##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935559.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 372857 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.172672096809233 31.0 31.0 33.0 28.0 34.0 2 31.180398919693072 31.0 31.0 34.0 28.0 34.0 3 30.980335624649666 31.0 31.0 34.0 27.0 34.0 4 34.82149993160917 35.0 35.0 37.0 32.0 37.0 5 34.834250128065186 35.0 35.0 37.0 33.0 37.0 6 35.02730269245314 36.0 35.0 37.0 32.0 37.0 7 35.52074924166637 37.0 35.0 37.0 33.0 37.0 8 35.258715807937094 37.0 35.0 37.0 32.0 37.0 9 37.14393721989932 39.0 37.0 39.0 34.0 39.0 10 36.315995140228026 38.0 35.0 39.0 32.0 39.0 11 36.59708681880721 38.0 35.0 39.0 32.0 39.0 12 36.71956809178854 39.0 35.0 39.0 33.0 39.0 13 36.75478534666105 39.0 35.0 39.0 33.0 39.0 14 37.788822524453074 40.0 37.0 41.0 33.0 41.0 15 38.005476630450815 40.0 37.0 41.0 33.0 41.0 16 37.94183292790534 39.0 37.0 41.0 33.0 41.0 17 37.856438259171746 39.0 36.0 41.0 33.0 41.0 18 37.871049759022895 39.0 37.0 41.0 33.0 41.0 19 37.73873898035976 39.0 36.0 41.0 33.0 41.0 20 37.84996392718924 39.0 36.0 41.0 33.0 41.0 21 37.77541792161606 39.0 36.0 41.0 33.0 41.0 22 37.8890271605468 40.0 36.0 41.0 33.0 41.0 23 37.91191529192157 40.0 36.0 41.0 34.0 41.0 24 37.898617968819146 40.0 36.0 41.0 33.0 41.0 25 37.44393963369335 39.0 35.0 41.0 33.0 41.0 26 37.56784236315799 39.0 36.0 41.0 33.0 41.0 27 37.62038261317341 39.0 36.0 41.0 33.0 41.0 28 37.559528183727274 40.0 36.0 41.0 33.0 41.0 29 37.54714273836886 40.0 36.0 41.0 33.0 41.0 30 37.25304339197065 39.0 35.0 41.0 32.0 41.0 31 37.26353266802018 39.0 35.0 41.0 32.0 41.0 32 37.26092040648292 39.0 35.0 41.0 33.0 41.0 33 37.25868898800344 39.0 35.0 41.0 33.0 41.0 34 37.18899470842709 39.0 35.0 41.0 32.0 41.0 35 37.21704835902236 40.0 35.0 41.0 32.0 41.0 36 37.0562011709583 39.0 35.0 41.0 32.0 41.0 37 37.069774739377294 39.0 35.0 41.0 32.0 41.0 38 36.89767122516139 39.0 35.0 41.0 31.0 41.0 39 36.80506467626999 39.0 35.0 41.0 31.0 41.0 40 36.70966617228589 39.0 35.0 41.0 31.0 41.0 41 36.55317185945282 39.0 35.0 41.0 31.0 41.0 42 36.58775616389125 39.0 35.0 41.0 31.0 41.0 43 36.58070520333533 39.0 35.0 41.0 31.0 41.0 44 36.56465079105394 39.0 35.0 41.0 31.0 41.0 45 36.53722204491266 39.0 35.0 41.0 31.0 41.0 46 36.4061074352902 39.0 35.0 40.0 31.0 41.0 47 36.37562121671311 39.0 35.0 40.0 31.0 41.0 48 36.30108862110675 38.0 35.0 40.0 31.0 41.0 49 36.27639550819751 38.0 35.0 40.0 31.0 41.0 50 36.17119163647189 38.0 35.0 40.0 31.0 41.0 51 34.981867042860934 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 13.0 9 22.0 10 34.0 11 15.0 12 16.0 13 17.0 14 27.0 15 31.0 16 49.0 17 85.0 18 141.0 19 209.0 20 423.0 21 630.0 22 930.0 23 1312.0 24 1715.0 25 2335.0 26 2994.0 27 3420.0 28 3920.0 29 4606.0 30 5796.0 31 7575.0 32 10023.0 33 14920.0 34 26704.0 35 29682.0 36 31555.0 37 47876.0 38 82674.0 39 93097.