##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935566.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 669838 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16878558696282 33.0 31.0 34.0 30.0 34.0 2 32.17425556627125 33.0 31.0 34.0 30.0 34.0 3 32.1612927304811 33.0 31.0 34.0 30.0 34.0 4 35.82368124830183 37.0 35.0 37.0 35.0 37.0 5 35.90460827841956 37.0 35.0 37.0 35.0 37.0 6 35.86104401362717 37.0 35.0 37.0 35.0 37.0 7 36.122775954783094 37.0 35.0 37.0 35.0 37.0 8 35.96678450610446 37.0 35.0 37.0 35.0 37.0 9 37.78656630409144 39.0 38.0 39.0 35.0 39.0 10 37.37746440184044 39.0 37.0 39.0 34.0 39.0 11 37.37511308704493 39.0 37.0 39.0 34.0 39.0 12 37.39433116664029 39.0 37.0 39.0 35.0 39.0 13 37.41152039746924 39.0 37.0 39.0 35.0 39.0 14 38.61420223994458 40.0 38.0 41.0 35.0 41.0 15 38.713627772685335 40.0 38.0 41.0 35.0 41.0 16 38.472771028218766 40.0 38.0 41.0 34.0 41.0 17 38.51494839050636 40.0 38.0 41.0 34.0 41.0 18 38.412571397860376 40.0 38.0 41.0 34.0 41.0 19 38.27765220844443 40.0 37.0 41.0 34.0 41.0 20 38.416130467366735 40.0 37.0 41.0 34.0 41.0 21 38.33727558006563 40.0 37.0 41.0 34.0 41.0 22 38.4313923665125 40.0 37.0 41.0 34.0 41.0 23 38.44951018007339 40.0 37.0 41.0 34.0 41.0 24 38.39818135131181 40.0 37.0 41.0 34.0 41.0 25 38.13714808655227 40.0 37.0 41.0 34.0 41.0 26 38.252086325350305 40.0 37.0 41.0 34.0 41.0 27 38.263220360743944 40.0 37.0 41.0 34.0 41.0 28 38.098846288207 40.0 37.0 41.0 34.0 41.0 29 38.00553865262944 40.0 37.0 41.0 34.0 41.0 30 37.87490109548876 40.0 37.0 41.0 33.0 41.0 31 37.86558093150881 40.0 37.0 41.0 33.0 41.0 32 37.82568023910259 40.0 37.0 41.0 33.0 41.0 33 37.73507624231531 40.0 37.0 41.0 33.0 41.0 34 37.62203099853995 40.0 37.0 41.0 33.0 41.0 35 37.53244665127986 40.0 37.0 41.0 33.0 41.0 36 37.412974480396755 40.0 36.0 41.0 33.0 41.0 37 37.40494268763492 40.0 36.0 41.0 33.0 41.0 38 37.283552142458326 40.0 36.0 41.0 33.0 41.0 39 37.216147784986816 40.0 36.0 41.0 32.0 41.0 40 37.15234429817359 40.0 36.0 41.0 32.0 41.0 41 36.99990594740818 40.0 35.0 41.0 31.0 41.0 42 36.987994112009176 40.0 35.0 41.0 31.0 41.0 43 36.916237956043105 40.0 35.0 41.0 31.0 41.0 44 36.82016696574396 40.0 35.0 41.0 31.0 41.0 45 36.812989110799926 39.0 35.0 41.0 31.0 41.0 46 36.678111722535895 39.0 35.0 41.0 31.0 41.0 47 36.64187310961755 39.0 35.0 41.0 31.0 41.0 48 36.54609920607669 39.0 35.0 41.0 31.0 41.0 49 36.451144903693134 39.0 35.0 41.0 31.0 41.0 50 36.33222062647984 39.0 35.0 41.0 30.0 41.0 51 35.23793962122185 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 8.0 10 18.0 11 14.0 12 15.0 13 12.0 14 24.0 15 29.0 16 47.0 17 80.0 18 146.0 19 259.0 20 480.0 21 863.0 22 1344.0 23 1953.0 24 2925.0 25 4048.0 26 5793.0 27 6609.0 28 6860.0 29 7398.0 30 8504.0 31 10503.0 32 13491.0 33 18323.0 34 32753.0 35 45847.0 36 43897.0 37 66333.0 38 129074.0 39 261999.0 40 185.