##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935563.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 756479 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07761484456277 33.0 31.0 34.0 30.0 34.0 2 32.12111638260943 33.0 31.0 34.0 30.0 34.0 3 32.09105606368452 33.0 31.0 34.0 30.0 34.0 4 35.76845755136626 37.0 35.0 37.0 35.0 37.0 5 35.818560726735306 37.0 35.0 37.0 35.0 37.0 6 35.74012100798568 37.0 35.0 37.0 35.0 37.0 7 35.99855382634548 37.0 35.0 37.0 35.0 37.0 8 35.77874468425429 37.0 35.0 37.0 35.0 37.0 9 37.61651017410926 39.0 37.0 39.0 35.0 39.0 10 37.28263970315105 39.0 37.0 39.0 34.0 39.0 11 37.26776817333991 39.0 37.0 39.0 34.0 39.0 12 37.13596411797287 39.0 37.0 39.0 34.0 39.0 13 37.019904055499225 39.0 37.0 39.0 33.0 39.0 14 38.050505037152384 40.0 37.0 41.0 33.0 41.0 15 38.143636505441656 40.0 37.0 41.0 33.0 41.0 16 38.06064279378542 40.0 37.0 41.0 33.0 41.0 17 38.07239328520686 40.0 37.0 41.0 33.0 41.0 18 37.994281401069955 40.0 37.0 41.0 33.0 41.0 19 37.799026807089156 40.0 36.0 41.0 33.0 41.0 20 37.78878858501029 40.0 35.0 41.0 33.0 41.0 21 37.80962194588349 40.0 35.0 41.0 33.0 41.0 22 37.93611322984511 40.0 36.0 41.0 34.0 41.0 23 37.94341812528834 40.0 36.0 41.0 34.0 41.0 24 37.87417363866016 40.0 35.0 41.0 34.0 41.0 25 37.646663026997444 40.0 35.0 41.0 33.0 41.0 26 37.64692608783588 40.0 35.0 41.0 33.0 41.0 27 37.66344207836569 40.0 35.0 41.0 33.0 41.0 28 37.5286068747447 40.0 35.0 41.0 33.0 41.0 29 37.46520656885386 40.0 35.0 41.0 33.0 41.0 30 37.29917023473222 39.0 35.0 41.0 33.0 41.0 31 37.18207907952501 39.0 35.0 41.0 32.0 41.0 32 37.06798866855524 39.0 35.0 41.0 32.0 41.0 33 36.88735444077099 39.0 35.0 41.0 31.0 41.0 34 36.664884286278934 39.0 35.0 41.0 31.0 41.0 35 36.58097581030009 39.0 35.0 41.0 31.0 41.0 36 36.46561900594729 39.0 35.0 41.0 30.0 41.0 37 36.40659423460532 39.0 35.0 41.0 30.0 41.0 38 36.24477348346748 39.0 35.0 41.0 30.0 41.0 39 36.13523177774928 39.0 35.0 41.0 30.0 41.0 40 36.013208562299816 39.0 35.0 41.0 29.0 41.0 41 35.81476683424127 39.0 35.0 41.0 28.0 41.0 42 35.87513599187816 39.0 35.0 41.0 29.0 41.0 43 35.84551587023566 39.0 35.0 41.0 29.0 41.0 44 35.75024290165358 38.0 35.0 41.0 29.0 41.0 45 35.749727355286794 38.0 35.0 41.0 29.0 41.0 46 35.60896336844777 38.0 35.0 40.0 28.0 41.0 47 35.45578528947929 38.0 35.0 40.0 28.0 41.0 48 35.401942420080395 38.0 35.0 40.0 27.0 41.0 49 35.38932739705927 38.0 35.0 40.0 27.0 41.0 50 35.25099573154046 38.0 35.0 40.0 27.0 41.0 51 34.04224968571501 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 7.0 9 27.0 10 18.0 11 20.0 12 23.0 13 17.0 14 33.0 15 54.0 16 60.0 17 123.0 18 265.0 19 576.0 20 993.0 21 1705.0 22 2528.0 23 3567.0 24 4682.0 25 6720.0 26 8951.0 27 9968.0 28 10185.0 29 10632.0 30 12230.0 31 15034.0 32 19668.0 33 27923.0 34 51302.0 35 59935.0 36 55491.0 37 79483.0 38 135864.0 39 238221.0 40 171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.86638624469417 18.86014020217349 22.531623481947285 14.741850071185056 2 33.446665406442214 27.602616860481255 22.831697905692028 16.119019827384502 3 29.699436468163693 27.26923020995956 27.245435762261742 15.785897559615005 4 26.876093057441118 23.506402689301357 32.06989222437107 17.54761202888646 5 27.36321827836596 26.96373593979476 26.509394180142476 19.163651601696806 6 24.142904165218066 34.60757007134369 26.98237492382472 14.267150839613526 7 