##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935561.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 503474 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.191223379956064 31.0 31.0 33.0 28.0 34.0 2 31.198576291923715 31.0 31.0 34.0 28.0 34.0 3 31.022972387849222 31.0 31.0 34.0 27.0 34.0 4 34.856616230430966 35.0 35.0 37.0 32.0 37.0 5 34.855088842720775 35.0 35.0 37.0 33.0 37.0 6 35.014840885527356 37.0 35.0 37.0 32.0 37.0 7 35.516640382621546 37.0 35.0 37.0 33.0 37.0 8 35.187892522751916 37.0 35.0 37.0 32.0 37.0 9 37.1014014626376 39.0 37.0 39.0 33.0 39.0 10 36.42299503052789 38.0 35.0 39.0 32.0 39.0 11 36.6417670028641 39.0 35.0 39.0 32.0 39.0 12 36.79156619805591 39.0 35.0 39.0 33.0 39.0 13 36.836287474626296 39.0 37.0 39.0 33.0 39.0 14 37.90460083340947 40.0 37.0 41.0 33.0 41.0 15 38.108386927626846 40.0 37.0 41.0 33.0 41.0 16 38.05629883568963 40.0 37.0 41.0 33.0 41.0 17 37.94734981349583 40.0 37.0 41.0 33.0 41.0 18 37.93570273738068 39.0 37.0 41.0 33.0 41.0 19 37.821398920301746 39.0 37.0 41.0 33.0 41.0 20 37.86051514080171 39.0 36.0 41.0 33.0 41.0 21 37.82640017160767 40.0 36.0 41.0 33.0 41.0 22 37.940707961086375 40.0 37.0 41.0 33.0 41.0 23 37.978469593265984 40.0 37.0 41.0 34.0 41.0 24 37.94877789121186 40.0 36.0 41.0 33.0 41.0 25 37.52388206739573 39.0 36.0 41.0 33.0 41.0 26 37.61048236850364 39.0 36.0 41.0 33.0 41.0 27 37.655018928484886 40.0 36.0 41.0 33.0 41.0 28 37.55020716064782 40.0 36.0 41.0 33.0 41.0 29 37.55937943170849 40.0 36.0 41.0 33.0 41.0 30 37.30096489590326 39.0 36.0 41.0 32.0 41.0 31 37.30192621664674 39.0 36.0 41.0 32.0 41.0 32 37.278195100442126 39.0 36.0 41.0 32.0 41.0 33 37.27718412470157 40.0 36.0 41.0 32.0 41.0 34 37.20692429003285 40.0 36.0 41.0 32.0 41.0 35 37.20428463038807 40.0 36.0 41.0 32.0 41.0 36 37.05519252235468 40.0 35.0 41.0 32.0 41.0 37 37.06258118592022 40.0 35.0 41.0 32.0 41.0 38 36.903675264263896 39.0 35.0 41.0 31.0 41.0 39 36.822687964025945 39.0 35.0 41.0 31.0 41.0 40 36.72064098642631 39.0 35.0 41.0 31.0 41.0 41 36.5369234558289 39.0 35.0 41.0 30.0 41.0 42 36.579404298931024 39.0 35.0 41.0 31.0 41.0 43 36.5516054453656 39.0 35.0 41.0 31.0 41.0 44 36.53917580649646 39.0 35.0 41.0 31.0 41.0 45 36.538063534561864 39.0 35.0 41.0 31.0 41.0 46 36.396316393696594 39.0 35.0 41.0 31.0 41.0 47 36.35125746314606 39.0 35.0 41.0 31.0 41.0 48 36.28385775630916 39.0 35.0 40.0 31.0 41.0 49 36.23689803247039 39.0 35.0 40.0 30.0 41.0 50 36.12375812852302 38.0 35.0 40.0 30.0 41.0 51 34.98495850828444 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 20.0 9 38.0 10 38.0 11 31.0 12 20.0 13 34.0 14 25.0 15 40.0 16 64.0 17 102.0 18 193.0 19 351.0 20 623.0 21 1000.0 22 1478.0 23 2057.0 24 2695.0 25 3311.0 26 4299.0 27 4951.0 28 5370.0 29 6390.0 30 7693.0 31 9987.0 32 13280.0 33 19026.0 34 33344.0 35 36810.0 36 41934.0 37 63726.0 38 110727.0 39 133797.0 40 17.