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.77323472242542 20.34148555322332 23.97191559750268 13.913364126848581 2 31.996094578092016 25.41420462858184 25.199973724990222 17.389727068335926 3 30.8641791000212 24.044470454050085 28.53062979406961 16.560720651859107 4 27.422451398696403 25.656054150406515 28.325505570003497 18.59598888089359 5 24.8406331083038 29.88528569594439 26.428330432134338 18.84575076361747 6 25.338066816155546 34.21006273158584 25.99837572666824 14.453494725590366 7 80.98390954230725 5.42175869389315 9.64994521063302 3.9443865531665865 8 82.5180118177828 5.198570400604325 8.382773148134325 3.9006446334785427 9 75.80668758714793 7.953117022324801 10.441927749694702 5.7982676408325595 10 35.509779976651075 33.97224403512491 17.655164383029927 12.862811605194091 11 25.869687894684983 26.64450210349368 29.783619322881055 17.70219067894028 12 23.83994338929711 23.637954251625022 32.65267124289753 19.86943111618033 13 23.477169106560094 25.20997614348544 33.442563724363204 17.87029102559126 14 19.73014370638871 29.545352756935262 31.047805588814008 19.67669794786202 15 19.019822703399928 26.985330781472534 35.05623747831565 18.938609036811886 16 22.10459842529089 27.73625861775534 30.737730615462244 19.421412341491525 17 22.44184414739086 25.659786396113688 29.852740513377864 22.045628943117592 18 24.48621905595084 24.858398597869932 30.622329578196517 20.033052767982706 19 24.061937363959643 26.775578572729525 28.65200242446681 20.51048163884402 20 24.369175830573962 26.898891970894457 29.008058664930925 19.72387353360066 21 24.057309379282753 27.81314287932306 29.622834177816127 18.50671356357806 22 22.419599962976122 25.52796347773641 29.841394486428065 22.211042072859406 23 21.000749434937998 26.729448015788893 30.393169691776222 21.876632857496887 24 20.58184217676513 26.107805170802497 31.398487395459796 21.911865256972582 25 20.916549971784224 28.24175397633458 28.843690563987114 21.998005487894087 26 21.131378034688986 28.25533935070868 28.737844075731743 21.875438538870593 27 21.464592931425212 27.5529307086191 29.049411947366377 21.933064412589314 28 20.42628217569024 27.6311585786414 30.41108447117064 21.531474774497713 29 20.73396851178942 27.1150636422538 30.628749040812853 21.52221880514393 30 22.45931105730042 26.66823918619129 29.42726450276037 21.44518525374792 31 22.82835551282549 27.35168802008844 27.545018347719896 22.274938119366176 32 22.271056583830717 28.154867296271636 28.864591139947272 20.709484979950375 33 22.245677313021954 25.88775196390769 28.991039624506225 22.87553109856413 34 21.257527939591363 27.061020724413964 30.080855371000155 21.600595964994522 35 21.846327022354657 26.953084178562577 29.842439515226072 21.358149283856694 36 21.955607176660624 27.840761497556127 29.01671747497156 21.18691385081169 37 21.172134157811293 27.62130544997447 30.34405333826985 20.862507053944388 38 21.231999378954313 27.690128060814708 28.2448890627286 22.832983497502383 39 22.26941439571956 25.60544489861728 30.233728155165874 21.891412550497286 40 23.540766573410288 25.774739563894556 29.660455214544413 21.024038648150746 41 21.086143216718074 26.291580949423594 29.282751948978706 23.33952388487963 42 22.122363914857026 26.393545902143504 