##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935550.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 153932 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.15846607592963 31.0 31.0 33.0 28.0 34.0 2 31.134299560845047 31.0 31.0 34.0 28.0 34.0 3 30.935166177273082 31.0 30.0 34.0 27.0 34.0 4 34.81853675648988 35.0 35.0 37.0 32.0 37.0 5 34.84138450744484 35.0 35.0 37.0 33.0 37.0 6 35.01022529428579 36.0 35.0 37.0 32.0 37.0 7 35.47525530753839 37.0 35.0 37.0 33.0 37.0 8 35.23345373281709 37.0 35.0 37.0 32.0 37.0 9 37.02880492685082 39.0 37.0 39.0 33.0 39.0 10 36.426584465868046 38.0 35.0 39.0 32.0 39.0 11 36.62678325494374 39.0 35.0 39.0 32.0 39.0 12 36.62595171894083 39.0 35.0 39.0 33.0 39.0 13 36.58152301016033 39.0 35.0 39.0 32.0 39.0 14 37.5400566483902 39.0 36.0 41.0 33.0 41.0 15 37.71465322350129 39.0 36.0 41.0 33.0 41.0 16 37.72778239742224 39.0 36.0 41.0 33.0 41.0 17 37.67594782111582 39.0 36.0 41.0 33.0 41.0 18 37.684126757269446 39.0 36.0 41.0 33.0 41.0 19 37.55058727230205 39.0 36.0 40.0 33.0 41.0 20 37.6493711508978 39.0 36.0 41.0 33.0 41.0 21 37.64066600836733 39.0 35.0 41.0 33.0 41.0 22 37.74580983811033 39.0 36.0 41.0 33.0 41.0 23 37.82796949302289 39.0 36.0 41.0 34.0 41.0 24 37.75812046877842 40.0 35.0 41.0 33.0 41.0 25 37.42518124886313 39.0 35.0 41.0 33.0 41.0 26 37.49262661434919 39.0 35.0 41.0 33.0 41.0 27 37.53859496401008 39.0 35.0 41.0 33.0 41.0 28 37.42594782111582 39.0 35.0 41.0 33.0 41.0 29 37.45813735935348 39.0 35.0 41.0 33.0 41.0 30 37.201114777953904 39.0 35.0 41.0 32.0 41.0 31 37.101012135228544 39.0 35.0 41.0 32.0 41.0 32 37.09324896707637 39.0 35.0 41.0 32.0 41.0 33 37.10667697424837 39.0 35.0 41.0 32.0 41.0 34 36.98145284931009 39.0 35.0 41.0 32.0 41.0 35 37.05636254969727 39.0 35.0 41.0 32.0 41.0 36 36.86891614479121 39.0 35.0 41.0 31.0 41.0 37 36.8195436946184 39.0 35.0 41.0 31.0 41.0 38 36.61877972091573 39.0 35.0 41.0 31.0 41.0 39 36.66281215081984 39.0 35.0 41.0 31.0 41.0 40 36.63967855936387 39.0 35.0 41.0 31.0 41.0 41 36.50600265052101 39.0 35.0 40.0 31.0 41.0 42 36.536054881376195 39.0 35.0 40.0 31.0 41.0 43 36.439180937037136 39.0 35.0 40.0 31.0 41.0 44 36.428526881999844 39.0 35.0 40.0 31.0 41.0 45 36.390269729490946 39.0 35.0 40.0 31.0 41.0 46 36.304803419691815 38.0 35.0 40.0 31.0 41.0 47 36.25750980952628 38.0 35.0 40.0 31.0 41.0 48 36.19420913130473 38.0 35.0 40.0 31.0 41.0 49 36.21219109736767 38.0 35.0 40.0 31.0 41.0 50 36.08493360704727 38.0 35.0 40.0 31.0 41.0 51 34.89196528337188 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 8.0 10 4.0 11 8.0 12 4.0 13 8.0 14 3.0 15 8.0 16 18.0 17 17.0 18 39.0 19 70.0 20 165.0 21 264.0 22 444.0 23 552.0 24 727.0 25 1022.0 26 1274.0 27 1476.0 28 1610.0 29 1918.0 30 2450.0 31 3221.0 32 4491.0 33 6771.0 34 12261.0 35 13191.0 36 12666.0 37 19609.0 38 33850.0 39 35773.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.26390873892368 20.1231712704311 23.894966608632384 12.717953382012837 2 32.64493412675727 25.762024790167086 24.82589714939064 16.767143933685002 3 31.534053997869187 25.33716186368007 27.249045032871656 15.879739105579088 4 28.736065275576227 24.502377673258323 27.345191383208167 19.41636566795728 5 25.485279214198474 28.430735649507575 25.14616843801159 20.937816698282358 6 23.418132681963463 35.401995686406984 25.945872203310554 15.233999428318997 