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.30814699468096 20.371856342134848 23.598438052411844 11.721558610772354 2 33.10399345348519 25.057500486618974 24.06996190468624 17.768544155209604 3 33.252561204749405 24.232035815156294 25.936592554928357 16.578810425165948 4 29.490500005958598 24.834450239734327 26.257959696031968 19.417090058275104 5 26.306224353194008 30.24724216146216 23.442521361579743 20.004012123764088 6 25.97373449274441 35.83879207267903 23.397434624230844 14.790038810345719 7 79.05611809150027 6.175691296869352 9.94410833528643 4.824082276343962 8 79.68077795477025 7.439510282556795 8.1553367204662 4.724375042206748 9 73.52673623662791 8.281063173073486 10.213238419461582 7.978962170837025 10 40.394538744801125 28.740113690081316 16.74386363546082 14.121483929656744 11 30.543185944060667 26.24246733694292 24.459257081795684 18.75508963720073 12 28.913111699909035 22.45319519975212 28.25170713879962 20.381985961539225 13 26.411492947004216 23.253435132698012 29.405689270945473 20.9293826493523 14 20.257252608873547 28.622332037006874 27.97264605520841 23.147769298911165 15 19.744813039004995 26.892153318741386 32.368702256720304 20.994331385533314 16 22.417244981865995 25.275386613807267 30.24843388139209 22.05893452293465 17 22.028148424744874 25.728041567191156 28.3210255147237 23.92278449334027 18 22.913397712692216 26.536027679681574 27.49496498329606 23.055609624330152 19 25.15561876084962 27.61691765612524 25.6072806142919 21.620182968733243 20 27.454446505678547 25.290283112931355 27.312234594040607 19.943035787349494 21 25.963604873340035 26.96067721471218 26.524507720358947 20.55121019158884 22 23.841747538105245 24.82849164008469 26.91320703750343 24.41655378430664 23 24.275732212586945 27.108847725999752 26.964649614478603 21.650770446934697 24 23.88603979550086 25.069020445941597 28.134918585666785 22.910021172890755 25 23.38114778518851 27.57322125869459 26.087940986029068 22.95768997008783 26 22.307606748312722 27.054227229211442 27.042111409923848 23.59605461255199 27 23.79030496113007 27.053631369246478 27.230204538863973 21.925859130759484 28 21.273789709101166 28.058648510151468 28.53374752221565 22.13381425853172 29 22.79938983939588 25.853966639786762 27.464576125082925 23.88206739573444 30 22.54952589408788 25.7490952859532 28.56254742052221 23.138831399436715 31 22.879036454712658 26.96782753429174 25.966782793153172 24.18635321784243 32 24.031032386975294 27.01748253137203 26.13839046306264 22.813094618590036 33 23.661797828686286 26.483989242741433 26.70842982954433 23.145783099027952 34 22.6089132705959 26.69710849021002 27.18015230180704 23.513825937387033 35 22.83315523741047 24.46203776163218 26.593428856306385 26.111378144650963 36 22.656979307769618 27.680078812411367 26.308806413042184 23.354135466776835 37 22.782904380365224 27.079849207704864 27.622479015798234 22.514767396131678 38 22.10203506040034 26.302251953427586 26.87626371967569 24.719449266496383 39 23.380154685246904 25.063459086268608 26.933466276312185 24.622919952172307 40 23.170809217556418 24.530363037614652 29.432105729392184 22.866722015436746 41 21.12681091774352 26.36203656991225 28.197086642011303 24.314065870332925 42 22.567401693036782 25.614828173848103 27.62704727552962 24.190722857585495 43 23.904511454414727 25.434878464429143 26.922144936977876 23.73846514417825 