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.39702888775053 20.361961824506448 23.062192744135153 11.178816543607871 2 34.143652928602656 23.842921012613417 24.370737306795903 17.64268875198803 3 33.189936088098115 23.927672002939467 26.08319007018777 16.799201838774653 4 29.448018945601127 25.609550041973193 25.285028844838635 19.657402167587037 5 24.883534438135797 30.227406217397018 24.517710543184116 20.371348801283066 6 26.08453106687014 35.591392946893855 23.799740919440964 14.524335066795043 7 80.00520306712761 6.036898864712209 9.268969068570525 4.688928999589655 8 80.45524155373239 6.255213124602729 8.308010845981167 4.9815344756837066 9 74.46876416427746 7.533182962905349 10.780808728279206 7.217244144537986 10 40.730360433088286 24.77598650420939 18.980467042324538 15.513186020377786 11 31.458441171816542 26.051006149810785 23.493993675859645 18.996559002513028 12 28.3993595399845 22.50380172559453 29.066103090460953 20.030735643960018 13 26.243036874726773 24.601120536827793 29.833153192779 19.322689395666433 14 21.685793749346264 28.13089200417318 28.260432283690527 21.922881962790026 15 20.559624735488406 26.479052290824633 32.19572114778588 20.765601825901083 16 23.42050705766554 24.39004765902209 30.88181259839563 21.30763268491674 17 23.514108626095258 25.128132233000855 27.55479982942522 23.802959311478663 18 24.313879047463235 24.939588099459044 28.790394172564817 21.956138680512904 19 25.105067090064022 26.902539043118406 26.293190150647565 21.699203716170008 20 26.2811211805062 25.93273024242538 27.350163735694917 20.435984841373504 21 25.196254864465466 27.002577395623522 27.781696468082938 20.019471271828074 22 23.745564653473046 25.10238509669927 27.407558393700533 23.744491856127148 23 23.05039197333026 26.917021807288048 27.084378193248348 22.948208026133344 24 23.77506658048528 24.984645587986815 28.551428563765736 22.688859267762172 25 22.24177097385861 26.683151985881988 27.451006686209457 23.624070354049945 26 21.65521902498813 27.182539150398142 28.163075924550164 22.999165900063563 27 22.275027691581492 27.12487629305605 28.216447592508658 22.383648422853803 28 21.13330311620809 26.90656203316553 28.856103010001156 23.10403184062523 29 22.269663704851993 25.753304886323715 28.37763539373004 23.59939601509426 30 23.1501621264989 26.466983320683262 27.53951246724616 22.84334208557168 31 23.64874469300563 27.127290087084326 24.96613983377005 24.257825386139995 32 24.943611089506167 27.42794154327262 25.06644638561164 22.56200098160957 33 24.09905137894689 27.03556591400993 26.15989508041957 22.70548762662361 34 22.776560450789447 25.905910308777898 27.357136918443263 23.960392321989396 35 22.984414936557446 26.08319007018777 26.73303706246631 24.19935793078848 36 22.48368677535892 28.57288451068372 26.149435306297054 22.79399340766031 37 23.33361047264769 28.562424736561205 26.337979439838865 21.765985350952242 38 22.874185009266288 27.75299913908013 25.063227993573946 24.309587858079638 39 24.277135738366184 25.648170746425574 26.981389648042008 23.09330386716623 40 23.84479840796874 25.075565163051788 28.40445532737752 22.675181101601954 41 