##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935553.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 241320 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.08442731642632 31.0 31.0 33.0 28.0 34.0 2 31.089122327200396 31.0 31.0 34.0 28.0 34.0 3 30.903936681584618 31.0 30.0 34.0 27.0 34.0 4 34.75721448698823 35.0 35.0 37.0 32.0 37.0 5 34.77105917454003 35.0 35.0 37.0 32.0 37.0 6 34.955730979612134 36.0 35.0 37.0 32.0 37.0 7 35.390274324548315 37.0 35.0 37.0 33.0 37.0 8 35.03070197248467 37.0 35.0 37.0 32.0 37.0 9 36.87235206364993 39.0 37.0 39.0 32.0 39.0 10 36.3004682579148 37.0 35.0 39.0 32.0 39.0 11 36.56397729156307 38.0 35.0 39.0 32.0 39.0 12 36.65907923089674 39.0 35.0 39.0 33.0 39.0 13 36.65547405934029 39.0 35.0 39.0 33.0 39.0 14 37.63940411072435 39.0 36.0 41.0 33.0 41.0 15 37.88520222111719 40.0 37.0 41.0 33.0 41.0 16 37.85374191944306 39.0 36.0 41.0 33.0 41.0 17 37.7702635504724 39.0 36.0 41.0 33.0 41.0 18 37.77227333001823 39.0 36.0 41.0 33.0 41.0 19 37.65528344107409 39.0 36.0 41.0 33.0 41.0 20 37.72435769932041 39.0 36.0 41.0 33.0 41.0 21 37.64942814520139 39.0 36.0 41.0 33.0 41.0 22 37.77358693850489 39.0 36.0 41.0 33.0 41.0 23 37.83908503232223 40.0 36.0 41.0 33.0 41.0 24 37.82994778717056 40.0 36.0 41.0 33.0 41.0 25 37.37369467926405 39.0 35.0 41.0 32.0 41.0 26 37.49099535885961 39.0 35.0 41.0 33.0 41.0 27 37.53132769766285 39.0 36.0 41.0 33.0 41.0 28 37.39509779545831 39.0 35.0 41.0 33.0 41.0 29 37.35704458809879 39.0 35.0 41.0 33.0 41.0 30 37.097020553621746 39.0 35.0 41.0 32.0 41.0 31 37.13116608652412 39.0 35.0 41.0 32.0 41.0 32 37.14919608818167 39.0 35.0 41.0 32.0 41.0 33 37.15071689043594 39.0 35.0 41.0 32.0 41.0 34 37.065527100944806 39.0 35.0 41.0 32.0 41.0 35 37.094099121498424 40.0 35.0 41.0 32.0 41.0 36 36.96564312945467 39.0 35.0 41.0 31.0 41.0 37 36.96916542350406 39.0 35.0 41.0 32.0 41.0 38 36.79411155312448 39.0 35.0 41.0 31.0 41.0 39 36.708685562738275 39.0 35.0 41.0 31.0 41.0 40 36.611602850986245 39.0 35.0 41.0 31.0 41.0 41 36.38199486159456 39.0 35.0 41.0 30.0 41.0 42 36.44737278302669 39.0 35.0 41.0 30.0 41.0 43 36.423520636499255 39.0 35.0 41.0 31.0 41.0 44 36.44017487153987 39.0 35.0 41.0 31.0 41.0 45 36.42449444720703 39.0 35.0 41.0 31.0 41.0 46 36.2751906182662 39.0 35.0 40.0 30.0 41.0 47 36.24557848499917 38.0 35.0 40.0 30.0 41.0 48 36.170959721531574 38.0 35.0 40.0 30.0 41.0 49 36.12448201558097 38.0 35.0 40.0 30.0 41.0 50 35.98466766119675 38.0 35.0 40.0 30.0 41.0 51 34.809709099950275 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 21.0 10 18.0 11 13.0 12 19.0 13 13.0 14 13.0 15 17.0 16 33.0 17 49.0 18 89.0 19 166.0 20 297.0 21 492.0 22 669.0 23 952.0 24 1260.0 25 1672.0 26 2068.0 27 2416.0 28 2770.0 29 3231.0 30 3933.0 31 5210.0 32 6865.0 33 10041.0 34 17352.0 35 19200.0 36 20611.0 37 30628.0 38 52800.0 39 58384.