74.8909090668743 5.521105014151087 15.042453260434197 4.545532658540422 8 74.88905838760891 8.311664963601105 11.998085868874087 4.8011907799159 9 69.63273269978413 6.5907976295442445 13.654311620018532 10.122158050653091 10 40.69617266308781 23.05615886230814 21.089547760083228 15.158120714520825 11 32.14444816049091 23.23884734407697 26.19702595842052 18.419678537011603 12 27.42283658898661 20.551528859360275 31.17654290469398 20.849091646959135 13 25.99794574601542 21.90847333501657 33.59220811152722 18.501372807440788 14 20.904876407672916 26.18988762411118 32.50149706733432 20.403738900881585 15 19.87127203795479 23.35517575504409 36.6946075171948 20.078944689806328 16 23.60779347476929 23.744479357655663 30.203085611100907 22.44464155647414 17 23.74738756792984 23.517242382141472 30.35880705214553 22.37656299778315 18 24.83466163634417 22.888143623286304 30.14782961589152 22.12936512447801 19 24.150174690903516 25.841034582585902 27.28919110775051 22.71959961876007 20 24.75984131747213 26.358299437261312 29.866790750305032 19.015068494961525 21 23.462647343812584 27.174581184672675 30.64870273993065 18.71406873158409 22 22.011318225621597 22.1703444510687 31.965593228628954 23.85274409468075 23 22.336376819449054 25.77361698077541 30.72616688632467 21.163839313450868 24 23.08576973055432 24.80624049048288 29.225398193472657 22.882591585490143 25 22.32091042844547 27.952263050263127 27.531894474268288 22.194932047023116 26 20.433085386375563 25.280807530678313 29.875779763879763 24.410327319066358 27 23.570383315333274 24.45659430070101 29.103253361957172 22.869769022008544 28 20.548885031838292 26.5193085333499 29.925880295421287 23.005926139390517 29 23.391131809343022 26.12326317055728 28.44071018494895 22.044894835150743 30 24.39671160732816 26.084266714608074 28.624588389102673 20.894433288961096 31 24.517137950954357 27.055080180679177 26.56293168746257 21.864850180903897 32 27.351321054517047 26.309388628104678 25.43520705796195 20.90408325941632 33 24.561157679195325 24.756404341693557 25.871438599088677 24.810999380022448 34 21.798490110102197 28.259607999693316 28.41440410110525 21.527497789099233 35 23.067262937900455 26.58500764727111 28.075994178291797 22.27173523653664 36 23.234088454537403 28.803178938212433 24.969496839965156 22.993235767285015 37 24.23292649234149 27.105841669101196 27.454298136498174 21.206933702059143 38 22.49857563792253 27.210933813099903 26.099600914235555 24.190889634742007 39 24.0458756951614 25.49284249794112 26.469736767312774 23.991545039584707 40 23.193109127946713 23.900200798700293 29.54411160124736 23.362578472105636 41 20.798462349913216 26.394916448440735 28.22550262465977 24.581118576986274 42 21.849648172652515 25.014706290591015 30.64777740029796 22.487868136458513 43 22.933088691159966 24.382567130085565 27.5968004399329 25.087543738821566 44 22.45812507683624 24.72771881308007 27.951469902006533 24.862686208077157 45 21.81263458734479 24.15863493897385 27.45562005025916 26.573110423422197 46 24.0193052285655 25.717039071805033 26.75341946042124 23.510236239208226 47 20.428326496836 25.215504990885407 31.477939242199714 22.87822927007888 48 21.706088338208993 26.268805875642286 28.332842022052162 23.69226376409656 49 22.388063647503763 24.129024070727674 30.270767595663596 23.212144686104967 50 21.253861640574293 23.960876640329737 29.304845210508155 25.480416508587812 