21.17648320938054 27.375106273987075 27.060776651638562 24.38763386499382 42 21.88989344440362 27.94744365802439 26.33824763917534 23.82441525839665 43 22.776828650125918 26.40744306798585 26.938477754206037 23.877250527682197 44 22.064759411785214 25.97591033559783 27.052998870880796 24.90633138173616 45 22.802843985763978 25.1383238077869 26.384646124385487 25.67418608206363 46 23.525641197563676 26.830929820279625 26.46242393196319 23.181005050193505 47 21.82847579635088 26.937941355533084 28.031121851004542 23.202460997111494 48 22.09828432884457 25.70100601571112 27.733420587517465 24.467289067926846 49 22.418246137259057 24.528170317306635 29.297559117838745 23.756024427595566 50 21.377900911073148 24.82050759406421 28.975719914068932 24.82587158079371 51 20.93939499593678 25.23407097090842 26.533496756129026 27.29303727702578 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 109.0 1 343.0 2 577.0 3 1029.0 4 1481.0 5 1089.5 6 698.0 7 690.0 8 682.0 9 666.5 10 651.0 11 648.5 12 646.0 13 707.0 14 768.0 15 762.5 16 757.0 17 798.5 18 840.0 19 799.5 20 759.0 21 986.0 22 1213.0 23 1330.5 24 1448.0 25 1646.0 26 2254.5 27 2665.0 28 3131.0 29 3597.0 30 4488.0 31 5379.0 32 6023.5 33 6668.0 34 7593.5 35 8519.0 36 9675.5 37 10832.0 38 11781.5 39 12731.0 40 14958.5 41 17186.0 42 18676.0 43 20166.0 44 22337.0 45 24508.0 46 28989.5 47 33471.0 48 34346.5 49 35222.0 50 35012.0 51 34802.0 52 31683.0 53 28564.0 54 25743.5 55 22923.0 56 21359.5 57 19796.0 58 18533.0 59 17270.0 60 16815.0 61 16360.0 62 14347.5 63 12335.0 64 10708.5 65 9082.0 66 7640.5 67 6199.0 68 5297.5 69 4396.0 70 3668.0 71 2940.0 72 2515.0 73 2090.0 74 1675.0 75 1014.5 76 769.0 77 537.5 78 306.0 79 250.5 80 195.0 81 144.5 82 94.0 83 63.5 84 33.0 85 22.5 86 12.0 87 11.0 88 10.0 89 6.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 372857.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.73507133627438 #Duplication Level Percentage of deduplicated Percentage of total 1 72.90348477395389 26.781147138341893 2 8.798511381724436 6.464278865213384 3 3.387175063046514 3.732843527083901 4 2.055171482437774 3.019874840625136 5 1.4953379391592925 2.7465672933427068 6 1.281426229618839 2.82439703743327 7 1.1167644840033086 2.8717096089975436 8 0.9576495005685498 2.814345817482657 9 0.9107255150060084 3.011001008535985 >10 7.011166531955817 41.43356383436409 >50 0.05116014952912974 1.2371635699378036 >100 0.026310934043552437 1.5421587555821927 >500 0.004385155673925406 1.203066396894813 >1k 7.308592789875678E-4 0.3178823061645745 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC 1184 0.3175480143862124 No Hit GAATCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTC 929 0.2491571835851278 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGC 827 0.22180085126469398 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCG 762 0.20436789439382927 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 732 0.19632191429958404 No Hit CCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC 720 0.19310352226188593 No Hit CTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGCT 511 0.13704986093864405 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.681993364748416E-4 0.0 0.0 0.14482764169641443 0.0 2 2.681993364748416E-4 0.0 0.0 0.8298087470531598 0.0 3 2.681993364748416E-4 0.0 0.0 1.1057858642857719 0.0 4 2.681993364748416E-4 0.0 0.0 1.5043300782873863 0.0 5 2.681993364748416E-4 0.0 0.0 2.720345869864318 0.0 6 2.681993364748416E-4 0.0 0.0 3.4061315732304878 0.0 7 2.681993364748416E-4 0.0 0.0 3.9773961599219003 0.0 8 2.681993364748416E-4 0.0 0.0 4.881227923842117 0.0 9 2.681993364748416E-4 0.0 0.0 5.165787419841923 0.0 10 2.681993364748416E-4 0.0 0.0 6.111994678925164 0.0 11 2.681993364748416E-4 0.0 0.0 7.326133075146772 0.0 12 2.681993364748416E-4 0.0 0.0 8.42843234805837 0.0 13 2.681993364748416E-4 0.0 0.0 8.855137492389844 0.0 14 2.681993364748416E-4 0.0 0.0 9.042608828585758 0.0 15 2.681993364748416E-4 0.0 0.0 9.388049573965354 0.0 16 2.681993364748416E-4 0.0 0.0 10.058547915152458 0.0 17 2.681993364748416E-4 0.0 0.0 10.828011811498778 0.0 18 2.681993364748416E-4 0.0 0.0 11.671498724712155 0.0 19 2.681993364748416E-4 0.0 0.0 12.175981676621332 0.0 20 2.681993364748416E-4 0.0 0.0 12.675368841137487 0.0 21 2.681993364748416E-4 0.0 0.0 13.238051049061704 0.0 22 2.681993364748416E-4 0.0 0.0 13.888970838686145 0.0 23 2.681993364748416E-4 0.0 0.0 14.52299407011267 0.0 24 2.681993364748416E-4 0.0 0.0 15.009507666478033 0.0 25 2.681993364748416E-4 0.0 0.0 15.475638113271307 0.0 26 2.681993364748416E-4 0.0 0.0 15.903147855612206 0.0 27 2.681993364748416E-4 0.0 0.0 16.32609820923303 0.0 28 2.681993364748416E-4 0.0 0.0 16.775600297164864 0.0 29 2.681993364748416E-4 0.0 0.0 17.216520006329503 0.0 30 2.681993364748416E-4 0.0 0.0 17.688550838525227 0.0 31 2.681993364748416E-4 0.0 0.0 18.158704275365622 0.0 32 2.681993364748416E-4 0.0 0.0 18.61169295467163 0.0 33 2.681993364748416E-4 0.0 0.0 19.076750604119006 0.0 34 5.363986729496832E-4 0.0 0.0 19.5128427252271 0.0 35 5.363986729496832E-4 0.0 0.0 19.993455936190013 0.0 36 8.045980094245246E-4 0.0 0.0 20.444299020804223 0.0 37 0.0010727973458993663 0.0 0.0 20.863226384377924 0.0 38 0.0010727973458993663 0.0 0.0 21.309510080272062 0.0 39 0.0013409966823742078 0.0 0.0 21.768935543653466 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTTA 20 7.0271484E-4 45.000004 6 CGATTGT 20 7.0271484E-4 45.000004 10 TATGCGG 40 6.7939254E-9 45.000004 2 CGTTAGG 60 0.0 45.000004 2 ATGCGCG 30 2.1615415E-6 45.000004 1 TGCGTAG 40 6.7939254E-9 45.000004 1 GCGAAAG 25 3.8857186E-5 45.0 1 GCGTTAG 50 2.1827873E-11 45.0 1 ACGGGCG 70 0.0 41.785717 5 CGAATAT 45 1.922308E-8 40.0 14 GCTACGA 45 1.922308E-8 40.0 10 GGCGATA 130 0.0 39.80769 8 AAATCGA 40 3.4498407E-7 39.375004 15 CGTTGAT 40 3.4498407E-7 39.375004 25 CACGAGG 40 3.4498407E-7 39.375004 2 CGCAAGG 80 0.0 39.375004 2 TAATCGT 40 3.4498407E-7 39.375004 21 TCGTCTG 75 0.0 39.0 18 ATGGGCG 105 0.0 38.57143 5 TTTCGTC 70 0.0 38.57143 16 >>END_MODULE