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.35728493286922 20.615365489806067 22.661611138736948 12.365738438587767 2 32.979031990717715 24.966434609646942 23.46800928228079 18.58652411735455 3 32.34336151168573 24.860351400629867 25.344356041770265 17.45193104591414 4 29.592242665340628 24.490717719211005 26.155312448201556 19.76172716724681 5 26.26098126968341 29.988397149013757 23.59895574341124 20.151665837891596 6 24.84211834908006 35.18191612796287 24.26031824962705 15.715647273330019 7 76.64760484004641 6.836979943643295 11.080722691861428 5.434692524448865 8 76.28128625890933 7.696419691695673 9.510193933366484 6.512100116028511 9 69.75012431626057 9.127714238355711 12.314768771755345 8.807392673628376 10 39.2864246643461 28.02254268191613 18.468838057351235 14.222194596386542 11 31.357947952925574 25.976297032985247 23.880324879827615 18.78543013426156 12 29.6278799933698 21.31609481186806 28.966517487153986 20.089507707608156 13 25.22003978120338 25.41604508536383 28.97024697497099 20.393668158461793 14 18.986408088844687 30.454583126139568 27.824879827614783 22.734128957400962 15 18.257500414387533 26.80672965357202 34.45342284104094 20.482347090999504 16 20.196834079230896 25.6592905685397 31.580888446875516 22.56298690535389 17 20.200977954583127 25.17362837725841 27.846427979446382 26.77896568871208 18 22.582463119509367 25.58925907508702 29.122327200397812 22.7059506050058 19 24.82098458478369 26.444969335322394 26.112216144538376 22.621829935355546 20 27.039615448367314 24.579396651748716 28.10086192607326 20.28012597381071 21 24.402038786673298 27.238521465274324 27.58619260732637 20.773247140726006 22 21.930217139068457 25.889690038123653 27.273744405768273 24.906348417039613 23 22.5451682413393 26.229902204541688 27.20246974970993 24.02245980440908 24 22.877921432123323 24.93079728161777 28.45474888115366 23.736532405105255 25 21.70230399469584 27.53149345267694 26.328526437924747 24.43767611470247 26 21.891679098292723 26.840295043925078 26.888363998010938 24.37966185977126 27 23.089673462622244 27.083540527100947 26.472318912647108 23.3544670976297 28 20.174871539864082 27.834410740924913 28.680590087850156 23.31012763136085 29 22.50290071274656 25.192690203878666 28.050721034311287 24.253688049063484 30 21.94057682744903 25.633184153820654 27.624316260566882 24.801922758163432 31 23.700066302005634 26.075750041438756 25.92325542847671 24.3009282280789 32 23.79496104757169 27.645864412398474 25.418945798110393 23.140228741919444 33 22.50994530084535 25.609564064312945 26.561826620255264 25.31866401458644 34 21.301176860600034 25.16368307641306 29.142217802088517 24.39292226089839 35 21.44414056025195 26.001574672633847 26.589176197579977 25.96510856953423 36 22.539781203381402 26.708519807724183 27.49295541190121 23.258743576993204 37 20.804326205867728 26.933946626885465 28.67105917454003 23.59066799270678 38 20.173628377258414 27.53107906514172 25.994530084535057 26.300762473064808 39 22.996436267197083 23.128211503397978 27.99767942980275 25.877672799602188 40 22.77349577324714 23.70338140228742 29.521796784352727 24.001326040112716 41 19.262390187303165 25.263964859937012 29.81808387203713 25.655561080722695 42 21.88960716061661 25.57351234874855 28.538869550803913 23.99801093983093 43 22.52693518978949 