 15.0 16 20.0 17 30.0 18 71.0 19 139.0 20 285.0 21 520.0 22 776.0 23 1163.0 24 1608.0 25 2147.0 26 2608.0 27 3006.0 28 3426.0 29 3902.0 30 4774.0 31 5661.0 32 7324.0 33 9971.0 34 18881.0 35 26276.0 36 17519.0 37 26347.0 38 47444.0 39 76662.0 40 38.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.8994014732965 20.368707796193984 23.70817986494782 13.023710865561695 2 31.279542664211174 25.016114180478823 25.786909146715775 17.91743400859423 3 30.474984653161446 24.61671270718232 27.954266421117254 16.95403621853898 4 28.265423572744012 25.659914057704114 27.458947206875383 18.615715162676487 5 24.244935543278086 29.125997544505832 26.350521792510744 20.278545119705342 6 24.218845917740943 35.021869244935544 25.836786372007364 14.922498465316144 7 78.29765193370166 5.9369244935543275 10.504910988336402 5.2605125844076115 8 78.21516267648865 6.341697360343769 9.54573357888275 5.897406384284838 9 72.80885512584408 8.110036832412524 11.95633824432167 7.124769797421732 10 40.45234806629834 26.423802946593 18.958717004297114 14.165131982811541 11 32.00851749539595 27.27171577655003 22.95158072437078 17.768186003683244 12 28.32105586249233 21.58034069981584 31.79135972989564 18.307243707796196 13 26.41306015960712 26.920656844689994 30.24938612645795 16.416896869244933 14 18.535911602209946 32.24946286065071 30.556322897483117 18.65830263965623 15 17.364564149785146 24.24033149171271 40.29274094536526 18.102363413136892 16 20.15231737262124 25.865945365254756 32.38873542050338 21.593001841620627 17 20.021101903007978 23.11732658072437 27.394490484960098 29.46708103130755 18 25.54059238796808 22.94429097605893 29.85804174340086 21.65707489257213 19 27.010052179251076 24.055785758133823 26.634438305709025 22.29972375690608 20 25.017648864333946 24.964318600368323 27.253683241252304 22.764349294045427 21 24.656998158379373 27.055709023941066 28.853974831184775 19.43331798649478 22 19.94398403928791 27.3116175567833 26.903007980356048 25.841390423572747 23 18.743477593615715 26.32673419275629 28.65024554941682 26.279542664211174 24 21.592618170656845 23.05900859422959 30.083640270104357 25.264732965009205 25 19.142879066912215 26.286065070595455 28.07013505217925 26.500920810313076 26 17.252148557397177 26.695058317986497 26.868477593615715 29.184315531000614 27 20.475751995089013 25.791896869244933 27.551028238182933 26.181322897483117 28 19.592157765500307 25.804174340085943 31.23695518723143 23.366712707182323 29 19.332796193984038 23.877378759975446 32.61318293431553 24.176642111724984 30 21.994321669736035 26.482504604051567 28.28000306936771 23.24317065684469 31 21.64134438305709 31.435696746470228 24.812384898710864 22.11057397176182 32 23.078959484346225 28.758824432166975 25.81645181092695 22.345764272559855 33 21.639042357274402 25.307704112952734 28.85934622467772 24.19390730509515 34 21.052025782688766 27.308931860036832 27.983425414364643 23.65561694290976 35 20.033379373848987 25.906998158379373 28.016037446286063 26.043585021485573 36 21.873465316144873 25.672958870472684 28.453806015960716 23.99976979742173 37 19.38267341927563 29.688842848373238 28.236264579496623 22.692219152854513 38 20.778468385512586 27.64732965009208 26.035144260282383 25.539057704112956 39 22.324662369551874 24.72874462860651 28.898864333947206 24.047728667894415 40 25.639579496623693 23.167971147943522 27.816144874155924 