29.626715713351587 21.857374469647887 43 22.219253013415184 25.606788507071858 29.630597248887042 22.543361230625912 44 21.051060107070665 26.403399030810437 28.72336296238792 23.822177899730978 45 21.60432821070169 25.47556274800773 28.518537317978378 24.401571723312205 46 22.212982840627138 26.464757150236323 28.455686300269615 22.86657370886692 47 20.95252882040135 26.06406325111445 30.224322895983807 22.759085032500394 48 21.6110462529746 25.279843783123678 29.875133987620888 23.23397597628083 49 22.066230939421175 24.613264699822942 30.824468005696897 22.496036355058983 50 20.48958106288386 25.371358447863514 30.707126200663442 23.431934288589183 51 21.218563294408497 24.492190649082314 29.060608684487892 25.228637372021296 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 192.0 1 553.5 2 915.0 3 3457.0 4 5999.0 5 3930.0 6 1861.0 7 1885.0 8 1909.0 9 1893.0 10 1877.0 11 1945.5 12 2014.0 13 2003.5 14 1993.0 15 1997.5 16 2002.0 17 2041.0 18 2080.0 19 2142.5 20 2205.0 21 2648.5 22 3092.0 23 3339.0 24 3586.0 25 4364.0 26 6235.5 27 7329.0 28 8331.0 29 9333.0 30 11152.0 31 12971.0 32 14645.5 33 16320.0 34 18680.0 35 21040.0 36 23277.0 37 25514.0 38 27356.0 39 29198.0 40 32444.5 41 35691.0 42 38767.5 43 41844.0 44 45030.0 45 48216.0 46 55101.5 47 61987.0 48 62852.5 49 63718.0 50 62231.0 51 60744.0 52 53513.5 53 46283.0 54 41209.0 55 36135.0 56 32557.0 57 28979.0 58 26002.5 59 23026.0 60 21476.0 61 19926.0 62 18145.5 63 16365.0 64 13624.0 65 10883.0 66 8780.5 67 6678.0 68 5730.5 69 4783.0 70 3747.5 71 2712.0 72 2328.5 73 1945.0 74 1718.0 75 1273.5 76 1056.0 77 753.5 78 451.0 79 315.0 80 179.0 81 135.0 82 91.0 83 50.5 84 10.0 85 30.0 86 50.0 87 29.5 88 9.0 89 5.5 90 2.0 91 3.0 92 4.0 93 3.5 94 3.0 95 4.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 669838.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.29591636831704 #Duplication Level Percentage of deduplicated Percentage of total 1 73.7723733989517 23.087740281858487 2 8.973403620922879 5.616617785191115 3 3.2664979683291997 3.066841417023245 4 1.7764923141513942 2.223878195705601 5 1.2356559077771698 1.9335491974905594 6 0.9925105041125749 1.8636915438829997 7 0.8041271694049559 1.7616127650232305 8 0.6952696890000305 1.74072816322966 9 0.6102723298304055 1.7189128616643328 >10 7.686608996258309 49.99031826752037 >50 0.14176737941980347 2.7485304830384196 >100 0.03927339564905303 2.038502185117466 >500 0.002873663096272173 0.5856197086216132 >1k 0.002873663096272173 1.623457144632888 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3736 0.5577467984796324 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTC 1766 0.26364583675455855 No Hit GCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGC 1386 0.20691570200555956 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCG 1374 0.20512422406611747 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGC 1311 0.1957189648840466 No Hit CCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGC 1258 0.1878066039848441 No Hit CTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGCT 814 0.12152192022548734 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCC 743 0.11092234241712176 No Hit CGCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTG 727 0.10853370516453233 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.98579656573679E-4 0.0 0.0 0.1254034557609452 0.0 2 2.98579656573679E-4 0.0 0.0 0.6562780851489465 0.0 3 2.98579656573679E-4 0.0 0.0 0.9977039224409484 0.0 4 2.98579656573679E-4 0.0 0.0 1.4212391652907121 0.0 5 2.98579656573679E-4 0.0 0.0 2.5267303437547586 0.0 6 2.98579656573679E-4 0.0 0.0 3.305724667755487 0.0 7 2.98579656573679E-4 0.0 0.0 3.922590238236708 0.0 8 2.98579656573679E-4 0.0 0.0 4.875357922363317 0.0 9 2.98579656573679E-4 0.0 0.0 5.270378808010295 0.0 10 2.98579656573679E-4 0.0 0.0 6.2276251869855095 0.0 11 2.98579656573679E-4 0.0 0.0 7.190096709950764 0.0 12 2.98579656573679E-4 0.0 0.0 8.115842935157456 0.0 13 4.4786948486051853E-4 0.0 0.0 8.512804588572163 0.0 14 4.4786948486051853E-4 0.0 0.0 8.690011614748641 0.0 15 4.4786948486051853E-4 0.0 0.0 8.948730887169734 0.0 16 4.4786948486051853E-4 0.0 0.0 9.433922829101961 0.0 17 4.4786948486051853E-4 0.0 0.0 10.053027747007485 0.0 18 4.4786948486051853E-4 0.0 0.0 10.799775468098257 0.0 19 4.4786948486051853E-4 0.0 0.0 11.235552476867541 0.0 20 5.97159313147358E-4 0.0 0.0 11.659684879030452 0.0 21 5.97159313147358E-4 0.0 0.0 12.151893442892161 0.0 22 5.97159313147358E-4 0.0 0.0 12.684111680734745 0.0 23 5.97159313147358E-4 0.0 0.0 13.204685311970954 0.0 24 5.97159313147358E-4 0.0 0.0 13.615530919416337 0.0 25 5.97159313147358E-4 0.0 0.0 13.970691420910727 0.0 26 5.97159313147358E-4 0.0 0.0 14.332719254506314 0.0 27 5.97159313147358E-4 0.0 0.0 14.742221253497114 0.0 28 7.464491414341975E-4 0.0 0.0 15.109623520911025 0.0 29 7.464491414341975E-4 0.0 0.0 15.507928782780313 0.0 30 7.464491414341975E-4 0.0 0.0 16.003421722864335 0.0 31 0.0010450287980078765 0.0 0.0 16.413968750653144 0.0 32 0.0010450287980078765 0.0 0.0 16.839444761270634 0.0 33 0.0010450287980078765 0.0 0.0 17.27611750900964 0.0 34 0.0010450287980078765 0.0 0.0 17.715626763486096 0.0 35 0.0010450287980078765 0.0 0.0 18.153643119679685 0.0 36 0.0010450287980078765 0.0 0.0 18.54776826635694 0.0 37 0.0010450287980078765 0.0 0.0 18.962047539852918 0.0 38 0.001194318626294716 0.0 0.0 19.377073262490335 0.0 39 0.001194318626294716 0.0 0.0 19.820911921987108 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACGC 20 7.031177E-4 45.0 9 GAGTACG 20 7.031177E-4 45.0 1 ATTACGG 25 3.889056E-5 45.0 2 ACGTCGC 20 7.031177E-4 45.0 20 ATCGAGC 20 7.031177E-4 45.0 37 GTACGCT 20 7.031177E-4 45.0 10 ATAGACG 30 2.1641408E-6 44.999996 1 CTAACGG 55 6.002665E-11 40.90909 2 GCGATAC 55 6.002665E-11 40.90909 9 CGCACGG 55 6.002665E-11 40.90909 2 CGTTTTT 2085 0.0 40.791363 1 AACACGT 195 0.0 40.384617 41 CACGACC 200 0.0 39.375 27 ACGATAG 35 6.244387E-6 38.571426 1 TACGCGG 35 6.244387E-6 38.571426 2 CGAGACA 205 0.0 38.41463 22 CGGGCAC 90 0.0 37.500004 6 GCGAGAC 210 0.0 37.5 21 GCTGCGA 60 1.546141E-10 37.499996 28 TCGATAG 30 1.13941336E-4 37.499996 1 >>END_MODULE