##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935560.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 407296 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.177686498271527 31.0 31.0 33.0 28.0 34.0 2 31.178739786297925 31.0 31.0 34.0 28.0 34.0 3 31.00288733500943 31.0 31.0 34.0 27.0 34.0 4 34.84608491121936 35.0 35.0 37.0 32.0 37.0 5 34.83464114550597 35.0 35.0 37.0 32.0 37.0 6 34.985192587209305 36.0 35.0 37.0 32.0 37.0 7 35.4869259703017 37.0 35.0 37.0 33.0 37.0 8 35.233297159805154 37.0 35.0 37.0 32.0 37.0 9 37.13486506128221 39.0 37.0 39.0 34.0 39.0 10 36.39992536140792 38.0 35.0 39.0 32.0 39.0 11 36.55316526555625 38.0 35.0 39.0 32.0 39.0 12 36.60913929918291 39.0 35.0 39.0 33.0 39.0 13 36.63075011785041 39.0 35.0 39.0 33.0 39.0 14 37.574091078724074 39.0 36.0 41.0 33.0 41.0 15 37.81011843966059 40.0 37.0 41.0 33.0 41.0 16 37.82233314346323 39.0 36.0 41.0 33.0 41.0 17 37.73833526477058 39.0 36.0 41.0 33.0 41.0 18 37.70702388434947 39.0 36.0 41.0 33.0 41.0 19 37.58992231693903 39.0 36.0 41.0 33.0 41.0 20 37.63159225722816 39.0 36.0 41.0 33.0 41.0 21 37.55254655091137 39.0 36.0 41.0 33.0 41.0 22 37.68647126414205 39.0 36.0 41.0 33.0 41.0 23 37.74231762649277 40.0 36.0 41.0 33.0 41.0 24 37.71694050518542 40.0 35.0 41.0 33.0 41.0 25 37.30439532919547 39.0 35.0 41.0 32.0 41.0 26 37.3902027027027 39.0 35.0 41.0 33.0 41.0 27 37.44395967551854 39.0 35.0 41.0 33.0 41.0 28 37.31603060182275 39.0 35.0 41.0 32.0 41.0 29 37.29905032212445 39.0 35.0 41.0 32.0 41.0 30 37.00756452309868 39.0 35.0 41.0 31.0 41.0 31 37.00607666169076 39.0 35.0 41.0 32.0 41.0 32 37.00252641813325 39.0 35.0 41.0 32.0 41.0 33 37.00101645977373 39.0 35.0 41.0 32.0 41.0 34 36.90351734365179 39.0 35.0 41.0 31.0 41.0 35 36.88197281583909 39.0 35.0 41.0 31.0 41.0 36 36.72953822281584 39.0 35.0 41.0 31.0 41.0 37 36.7288777694846 39.0 35.0 41.0 31.0 41.0 38 36.56911435417976 39.0 35.0 41.0 31.0 41.0 39 36.47975919233187 39.0 35.0 41.0 31.0 41.0 40 36.361655896448774 39.0 35.0 41.0 30.0 41.0 41 36.14196063796354 39.0 35.0 40.0 30.0 41.0 42 36.19174752514142 39.0 35.0 41.0 30.0 41.0 43 36.17133976272785 39.0 35.0 40.0 30.0 41.0 44 36.184489904148336 38.0 35.0 40.0 30.0 41.0 45 36.16166129792583 38.0 35.0 40.0 30.0 41.0 46 36.05686773255814 38.0 35.0 40.0 30.0 41.0 47 36.0087233854494 38.0 35.0 40.0 30.0 41.0 48 35.90227009349466 38.0 35.0 40.0 30.0 41.0 49 35.8882876335638 38.0 35.0 40.0 30.0 41.0 50 35.76820788812068 38.0 35.0 40.0 29.0 41.0 51 34.60536317567568 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 19.0 9 31.0 10 40.0 11 21.0 12 15.0 13 19.0 14 28.0 15 40.0 16 60.0 17 112.0 18 182.0 19 294.0 20 506.0 21 844.0 22 1238.0 23 1701.0 24 2309.0 25 3042.0 26 3626.0 27 4374.0 28 4916.0 29 5697.0 30 7094.0 31 9046.0 32 12448.0 33 17858.0 34 31213.0 35 31318.0 36 34175.0 37 51549.0 38 85875.0 39 97590.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.545725958516655 20.733324167190446 23.25532291011942 12.465626964173476 2 33.77813678504085 24.891970458830922 23.467944688874923 17.8619480672533 3 33.52696810182275 24.240355908233816 25.739756835323696 16.492919154619738 4 29.593219673161535 24.496680546825896 25.873320631678187 20.03677914833438 5 26.32581709616593 29.505322910119418 24.03608186675047 20.132778126964173 6 25.947222658705215 34.57338152105594 24.45371425204274 15.025681568196102 7 79.0525809239472 6.004478315524827 10.192096165933377 4.750844594594595 8 79.84635252985544 6.483245600251414 8.897460323695789 4.7729415461973606 9 74.50822006599623 7.419174261470774 10.351194217473287 7.721411455059711 10 43.936350958516655 24.650131599622878 16.85334498742929 14.560172454431175 11 32.71208163104966 25.29339841294783 23.29755263984915 18.696967316153362 12 29.594938324952857 21.849220223130107 28.082524748585797 20.47331670333124 13 27.029727765556256 22.439454352608422 29.772204981143936 