51 20.68490995784417 24.95852495574894 27.383972324413502 26.97259276199339 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 308.0 1 861.5 2 1415.0 3 6138.5 4 10862.0 5 7129.0 6 3396.0 7 3351.0 8 3306.0 9 3281.0 10 3256.0 11 3183.5 12 3111.0 13 3022.0 14 2933.0 15 2819.5 16 2706.0 17 2710.5 18 2715.0 19 2550.5 20 2386.0 21 2758.5 22 3131.0 23 3117.0 24 3103.0 25 3837.5 26 5099.5 27 5627.0 28 6734.5 29 7842.0 30 9216.5 31 10591.0 32 11744.5 33 12898.0 34 15306.5 35 17715.0 36 19442.0 37 21169.0 38 22373.5 39 23578.0 40 26265.0 41 28952.0 42 32374.0 43 35796.0 44 39035.5 45 42275.0 46 64529.0 47 86783.0 48 75776.0 49 64769.0 50 64138.5 51 63508.0 52 56369.5 53 49231.0 54 46099.0 55 42967.0 56 41156.0 57 39345.0 58 37731.5 59 36118.0 60 32874.0 61 29630.0 62 27325.0 63 25020.0 64 22463.0 65 19906.0 66 16369.5 67 12833.0 68 11825.5 69 10818.0 70 9159.0 71 7500.0 72 6711.5 73 5923.0 74 4767.5 75 2870.0 76 2128.0 77 1688.5 78 1249.0 79 1015.5 80 782.0 81 595.0 82 408.0 83 268.0 84 128.0 85 140.5 86 153.0 87 85.0 88 17.0 89 11.0 90 5.0 91 3.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 756479.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.658766061188537 #Duplication Level Percentage of deduplicated Percentage of total 1 74.36349346843896 22.79892949741592 2 8.918408416935916 5.468547945859461 3 3.4035263996458087 3.1304375900946035 4 1.8671574561457336 2.2897897458950376 5 1.2752692465585806 1.9549090747633846 6 0.9587573458168668 1.7636590304907214 7 0.7424099070173581 1.593296016252774 8 0.6519305915618124 1.598990999586069 9 0.5681903403066455 1.567801324951969 >10 6.977718810684864 45.45288141198151 >50 0.2367773300400962 4.384644206971283 >100 0.027270515135519872 1.4271758759343947 >500 0.0043286531961142655 1.04350789589661 >1k 0.0030300572372799857 1.4696434489582932 >5k 0.001731461278445706 4.055785934948022 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTC 9748 1.288601534213111 Illumina PCR Primer Index 7 (95% over 24bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGC 7206 0.9525710561694376 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCG 6863 0.9072294141674785 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6744 0.8914986404116969 No Hit GAACTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTCT 2821 0.37291187197529607 Illumina PCR Primer Index 7 (96% over 25bp) GCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTCTGC 2333 0.3084024804389811 Illumina PCR Primer Index 7 (96% over 27bp) GAATGACTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCT 1380 0.18242409901662837 Illumina PCR Primer Index 7 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGAGCATCT 1252 0.16550360287595559 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTC 1148 0.15175569976165895 Illumina PCR Primer Index 7 (95% over 21bp) GAATGCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTT 1091 0.1442207913240156 Illumina PCR Primer Index 7 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTCTGC 1049 0.13866875352785735 Illumina PCR Primer Index 7 (96% over 27bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGAGCATCTCGTA 987 0.13047288820971897 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTT 909 0.1201619608739965 Illumina PCR Primer Index 7 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTCTG 865 0.11434554032564023 Illumina PCR Primer Index 7 (96% over 26bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 851 0.11249486106025416 No Hit CGTTCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTC 826 0.109190076657779 Illumina PCR Primer Index 7 (95% over 24bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCC 789 0.10429899574211578 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 788 0.10416680436601676 No Hit CTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTCTGCT 779 0.10297708198112572 Illumina PCR Primer Index 7 (96% over 28bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.643827521980121E-4 0.0 0.0 0.10826473702508596 0.0 2 2.643827521980121E-4 0.0 0.0 0.6670376837955846 0.0 3 2.643827521980121E-4 0.0 0.0 0.9726641453364865 0.0 4 2.643827521980121E-4 0.0 0.0 1.656093559768348 0.0 5 2.643827521980121E-4 0.0 0.0 3.654430592257022 0.0 6 2.643827521980121E-4 0.0 0.0 4.53257790368272 0.0 7 2.643827521980121E-4 0.0 0.0 5.309070046888281 0.0 8 2.643827521980121E-4 0.0 0.0 6.2753890061720154 0.0 9 2.643827521980121E-4 0.0 0.0 6.71360341794022 0.0 10 2.643827521980121E-4 0.0 0.0 8.310210858464016 0.0 11 2.643827521980121E-4 0.0 0.0 9.171173290996842 0.0 12 3.9657412829701815E-4 0.0 0.0 10.797259408390715 0.0 13 3.9657412829701815E-4 0.0 0.0 11.188281498891575 0.0 14 3.9657412829701815E-4 0.0 0.0 11.395425385238719 0.0 15 5.287655043960242E-4 0.0 0.0 11.7303983322736 0.0 16 6.609568804950303E-4 0.0 0.0 12.139795024052221 0.0 17 6.609568804950303E-4 0.0 0.0 12.576951904811635 0.0 18 6.609568804950303E-4 0.0 0.0 13.11470642278239 0.0 19 6.609568804950303E-4 0.0 0.0 13.60156726095503 0.0 20 7.931482565940363E-4 0.0 0.0 13.96866271238197 0.0 21 7.931482565940363E-4 0.0 0.0 14.346862239401226 0.0 22 7.931482565940363E-4 0.0 0.0 14.784944459793332 0.0 23 7.931482565940363E-4 0.0 0.0 15.198306892854925 0.0 24 9.253396326930423E-4 0.0 0.0 15.536320241540082 0.0 25 9.253396326930423E-4 0.0 0.0 15.837320004917519 0.0 26 0.0010575310087920485 0.0 0.0 16.143739614715017 0.0 27 0.0010575310087920485 0.0 0.0 16.511099448894154 0.0 28 0.0010575310087920485 0.0 0.0 16.82941628254056 0.0 29 0.0010575310087920485 0.0 0.0 17.18051657745952 0.0 30 0.0010575310087920485 0.0 0.0 17.656008957287643 0.0 31 0.0010575310087920485 0.0 0.0 18.016098265781338 0.0 32 0.0010575310087920485 0.0 0.0 18.35860612125386 0.0 33 0.0011897223848910544 0.0 0.0 18.71089613855771 0.0 34 0.0011897223848910544 0.0 0.0 19.059088223202494 0.0 35 0.0013219137609900605 0.0 0.0 19.435569262332464 0.0 36 0.0014541051370890667 0.0 0.0 19.796980484587145 0.0 37 0.0014541051370890667 0.0 0.0 20.15971362060282 0.0 38 0.0015862965131880726 0.0 0.0 20.586030808522114 0.0 39 0.0015862965131880726 0.0 0.0 21.21856654315586 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAA 20 7.031756E-4 45.0 36 CGACGCT 20 7.031756E-4 45.0 35 ATATGCG 20 7.031756E-4 45.0 1 ACGGAGT 25 3.889537E-5 45.0 29 AATTCGG 20 7.031756E-4 45.0 1 CATCGTT 25 3.889537E-5 45.0 36 TCGAGTA 20 7.031756E-4 45.0 26 ACGTACG 25 3.889537E-5 45.0 1 CGTTTTT 3365 0.0 42.45914 1 CCGATGA 475 0.0 41.210526 18 CGAATAT 115 0.0 41.086956 14 TCGTAAG 40 3.4561344E-7 39.375 1 TACGGCT 855 0.0 38.94737 7 GCCGATG 65 9.094947E-12 38.076927 9 CGATGAA 515 0.0 38.00971 19 GCATATC 125 0.0 37.8 28 ACGATAG 30 1.13955306E-4 37.499996 1 CAATGCG 30 1.13955306E-4 37.499996 1 TACCGGA 30 1.13955306E-4 37.499996 14 TGTTCGG 55 2.746674E-9 36.818184 2 >>END_MODULE