##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935562.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 950659 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10686376503036 33.0 31.0 34.0 30.0 34.0 2 32.144137908545545 33.0 31.0 34.0 30.0 34.0 3 32.10216176357663 33.0 31.0 34.0 30.0 34.0 4 35.782316266926415 37.0 35.0 37.0 35.0 37.0 5 35.866499975280306 37.0 35.0 37.0 35.0 37.0 6 35.810855417136956 37.0 35.0 37.0 35.0 37.0 7 36.08254905281494 37.0 35.0 37.0 35.0 37.0 8 35.92741350999675 37.0 35.0 37.0 35.0 37.0 9 37.74649269611922 39.0 38.0 39.0 35.0 39.0 10 37.35724060888289 39.0 37.0 39.0 34.0 39.0 11 37.353859796204524 39.0 37.0 39.0 34.0 39.0 12 37.22118867017511 39.0 37.0 39.0 34.0 39.0 13 37.190753992756605 39.0 37.0 39.0 34.0 39.0 14 38.21852525458655 40.0 38.0 41.0 33.0 41.0 15 38.374480228978 40.0 38.0 41.0 34.0 41.0 16 38.17376788101728 40.0 37.0 41.0 33.0 41.0 17 38.25056408238916 40.0 37.0 41.0 34.0 41.0 18 38.12854030730262 40.0 37.0 41.0 34.0 41.0 19 37.93381854061236 40.0 37.0 41.0 34.0 41.0 20 38.05404671917059 40.0 36.0 41.0 34.0 41.0 21 37.941191320967874 40.0 36.0 41.0 34.0 41.0 22 38.06979263858018 40.0 36.0 41.0 34.0 41.0 23 38.08965780579577 40.0 36.0 41.0 34.0 41.0 24 38.02049736025221 40.0 36.0 41.0 34.0 41.0 25 37.74981986180113 40.0 35.0 41.0 33.0 41.0 26 37.84433324672674 40.0 35.0 41.0 34.0 41.0 27 37.86509358245175 40.0 35.0 41.0 34.0 41.0 28 37.75161651023132 40.0 35.0 41.0 33.0 41.0 29 37.71449910009793 40.0 35.0 41.0 33.0 41.0 30 37.51972473831311 40.0 35.0 41.0 33.0 41.0 31 37.44626937734771 40.0 35.0 41.0 33.0 41.0 32 37.33571869618864 40.0 35.0 41.0 33.0 41.0 33 37.201159406264495 40.0 35.0 41.0 33.0 41.0 34 37.018063259275934 40.0 35.0 41.0 32.0 41.0 35 36.87665608803998 40.0 35.0 41.0 31.0 41.0 36 36.74003296660527 39.0 35.0 41.0 31.0 41.0 37 36.690645120910865 39.0 35.0 41.0 31.0 41.0 38 36.538397048784056 39.0 35.0 41.0 31.0 41.0 39 36.45826000700567 39.0 35.0 41.0 31.0 41.0 40 36.3494091993028 39.0 35.0 41.0 30.0 41.0 41 36.19323858502365 39.0 35.0 41.0 30.0 41.0 42 36.166171045558926 39.0 35.0 41.0 30.0 41.0 43 36.09954883927886 39.0 35.0 41.0 30.0 41.0 44 35.97076764644315 39.0 35.0 41.0 30.0 41.0 45 35.94980218984936 38.0 35.0 41.0 30.0 41.0 46 35.846206683995 38.0 35.0 41.0 29.0 41.0 47 35.781532600017464 38.0 35.0 40.0 29.0 41.0 48 35.66050392412001 38.0 35.0 40.0 29.0 41.0 49 35.627985429055 38.0 35.0 40.0 29.0 41.0 50 35.5154150962648 38.0 35.0 40.0 28.0 41.0 51 34.42932113407647 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 9.0 9 23.0 10 40.0 11 28.0 12 20.0 13 27.0 14 48.0 15 65.0 16 91.0 17 175.0 18 317.0 19 530.0 20 871.0 21 1392.0 22 2035.0 23 3029.0 24 4616.0 25 7322.0 26 10201.0 27 11783.0 28 12571.0 29 13183.0 30 14391.0 31 17432.0 32 22886.0 33 32372.0 34 61457.0 35 71811.0 36 69748.0 37 103599.0 38 182400.0 39 306032.0 40 152.