24.729404939499418 28.274075915796455 24.469583954914636 44 20.950190618266202 24.397066136250622 28.167578319244157 26.48516492623902 45 21.54773744405768 23.438173379744736 26.625642300679598 28.388446875517985 46 21.50091165257749 26.427150671307807 27.052461461959226 25.01947621415548 47 20.609149676777722 24.305900878501575 30.835405271009446 24.249544173711254 48 20.600861926073264 23.705867727498756 29.498591082380244 26.19467926404774 49 20.921183490800598 22.964114039449694 31.337228576164428 24.77747389358528 50 19.563649925410243 23.330432620586773 30.474888115365488 26.631029338637497 51 19.616277142383556 22.908171722194595 28.165506381568044 29.310044753853802 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 141.0 1 264.0 2 387.0 3 781.5 4 1176.0 5 815.5 6 455.0 7 476.0 8 497.0 9 476.0 10 455.0 11 461.5 12 468.0 13 487.0 14 506.0 15 471.0 16 436.0 17 456.0 18 476.0 19 521.5 20 567.0 21 537.5 22 508.0 23 651.5 24 795.0 25 984.0 26 1500.5 27 1828.0 28 2329.5 29 2831.0 30 3222.0 31 3613.0 32 3931.0 33 4249.0 34 4968.0 35 5687.0 36 6242.5 37 6798.0 38 7212.0 39 7626.0 40 8959.0 41 10292.0 42 11476.5 43 12661.0 44 14236.5 45 15812.0 46 19302.0 47 22792.0 48 23649.0 49 24506.0 50 23983.5 51 23461.0 52 20783.5 53 18106.0 54 16196.5 55 14287.0 56 13324.5 57 12362.0 58 11373.5 59 10385.0 60 10786.0 61 11187.0 62 10026.5 63 8866.0 64 7228.0 65 5590.0 66 4589.5 67 3589.0 68 3068.0 69 2547.0 70 2214.5 71 1882.0 72 1463.0 73 1044.0 74 829.5 75 510.0 76 405.0 77 254.0 78 103.0 79 90.5 80 78.0 81 62.0 82 46.0 83 32.0 84 18.0 85 11.5 86 5.0 87 3.5 88 2.0 89 1.5 90 1.0 91 1.5 92 2.0 93 3.0 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 241320.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.29769600530416 #Duplication Level Percentage of deduplicated Percentage of total 1 73.68426747457261 28.219376761147025 2 9.73598788141095 7.457318083872037 3 3.4905864531486688 4.010442565887618 4 1.83510062756979 2.8112050389524286 5 1.3492750486907594 2.583706282115034 6 1.0430642718026402 2.396817503729488 7 0.9381086344946981 2.514917951268026 8 0.8147587102358796 2.496270512182994 9 0.7909543388876866 2.7262555942317257 >10 6.209694871239992 38.494115696999835 >50 0.06816706340618914 1.8046577158959058 >100 0.032460506383899586 2.1411403944969334 >500 0.005410084397316598 1.420934858279463 >1k 0.002164033758926639 0.9228410409414886 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC 1191 0.4935355544505221 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTC 1036 0.42930548649096634 No Hit CCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC 829 0.3435272666998177 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGC 773 0.32032156472733303 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCG 702 0.29090004972650424 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 579 0.23993038289408256 No Hit CTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGCT 546 0.22625559423172548 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTT 429 0.17777225261064147 