20.75861290069139 14 20.656721401634194 27.317724701445634 29.54264220615965 22.482911690760528 15 19.989884506599623 25.45568824638592 32.97650848522942 21.577918761785043 16 24.66780916090509 24.412712130735386 30.06192056882464 20.857558139534884 17 24.34494814582024 24.682049418604652 27.45497132306725 23.518031112507856 18 25.048367771841605 25.242329902576994 27.762118950345695 21.947183375235703 19 25.823725251414203 26.275239629164048 26.020633642363293 21.880401477058452 20 27.382787947831556 26.011303818353237 26.848532762413573 19.757375471401634 21 26.587297690131994 26.291935103708358 28.08375235700817 19.037014849151475 22 24.351577231301068 23.614275612822127 28.584862115022 23.449285040854807 23 24.234708909490887 25.743439660590823 28.504331002514142 21.51752042740415 24 23.906691939032054 25.33268188246386 27.898383485229417 22.86224269327467 25 24.033381128221247 26.706866750471402 26.310594751728473 22.94915736957888 26 22.94915736957888 26.507012099308614 26.566673868636077 23.97715666247643 27 24.120786847894408 25.56887374292898 27.963937774984288 22.346401634192333 28 21.707554211187933 27.061154541169074 28.263474230044 22.967817017598993 29 23.87551068510371 25.9938717787555 27.700738529226903 22.429879006913893 30 24.48735072281584 24.66584498742929 28.84609718730358 22.00070710245129 31 25.35134153048397 24.763808139534884 27.04863293526084 22.8362173947203 32 25.756943353236956 25.483432196731613 26.494736015084854 22.264888434946574 33 24.97913065681961 24.535227451288495 27.82178071967316 22.66386117221873 34 24.47261942174733 24.441438167818983 28.645997014456313 22.43994539597737 35 24.13429054054054 24.2494402105594 27.487380185417976 24.128889063482088 36 24.945248664362037 26.26738293526084 27.253889063482085 21.533479336895034 37 23.463770820238842 26.435074245757384 27.767274905719674 22.3338800282841 38 23.05497721558768 25.54432157448146 27.221971244500313 24.17872996543055 39 23.902763592080454 24.073155641106222 27.05133367379007 24.972747093023255 40 25.217286690760528 22.734325895663105 29.435594751728473 22.612792661847894 41 22.398452231301068 24.247476037083597 28.544351037083594 24.80972069453174 42 22.588731536769327 24.470655248271527 28.95191703331238 23.988696181646763 43 23.160060496543057 23.940573931489627 28.95780955373979 23.94155601822753 44 23.179947752985544 24.183149355751098 28.653853708359524 23.983049182903834 45 23.31694885292269 23.051294390320553 27.115414833438088 26.516341923318663 46 23.551667583280956 24.98477765556254 27.082269406033944 24.381285355122564 47 22.603217316153362 24.671246464487744 30.095065996228787 22.630470223130107 48 22.260223522941548 24.73753731929604 28.736594516027658 24.265644641734756 49 23.211129006913893 23.994834223758644 29.197438717787556 23.596598051539914 50 21.543545725958516 24.19542543997486 29.435349230044 24.82567960402263 51 21.203252671275926 23.745875235700815 28.07344044626021 26.977431646763044 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 167.0 1 406.5 2 646.0 3 1685.5 4 2725.0 5 1832.0 6 939.0 7 927.5 8 916.0 9 899.5 10 883.0 11 875.0 12 867.0 13 898.5 14 930.0 15 910.0 16 890.0 17 862.0 18 834.0 19 896.0 20 958.0 21 1061.0 22 1164.0 23 1345.0 24 1526.0 25 1721.0 26 2327.0 27 2738.0 28 3426.0 29 4114.0 30 5035.5 31 5957.0 32 6576.5 33 7196.0 34 8332.0 35 9468.0 36 10309.0 37 11150.0 38 11929.5 39 12709.0 40 14364.5 41 16020.0 42 17962.5 43 19905.0 44 21793.5 45 23682.0 46 29007.0 47 34332.0 48 34071.5 49 33811.0 50 34827.5 51 35844.0 52 32069.5 53 28295.0 54 26476.0 55 24657.0 56 24383.0 57 24109.0 58 23536.5 59 22964.0 60 21708.5 61 20453.0 62 18880.5 63 17308.0 64 14675.0 65 12042.0 66 10170.5 67 8299.0 68 7253.5 69 6208.0 70 5212.5 71 4217.0 72 3470.0 73 2723.0 74 2226.5 75 1342.5 76 955.0 77 745.5 78 536.0 79 415.0 80 294.0 81 214.5 82 135.0 83 91.0 84 47.0 85 29.5 86 12.0 87 9.5 88 7.0 89 8.0 90 9.0 91 6.0 92 3.0 93 3.0 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 407296.