44 22.29688126894338 25.787428943699176 27.780183286525222 24.135506500832218 45 22.524897015536055 24.426087543746053 26.605147435617333 26.443868005100562 46 22.55329967386598 26.7936378045341 26.284972014443646 24.36809050715628 47 21.66308488621061 25.7707448646802 29.463289067558602 23.102881181550586 48 22.213659493836822 24.25388401387162 28.38478253097479 25.14767396131677 49 21.24320223089971 25.292269312814565 29.272812498758626 24.1917159575271 50 20.616357547758177 25.013406849211677 29.104382748662296 25.265852854367854 51 20.76293909913918 24.268581893007386 27.60221977698948 27.36625923086396 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 243.0 1 513.0 2 783.0 3 1879.5 4 2976.0 5 2070.0 6 1164.0 7 1137.5 8 1111.0 9 1081.0 10 1051.0 11 1057.0 12 1063.0 13 1036.5 14 1010.0 15 1024.5 16 1039.0 17 1060.0 18 1081.0 19 1156.5 20 1232.0 21 1324.5 22 1417.0 23 1652.5 24 1888.0 25 2215.0 26 3008.0 27 3474.0 28 4458.5 29 5443.0 30 6827.0 31 8211.0 32 9056.5 33 9902.0 34 11891.0 35 13880.0 36 14541.5 37 15203.0 38 16545.5 39 17888.0 40 20125.0 41 22362.0 42 24418.5 43 26475.0 44 28951.0 45 31427.0 46 37969.5 47 44512.0 48 43576.0 49 42640.0 50 42342.5 51 42045.0 52 38275.5 53 34506.0 54 31268.0 55 28030.0 56 26809.5 57 25589.0 58 25358.5 59 25128.0 60 25036.5 61 24945.0 62 23108.5 63 21272.0 64 17686.0 65 14100.0 66 11606.0 67 9112.0 68 7792.5 69 6473.0 70 5586.5 71 4700.0 72 3931.5 73 3163.0 74 2612.0 75 1560.5 76 1060.0 77 851.5 78 643.0 79 514.0 80 385.0 81 255.0 82 125.0 83 92.0 84 59.0 85 42.5 86 26.0 87 17.5 88 9.0 89 10.5 90 12.0 91 8.0 92 4.0 93 2.5 94 1.0 95 5.0 96 9.0 97 4.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 503474.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.47219291964779 #Duplication Level Percentage of deduplicated Percentage of total 1 70.91027007561712 23.02611969879766 2 8.638297293612105 5.610089124308872 3 3.4018065291766675 3.3139235367222653 4 2.1552620283696426 2.799443375104417 5 1.6619554391180038 2.6983668821448883 6 1.3984225084976898 2.724590728746887 7 1.2043091445064729 2.7374591212717116 8 1.061819111212633 2.758367602005245 9 0.9600028069756806 2.805605671636593 >10 8.493418199724596 45.68747025251472 >50 0.07422931666342718 1.5767959353549337 >100 0.035258925415127915 2.1593065356771386 >500 0.0018557329165856794 0.3908846993886243 >1k 0.003092888194309466 1.7115768363260369 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTC 2105 0.41809507541600954 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGC 1834 0.36426905858097935 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCG 1740 0.34559877967879177 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1595 0.3167988813722258 No Hit GCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 1247 0.24767912543646742 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 781 0.155122210878814 No Hit CCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 630 0.12513059264232115 No Hit CTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGCT 535 0.10626169375181241 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.9723997664228936E-4 