23.376304481276858 41 19.582949662369554 24.04696132596685 25.634208103130756 30.73588090853284 42 22.559085328422345 23.36594536525476 26.984729895641497 27.0902394106814 43 21.419198895027623 24.56645181092695 27.021945979128297 26.99240331491713 44 19.06767955801105 24.544582565991405 28.443830570902396 27.943907305095152 45 18.85512584407612 25.166513198281155 27.622007366482503 28.35635359116022 46 22.140883977900554 26.88612645794966 27.12438612645795 23.848603437691835 47 19.03314917127072 24.401856967464703 28.990561694290978 27.574432166973605 48 19.811233885819522 23.202117863720073 29.420273173726212 27.566375076734197 49 22.264426028238184 21.3286525475752 31.57612031921424 24.830801104972373 50 20.028391651319826 22.423649478207487 31.54120626151013 26.006752608962554 51 20.115868631062 23.097759361571516 27.320058317986494 29.466313689379987 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 231.0 1 321.0 2 411.0 3 717.5 4 1024.0 5 746.0 6 468.0 7 465.5 8 463.0 9 461.0 10 459.0 11 455.0 12 451.0 13 523.0 14 595.0 15 576.5 16 558.0 17 525.5 18 493.0 19 535.0 20 577.0 21 626.0 22 675.0 23 852.5 24 1030.0 25 981.0 26 1320.5 27 1709.0 28 1907.5 29 2106.0 30 2587.0 31 3068.0 32 3589.0 33 4110.0 34 4603.0 35 5096.0 36 5848.0 37 6600.0 38 7560.0 39 8520.0 40 9733.5 41 10947.0 42 13730.5 43 16514.0 44 18340.0 45 20166.0 46 24520.5 47 28875.0 48 29225.5 49 29576.0 50 28741.5 51 27907.0 52 23780.5 53 19654.0 54 16804.0 55 13954.0 56 13546.5 57 13139.0 58 12458.5 59 11778.0 60 10865.5 61 9953.0 62 8642.0 63 7331.0 64 5927.5 65 4524.0 66 3524.5 67 2525.0 68 2001.0 69 1477.0 70 1242.0 71 1007.0 72 925.5 73 844.0 74 616.0 75 336.5 76 285.0 77 207.5 78 130.0 79 83.0 80 36.0 81 25.0 82 14.0 83 8.0 84 2.0 85 18.0 86 34.0 87 18.0 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 260640.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.538367096378146 #Duplication Level Percentage of deduplicated Percentage of total 1 76.36345053147997 28.66559238796808 2 10.375102207686018 7.789287906691221 3 3.590556009811938 4.043508287292818 4 1.6741618969746526 2.5138121546961325 5 0.9280457890433361 1.741866175567833 6 0.6674161896974652 1.5032228360957642 7 0.46913327882256745 1.2327348066298343 8 0.4118969746524938 1.2369551872314304 9 0.34035159443990187 1.1498618784530388 >10 4.976492232215863 41.92142418661756 >50 0.16557645134914145 3.9226519337016574 >100 0.02964022894521668 1.8707796193984039 >500 0.006132461161079314 1.4226519337016574 >1k 0.002044153720359771 0.9856507059545734 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 1524 0.5847145488029466 Illumina PCR Primer Index 10 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 1045 0.4009361571516268 Illumina PCR Primer Index 10 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGCT 771 0.2958103130755064 Illumina PCR Primer Index 10 (95% over 24bp) GAATGATACCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCG 655 0.25130448127685695 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGC 640 0.24554941682013504 No Hit GAATCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTC 586 0.22483118477593617 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 547 0.2098680171884592 No Hit TCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 509 0.19528852056476367 Illumina PCR Primer Index 10 (95% over 23bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCC 391 0.15001534683855125 No Hit ACTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 344 0.1319828115408226 Illumina PCR Primer Index 10 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.83670963781461E-4 0.0 0.0 0.3161448741559239 0.0 2 3.83670963781461E-4 0.0 0.0 1.732658072437078 0.0 3 3.83670963781461E-4 0.0 0.0 2.3687845303867405 0.0 4 3.83670963781461E-4 0.0 0.0 3.145718232044199 0.0 5 3.83670963781461E-4 0.0 0.0 5.082872928176796 0.0 6 3.83670963781461E-4 0.0 0.0 6.130294659300184 0.0 7 3.83670963781461E-4 0.0 0.0 7.152394106813996 0.0 8 3.83670963781461E-4 0.0 0.0 8.670963781461019 0.0 9 3.83670963781461E-4 0.0 0.0 9.168968692449356 0.0 10 3.83670963781461E-4 0.0 0.0 10.58548189073051 0.0 11 3.83670963781461E-4 0.0 0.0 12.305095150399017 0.0 12 3.83670963781461E-4 0.0 0.0 14.01818600368324 0.0 13 3.83670963781461E-4 0.0 0.0 14.859576427255986 0.0 14 3.83670963781461E-4 0.0 0.0 15.333026396562309 0.0 15 3.83670963781461E-4 0.0 0.0 15.79304788213628 0.0 16 3.83670963781461E-4 0.0 0.0 16.73073971761817 3.83670963781461E-4 17 7.67341927562922E-4 0.0 0.0 17.824201964395336 3.83670963781461E-4 18 7.67341927562922E-4 0.0 0.0 19.292510742786988 3.83670963781461E-4 19 7.67341927562922E-4 0.0 0.0 20.008824432166975 3.83670963781461E-4 20 7.67341927562922E-4 0.0 0.0 20.737031921424187 3.83670963781461E-4 21 7.67341927562922E-4 0.0 0.0 21.548496009821978 3.83670963781461E-4 22 7.67341927562922E-4 0.0 0.0 22.33732351135666 3.83670963781461E-4 23 7.67341927562922E-4 0.0 0.0 23.114640883977902 3.83670963781461E-4 24 0.0011510128913443832 0.0 0.0 23.71048189073051 3.83670963781461E-4 25 0.0011510128913443832 0.0 0.0 24.24148250460405 3.83670963781461E-4 26 0.0011510128913443832 0.0 0.0 24.773250460405155 3.83670963781461E-4 27 0.0011510128913443832 0.0 0.0 25.347989564149785 3.83670963781461E-4 28 0.0011510128913443832 0.0 0.0 25.860573971761816 3.83670963781461E-4 29 0.0011510128913443832 0.0 0.0 26.429941682013506 3.83670963781461E-4 30 0.0011510128913443832 0.0 0.0 27.08717004297115 3.83670963781461E-4 31 0.001534683855125844 0.0 0.0 27.66306015960712 3.83670963781461E-4 32 0.001534683855125844 0.0 0.0 28.171424186617557 3.83670963781461E-4 33 0.001534683855125844 0.0 0.0 28.764963167587478 3.83670963781461E-4 34 0.001534683855125844 0.0 0.0 29.409914057704114 3.83670963781461E-4 35 0.001534683855125844 0.0 0.0 30.004604051565376 3.83670963781461E-4 36 0.001534683855125844 0.0 0.0 30.507596685082873 3.83670963781461E-4 37 0.0019183548189073052 0.0 0.0 31.038597298956415 3.83670963781461E-4 38 0.0019183548189073052 0.0 0.0 31.6018262737876 3.83670963781461E-4 39 0.0019183548189073052 0.0 0.0 32.338858195211785 3.83670963781461E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGCG 25 3.8824783E-5 45.0 28 AGCCGTA 20 7.02324E-4 45.0 44 CAGCGAT 20 7.02324E-4 45.0 21 ATCTCTC 20 7.02324E-4 45.0 26 CTCACTC 20 7.02324E-4 45.0 28 GGTGTCG 20 7.02324E-4 45.0 31 TGGACGG 35 1.2070996E-7 45.0 2 GCGCGAG 25 3.8824783E-5 45.0 1 TATATCC 25 3.8824783E-5 45.0 15 GTCTACC 20 7.02324E-4 45.0 23 CGCGAGG 35 1.2070996E-7 45.0 2 TCGATGA 20 7.02324E-4 45.0 37 ACGGGCC 20 7.02324E-4 45.0 5 ATGTATG 25 3.8824783E-5 45.0 1 AACGGGC 45 3.8198777E-10 45.0 4 TACGCGG 25 3.8824783E-5 45.0 2 TAACCCA 20 7.02324E-4 45.0 21 AGGCCCA 20 7.02324E-4 45.0 44 CTACGAA 25 3.8824783E-5 45.0 28 TACGAAC 20 7.02324E-4 45.0 29 >>END_MODULE