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.160757947988195 #Duplication Level Percentage of deduplicated Percentage of total 1 70.69092317738945 24.855464389600193 2 8.42936696662279 5.92765863136383 3 3.603248324512974 3.8007882649408415 4 2.323016811487236 3.2671612727124018 5 1.878626950207278 3.302697373540269 6 1.5174022091994128 3.2011807072441862 7 1.4143767127729725 3.48113900715572 8 1.2233275645512667 3.4410499510631194 9 1.181284742173116 3.738138019848053 >10 7.655226866554829 40.137295703543764 >50 0.05429131303987287 1.2933577959534883 >100 0.02397278757604776 1.6399390109703518 >500 0.0021152459625924497 0.5057408287799724 >1k 0.0028203279501232657 1.408389043283835 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTC 1670 0.41002121307353867 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1565 0.38424143620364554 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGC 1267 0.311075974230044 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCG 1179 0.2894700659962288 No Hit GCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 899 0.22072399434318038 No Hit CCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 618 0.15173240100565683 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 523 0.1284078409805154 No Hit CGCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTG 428 0.10508328095537398 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09845419547454431 0.0 2 0.0 0.0 0.0 0.5632267441860465 0.0 3 0.0 0.0 0.0 0.7969633878064111 0.0 4 0.0 0.0 0.0 1.1429034412319297 0.0 5 0.0 0.0 0.0 2.3263179604022626 0.0 6 0.0 0.0 0.0 2.9963466373350096 0.0 7 0.0 0.0 0.0 3.5632562067881834 0.0 8 0.0 0.0 0.0 4.312342866121936 0.0 9 0.0 0.0 0.0 4.601321888749214 0.0 10 0.0 0.0 0.0 5.484463387806411 0.0 11 0.0 0.0 0.0 6.359748192960402 0.0 12 0.0 0.0 0.0 7.362213230672533 0.0 13 0.0 0.0 0.0 7.682373507228158 0.0 14 0.0 0.0 0.0 7.832141734758014 0.0 15 0.0 0.0 0.0 8.077172375864237 0.0 16 0.0 0.0 0.0 8.504871150219987 0.0 17 0.0 0.0 0.0 8.99247721558768 0.0 18 0.0 0.0 0.0 9.555212916404777 0.0 19 0.0 0.0 0.0 9.932579745443118 0.0 20 0.0 0.0 0.0 10.282202624135763 0.0 21 0.0 0.0 0.0 10.683630578252671 0.0 22 0.0 0.0 0.0 11.140791954745444 0.0 23 0.0 0.0 0.0 11.571436989314897 0.0 24 0.0 0.0 0.0 11.902645741671904 0.0 25 0.0 0.0 0.0 12.221578409805154 0.0 26 0.0 0.0 0.0 12.527743950345695 0.0 27 0.0 0.0 0.0 12.866072831552483 0.0 28 0.0 0.0 0.0 13.188442803268385 0.0 29 0.0 0.0 0.0 13.52898137963545 0.0 30 0.0 0.0 0.0 13.961590587680703 0.0 31 0.0 0.0 0.0 14.299919468887492 0.0 32 2.4552168447517284E-4 0.0 0.0 14.648805782526713 0.0 33 2.4552168447517284E-4 0.0 0.0 14.980505578252671 0.0 34 2.4552168447517284E-4 0.0 0.0 15.318588937774985 0.0 35 2.4552168447517284E-4 0.0 0.0 15.701111722187303 0.0 36 2.4552168447517284E-4 0.0 0.0 16.052453252671278 0.0 37 2.4552168447517284E-4 0.0 0.0 16.43571260213702 0.0 38 2.4552168447517284E-4 0.0 0.0 16.82682864550597 0.0 39 2.4552168447517284E-4 0.0 0.0 17.42000903519799 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 20 7.027915E-4 45.000004 1 CTCACGA 40 6.7957444E-9 45.000004 24 ACTTCGT 20 7.027915E-4 45.000004 30 CACGACG 35 1.2093369E-7 45.0 26 CGAATGG 75 0.0 42.0 2 CGATGAA 190 0.0 40.263157 19 TCACGAC 45 1.9230356E-8 40.0 25 TCTAGCG 40 3.4508957E-7 39.375004 1 TACGAAT 40 3.4508957E-7 39.375004 12 TACGGGT 35 6.2383588E-6 38.571426 4 TCTCGTA 35 6.2383588E-6 38.571426 28 ATGGGAC 165 0.0 38.181816 5 AACGAAT 65 9.094947E-12 38.07692 24 AAACGGG 95 0.0 37.894737 3 GTAGGGT 125 0.0 37.8 4 GTCGAGG 30 1.1386278E-4 37.500004 2 CGGCCTA 30 1.1386278E-4 37.500004 44 TAGCACG 30 1.1386278E-4 37.500004 1 TATACGG 30 1.1386278E-4 37.500004 2 AACACGT 30 1.1386278E-4 37.500004 41 >>END_MODULE