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 329 0.1363334990883474 No Hit TCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC 313 0.12970329852478038 No Hit CGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTG 253 0.10484004641140394 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.28775070445881E-4 0.0 0.0 0.23537212000663021 0.0 2 8.28775070445881E-4 0.0 0.0 1.3355710260235372 0.0 3 8.28775070445881E-4 0.0 0.0 1.7731642632189624 0.0 4 8.28775070445881E-4 0.0 0.0 2.388115365489806 0.0 5 8.28775070445881E-4 0.0 0.0 4.161694016243992 0.0 6 8.28775070445881E-4 0.0 0.0 5.090336482678601 0.0 7 8.28775070445881E-4 0.0 0.0 5.869799436432952 0.0 8 8.28775070445881E-4 0.0 0.0 7.042101773578651 0.0 9 8.28775070445881E-4 0.0 0.0 7.421680755842864 0.0 10 8.28775070445881E-4 0.0 0.0 8.627548483341622 0.0 11 8.28775070445881E-4 0.0 0.0 10.065473230565225 0.0 12 8.28775070445881E-4 0.0 0.0 11.558097132438256 0.0 13 8.28775070445881E-4 0.0 0.0 12.209514337808718 0.0 14 8.28775070445881E-4 0.0 0.0 12.51698988894414 0.0 15 8.28775070445881E-4 0.0 0.0 12.95789822642135 0.0 16 8.28775070445881E-4 0.0 0.0 13.718299353555444 0.0 17 8.28775070445881E-4 0.0 0.0 14.604259903862092 0.0 18 8.28775070445881E-4 0.0 0.0 15.565638985579314 0.0 19 8.28775070445881E-4 0.0 0.0 16.20338140228742 0.0 20 8.28775070445881E-4 0.0 0.0 16.76570528758495 0.0 21 8.28775070445881E-4 0.0 0.0 17.445715232885796 0.0 22 8.28775070445881E-4 0.0 0.0 18.155975468257914 0.0 23 8.28775070445881E-4 0.0 0.0 18.856290402784683 0.0 24 8.28775070445881E-4 0.0 0.0 19.397066136250622 0.0 25 8.28775070445881E-4 0.0 0.0 19.87195425161611 0.0 26 8.28775070445881E-4 0.0 0.0 20.378335819658545 0.0 27 8.28775070445881E-4 0.0 0.0 20.83001823305155 0.0 28 8.28775070445881E-4 0.0 0.0 21.260566882148186 0.0 29 8.28775070445881E-4 0.0 0.0 21.74332836068291 0.0 30 8.28775070445881E-4 0.0 0.0 22.324299685065473 0.0 31 8.28775070445881E-4 0.0 0.0 22.841455329023702 0.0 32 8.28775070445881E-4 0.0 0.0 23.312613956572186 0.0 33 8.28775070445881E-4 0.0 0.0 23.80366318581137 0.0 34 8.28775070445881E-4 0.0 0.0 24.313359854135587 0.0 35 8.28775070445881E-4 0.0 0.0 24.848334162108404 0.0 36 8.28775070445881E-4 0.0 0.0 25.338969003812366 0.0 37 8.28775070445881E-4 0.0 0.0 25.844936184319575 0.0 38 8.28775070445881E-4 0.0 0.0 26.32479695010774 0.0 39 8.28775070445881E-4 0.0 0.0 26.83366484336151 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGGCG 25 3.8816186E-5 45.0 5 GAATGAC 25 3.8816186E-5 45.0 1 CGACCGT 20 7.022199E-4 45.0 14 CGTCTCG 20 7.022199E-4 45.0 42 TCTAGAC 20 7.022199E-4 45.0 19 TAGCACG 20 7.022199E-4 45.0 21 GTAGACG 25 3.8816186E-5 45.0 1 ATGACGG 25 3.8816186E-5 45.0 2 TCGTAGG 25 3.8816186E-5 45.0 2 CAGTACG 20 7.022199E-4 45.0 1 CGATAGG 20 7.022199E-4 45.0 2 AGTACGG 20 7.022199E-4 45.0 2 GTCGATG 30 2.1583528E-6 44.999996 1 TGCGTAG 30 2.1583528E-6 44.999996 1 CCGATGA 155 0.0 42.096775 18 CTACGAA 60 3.6379788E-12 41.249996 11 TACGAAT 60 3.6379788E-12 41.249996 12 CGAATAT 55 6.002665E-11 40.909092 14 CGATGAA 165 0.0 40.90909 19 CCCTAGC 50 1.0732037E-9 40.5 21 >>END_MODULE