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.2214053619647 19.385605143379486 23.13279525045258 16.260194244203234 2 35.32013056206274 22.054280241390444 24.414748085275583 18.210841111271233 3 30.877422924518676 22.705933462997773 29.54119195210901 16.87545166037454 4 27.409407579373884 24.62670631635529 28.619305134648705 19.344580969622125 5 24.866960708308657 28.077049709727675 27.682376120144024 19.373613461819644 6 24.966681007595785 32.05502709173321 27.542052407856023 15.436239492814984 7 77.20234069208833 5.850152367988942 11.976534172610789 4.970972767311938 8 78.68257703340524 4.6789648023108175 11.666012734324296 4.972445429959638 9 72.96233454898129 6.58069823143735 14.129987724304929 6.326979495276435 10 39.482190775030794 23.274696815577407 21.46248023739322 15.780632171998581 11 31.33805076268147 24.090236351835937 26.222967436273155 18.348745449209446 12 26.938786673244557 22.30189794658232 30.32570038257672 20.433614997596404 13 25.012859500620095 22.454002960051923 32.39931458072768 20.133822958600298 14 21.02604614272836 24.765872936562953 33.0749511654547 21.13312975525399 15 20.12446103176849 23.84303940740055 34.86276361976271 21.16973594106825 16 24.19731996436156 24.167656331029317 31.434930926862314 20.200092777746807 17 24.35605195974582 24.02344058174382 29.940914670770486 21.679592787739875 18 25.830292460282816 22.860142280249807 30.756033446272536 20.553531813194848 19 24.759877095783033 25.660936255797296 28.447213985246023 21.131972663173652 20 25.05525114683604 26.34467248508666 28.443321948248528 20.156754419828772 21 23.760149538372854 26.335310558254854 30.492847593090687 19.411692310281605 22 23.92350990207845 23.431114626800987 30.204416094519697 22.440959376600862 23 22.113397127676695 25.461495657223043 30.51567386413004 21.90943335097022 24 22.26423985887684 24.206997461760736 30.937170951939652 22.591591727422767 25 23.35748149441598 25.363458400961857 28.5491432785047 22.72991682611746 26 21.98811561243306 24.880740623083568 29.179232511342136 23.95191125314124 27 22.1865043091161 23.548717258238757 30.5679533881234 23.696825044521745 28 20.880673301362528 25.003182003220925 30.105642506934664 24.010502188481887 29 22.215326420935373 24.66478516481725 29.81268783023145 23.30720058401593 30 23.304465639098773 22.982373280008918 30.720268781971242 22.992892298921063 31 23.095031972557983 23.650541361308314 30.756349016839895 22.498077649293805 32 24.105173358691182 23.192332897495316 30.329487229385087 22.37300651442841 33 23.669685975728417 22.71750438380113 30.23544720031052 23.37736244015993 34 21.438707254651774 23.74721114511092 32.35744888545735 22.45663271477996 35 21.774684718705657 24.420849116244625 31.434930926862314 22.369535238187403 36 23.565337308119947 26.11809281771908 28.6776856896111 21.638884184549877 37 23.02465973603574 25.387231383703305 30.01686198731617 21.57124689294479 38 23.577223799490667 25.644842156861714 28.874812104024684 21.903121939622935 39 23.668213313080717 23.32539848673394 28.55577026041935 24.450617939765994 40 25.30444670486473 22.324303456865184 30.17264865740502 22.19860118086506 41 22.93261832055448 23.44415821025205 29.12947755188769 24.493745917305784 42 24.09486472015728 23.86323592371187 29.230460133444275 22.811439222686577 43 23.42175269996918 23.183076160852632 30.12583902324598 