0.0 0.0 0.11261753337808904 0.0 2 3.9723997664228936E-4 0.0 0.0 0.5950654850101494 0.0 3 3.9723997664228936E-4 0.0 0.0 0.8286425912758156 0.0 4 3.9723997664228936E-4 0.0 0.0 1.2006578294013197 0.0 5 3.9723997664228936E-4 0.0 0.0 2.35801650134863 0.0 6 3.9723997664228936E-4 0.0 0.0 2.9520888864171733 0.0 7 3.9723997664228936E-4 0.0 0.0 3.47724013553828 0.0 8 3.9723997664228936E-4 0.0 0.0 4.242125710563008 0.0 9 3.9723997664228936E-4 0.0 0.0 4.504105475158598 0.0 10 3.9723997664228936E-4 0.0 0.0 5.4564883191584865 0.0 11 3.9723997664228936E-4 0.0 0.0 6.304992909266417 0.0 12 3.9723997664228936E-4 0.0 0.0 7.355494027496952 0.0 13 3.9723997664228936E-4 0.0 0.0 7.661766049488156 0.0 14 3.9723997664228936E-4 0.0 0.0 7.807155880939234 0.0 15 3.9723997664228936E-4 0.0 0.0 8.086216964530443 0.0 16 3.9723997664228936E-4 0.0 0.0 8.572637315928926 0.0 17 3.9723997664228936E-4 0.0 0.0 9.151813201873384 0.0 18 3.9723997664228936E-4 0.0 0.0 9.743700767070395 0.0 19 3.9723997664228936E-4 0.0 0.0 10.168747542077645 0.0 20 5.95859964963434E-4 0.0 0.0 10.526064901067384 1.9861998832114468E-4 21 5.95859964963434E-4 0.0 0.0 10.9592550955958 1.9861998832114468E-4 22 5.95859964963434E-4 0.0 0.0 11.457989886270195 1.9861998832114468E-4 23 5.95859964963434E-4 0.0 0.0 11.921966178988388 1.9861998832114468E-4 24 5.95859964963434E-4 0.0 0.0 12.287824197475937 1.9861998832114468E-4 25 5.95859964963434E-4 0.0 0.0 12.631238157283196 1.9861998832114468E-4 26 5.95859964963434E-4 0.0 0.0 12.942078439005789 1.9861998832114468E-4 27 5.95859964963434E-4 0.0 0.0 13.269205559770713 1.9861998832114468E-4 28 5.95859964963434E-4 0.0 0.0 13.599311980360456 1.9861998832114468E-4 29 5.95859964963434E-4 0.0 0.0 13.942725940167715 1.9861998832114468E-4 30 5.95859964963434E-4 0.0 0.0 14.330829397347232 1.9861998832114468E-4 31 7.944799532845787E-4 0.0 0.0 14.706817035239158 1.9861998832114468E-4 32 7.944799532845787E-4 0.0 0.0 15.067312314042036 1.9861998832114468E-4 33 7.944799532845787E-4 0.0 0.0 15.451244751466808 1.9861998832114468E-4 34 7.944799532845787E-4 0.0 0.0 15.785124951834653 1.9861998832114468E-4 35 7.944799532845787E-4 0.0 0.0 16.146414710590815 1.9861998832114468E-4 36 7.944799532845787E-4 0.0 0.0 16.519224428669602 1.9861998832114468E-4 37 7.944799532845787E-4 0.0 0.0 16.885678307122117 1.9861998832114468E-4 38 9.930999416057234E-4 0.0 0.0 17.249947365703093 1.9861998832114468E-4 39 9.930999416057234E-4 0.0 0.0 17.59792958524174 1.9861998832114468E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACAG 20 7.029505E-4 45.0 13 GATCGGC 20 7.029505E-4 45.0 15 ATTACCG 20 7.029505E-4 45.0 1 TTCGTCA 20 7.029505E-4 45.0 45 TAGCCGT 25 3.8876722E-5 45.0 44 CCGTCGA 25 3.8876722E-5 45.0 41 CGGGCTT 20 7.029505E-4 45.0 6 TCCGTCG 20 7.029505E-4 45.0 40 TAATGCG 20 7.029505E-4 45.0 1 TATGGCC 110 0.0 40.909092 10 CGTTAGG 50 1.0786607E-9 40.5 2 CATACGA 100 0.0 40.5 18 CGTCGAA 50 1.0786607E-9 40.5 42 CGATGAA 390 0.0 40.384617 19 CGAATAT 135 0.0 40.0 14 GCTACGA 135 0.0 40.0 10 TCGATCA 85 0.0 39.705883 17 CCGATGA 405 0.0 39.444447 18 TACGGCT 275 0.0 39.272728 7 CCTATGC 115 0.0 39.130436 35 >>END_MODULE