23.26933211593221 44 23.52694288909062 22.876025998807144 29.327761058381608 24.26927005372063 45 22.390047325066085 22.882547790532673 29.37814715897078 25.349257725430462 46 22.61094672222111 23.37420673448629 28.816326358873162 25.198520184419436 47 21.535166658076136 24.555597748509193 30.793901914356255 23.115333679058423 48 21.832328942344205 24.019443354557207 30.448562523470564 23.699665179628028 49 23.799385478915152 22.7634724964472 30.179486019697915 23.25765600493973 50 21.32078905264664 23.545561552565115 30.74183277074114 24.39181662404711 51 21.440074727110353 22.781460018786966 29.740106599737654 26.038358654365023 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 477.0 1 979.0 2 1481.0 3 8015.0 4 14549.0 5 9347.0 6 4145.0 7 4061.0 8 3977.0 9 4025.0 10 4073.0 11 3937.5 12 3802.0 13 3838.0 14 3874.0 15 3614.0 16 3354.0 17 3193.5 18 3033.0 19 3038.0 20 3043.0 21 3320.0 22 3597.0 23 4030.0 24 4463.0 25 4660.0 26 6087.0 27 7317.0 28 8241.0 29 9165.0 30 10954.5 31 12744.0 32 14652.5 33 16561.0 34 19565.5 35 22570.0 36 24057.5 37 25545.0 38 27697.0 39 29849.0 40 33305.0 41 36761.0 42 40552.5 43 44344.0 44 49404.0 45 54464.0 46 63945.0 47 73426.0 48 80592.5 49 87759.0 50 87699.0 51 87639.0 52 79700.0 53 71761.0 54 65757.5 55 59754.0 56 54993.5 57 50233.0 58 47171.0 59 44109.0 60 41406.5 61 38704.0 62 35589.0 63 32474.0 64 28863.5 65 25253.0 66 22331.0 67 19409.0 68 16802.0 69 14195.0 70 12343.0 71 10491.0 72 8826.5 73 7162.0 74 5968.5 75 3758.0 76 2741.0 77 2096.5 78 1452.0 79 1054.5 80 657.0 81 483.0 82 309.0 83 236.5 84 164.0 85 120.5 86 77.0 87 52.0 88 27.0 89 25.5 90 24.0 91 14.5 92 5.0 93 7.5 94 10.0 95 7.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 950659.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.56376424192108 #Duplication Level Percentage of deduplicated Percentage of total 1 72.70914147246181 22.949741996692712 2 9.126136225101652 5.761104244975283 3 3.553554423605887 3.3649066214259595 4 1.9953479907564076 2.5192277424330474 5 1.4198956258462692 2.2408625391173316 6 1.0974917037922536 2.078458163757779 7 0.8639479702311239 1.9088615034763015 8 0.7729926313573805 1.9518845741525257 9 0.6592014372564995 1.8726190878149716 >10 7.644885691469488 48.15711224284999 >50 0.11645948156712882 2.2906040209748424 >100 0.03557546503881232 2.042080972936188 >500 0.0020137055682313263 0.39439059305048485 >1k 0.0030205583523469897 1.4687686201034038 >5k 3.3561759470522107E-4 0.9993770762391281 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9434 0.9923642441716747 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTT 2330 0.2450931406529576 No Hit CGTTCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTC 2018 0.21227380164706797 No Hit CCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 1660 0.1746157139415921 No Hit GCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 1491 0.15683857198006856 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCT 1418 0.1491596881742034 No Hit CGCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTG 1380 0.1451624609875886 No Hit CTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGCT 1264 0.13296039904950147 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCC 1209 0.1271749386478222 No Hit CGTCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCT 1095 0.11518325708797791 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.363313238500872E-4 0.0 0.0 0.140008141720638 0.0 2 7.363313238500872E-4 0.0 0.0 0.5881183473779767 0.0 3 7.363313238500872E-4 0.0 0.0 0.9650147950000999 0.0 4 7.363313238500872E-4 0.0 0.0 1.395558239074158 0.0 5 7.363313238500872E-4 0.0 0.0 2.454297492581462 0.0 6 7.363313238500872E-4 0.0 0.0 3.6365300281173374 0.0 7 7.363313238500872E-4 0.0 0.0 4.590289472881444 0.0 8 7.363313238500872E-4 0.0 0.0 5.8711904058132305 0.0 9 7.363313238500872E-4 0.0 0.0 6.591848391484223 0.0 10 7.363313238500872E-4 0.0 0.0 7.698764751609147 0.0 11 8.415215129715281E-4 0.0 0.0 8.835870696011924 0.0 12 9.467117020929692E-4 0.0 0.0 9.670870417257923 0.0 13 9.467117020929692E-4 0.0 0.0 10.081427725398907 0.0 14 9.467117020929692E-4 0.0 0.0 10.314318804113778 0.0 15 9.467117020929692E-4 0.0 0.0 10.587287344883917 0.0 16 9.467117020929692E-4 0.0 0.0 11.036028691675984 0.0 17 9.467117020929692E-4 0.0 0.0 11.536208040948436 0.0 18 9.467117020929692E-4 0.0 0.0 12.125167909839385 0.0 19 9.467117020929692E-4 0.0 0.0 12.493859522710036 0.0 20 9.467117020929692E-4 0.0 0.0 12.86581203144345 0.0 21 0.0010519018912144103 0.0 0.0 13.309399058968568 0.0 22 0.0010519018912144103 0.0 0.0 13.754248368763141 0.0 23 0.0010519018912144103 0.0 0.0 14.204777948770275 0.0 24 0.0010519018912144103 0.0 0.0 14.595559501356428 0.0 25 0.0011570920803358512 0.0 0.0 14.938900278648811 0.0 26 0.0011570920803358512 0.0 0.0 15.27529850345918 0.0 27 0.0011570920803358512 0.0 0.0 15.651774190324817 0.0 28 0.0011570920803358512 0.0 0.0 16.01257653901136 0.0 29 0.0011570920803358512 0.0 0.0 16.39799339195232 0.0 30 0.0011570920803358512 0.0 0.0 16.869035058838133 0.0 31 0.0013674724585787334 0.0 0.0 17.253294819698755 0.0 32 0.0013674724585787334 0.0 0.0 17.652491587414627 0.0 33 0.0013674724585787334 0.0 0.0 18.031176268251812 0.0 34 0.0014726626477001743 0.0 0.0 18.392188997316598 0.0 35 0.0014726626477001743 0.0 0.0 18.7807615559312 0.0 36 0.0015778528368216153 0.0 0.0 19.157763193742447 0.0 37 0.0015778528368216153 0.0 0.0 19.54717727387002 0.0 38 0.0015778528368216153 0.0 0.0 19.979824521726506 0.0 39 0.0015778528368216153 0.0 0.0 20.605811337188204 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGAAT 115 0.0 45.000004 12 CGTTACA 20 7.032671E-4 45.0 32 TAGTACG 45 3.8380676E-10 45.0 1 GCTACGA 120 0.0 44.999996 10 CTACGAA 120 0.0 43.124996 11 CGTTTTT 4325 0.0 42.71098 1 CTATGCG 70 0.0 41.785713 1 GCGTAAG 70 0.0 41.785713 1 CGAATAT 130 0.0 39.80769 14 AGTACGG 85 0.0 39.705883 2 ACGTTAG 40 3.4573895E-7 39.375 1 CGTAAGG 150 0.0 39.000004 2 TATAGCG 35 6.2471518E-6 38.571426 1 CATCGTT 30 1.1397735E-4 37.499996 36 CGTTTAG 30 1.1397735E-4 37.499996 30 TATCGCG 30 1.1397735E-4 37.499996 1 GACGGGA 285 0.0 37.105263 4 CGTTAGG 165 0.0 36.81818 2 TTCGTAG 25 0.0021069255 36.000004 1 TGACCGT 25 0.0021069255 36.000004 34 >>END_MODULE