7 76.26419457942468 6.18779720915729 12.280747342982616 5.267260868435413 8 76.17194605410181 6.812098848842346 10.450718499077514 6.565236597978329 9 70.7045968349661 6.773770236208196 12.8004573448016 9.721175584024115 10 42.585687186549904 23.83000285840501 19.454044643089155 14.130265311955927 11 31.21833017176416 23.338876906686068 24.633604448717616 20.80918847283216 12 27.675856871865502 20.197229945690303 31.21053452173687 20.916378660707323 13 24.687524361406336 24.202245147207858 33.082789803289764 18.027440688096043 14 19.945170594808097 30.11654496790791 28.645116025257906 21.29316841202609 15 16.246784294363746 25.772418990203466 37.676376581867316 20.304420133565472 16 18.96551724137931 24.17950783462828 33.403710729412985 23.451264194579423 17 19.441701530545956 24.02879193410077 29.691032403918616 26.83847413143466 18 20.849465997973134 24.07036873424629 33.10617675337162 21.97398851440896 19 21.835615726424656 26.30447210456565 28.169581373593534 23.69033079541616 20 24.26396070992386 25.663929527323752 29.53901722838656 20.533092534365824 21 23.191409193669934 26.76051763116181 30.01974898006912 20.028324195099135 22 20.080295195281035 24.18015747213055 29.25512563989294 26.484421692695477 23 20.890393160616377 26.51625393030689 28.283267936491434 24.310084972585297 24 22.33778551568225 25.061715562716003 28.948496738819742 23.65200218278201 25 20.21606943325624 27.566068133981236 27.379622170828675 24.83824026193384 26 20.759166385157084 26.595509705584284 28.46256788711899 24.182756022139646 27 22.401449990905075 27.13081100745784 28.62367798768287 21.844061013954214 28 17.728607437050126 25.614557077150952 32.63648883922771 24.020346646571213 29 22.49759634124159 23.60003118260011 30.56284593196996 23.339526544188345 30 23.71501702050256 24.434815373021852 30.28415144349453 21.566016162981054 31 23.704622820466177 25.23062131330717 26.129069978951748 24.9356858872749 32 25.12408076293428 28.282618298989163 25.31247563859366 21.28082529948289 33 25.10459163786607 24.212639347244238 27.54527973390848 23.137489280981214 34 22.101967102356884 23.760491645661723 28.94589818881064 25.191643063170748 35 23.087467193306136 23.59483408258192 28.97318296390614 24.344515760205805 36 27.928565860249982 23.016007068056023 28.330041836655145 20.72538523503885 37 23.87742639607099 24.282800197489802 30.483590156692564 21.356183249746643 38 20.434347634020217 27.856456097497595 28.427487461996204 23.28170880648598 39 21.67970272587896 24.618013148663046 29.914507704700778 23.78777642075722 40 22.786685029753396 22.359223553257284 31.649689473273913 23.204401943715407 41 21.2113140867396 22.944546942805914 29.22914013980199 26.614998830652496 42 24.46859652314009 22.23709170282982 30.05223085518281 23.242080918847282 43 26.3181144921134 22.150689915027414 28.133201673466207 23.397993919392977 44 21.252241249382845 23.527921419847726 30.243873918353557 24.975963412415872 45 22.57815139152353 22.77694046721929 27.42574643349011 27.219161707767064 46 24.844086999454305 23.826105033391368 29.17716913962009 22.152638827534236 47 20.808538835329887 23.02055453057194 32.64558376425954 23.52532286983863 48 21.640724475742534 22.773692279707923 30.121092430423822 25.464490814125718 49 22.34688044071408 19.83083439440792 34.28916664501208 23.533118519865916 50 21.646571213262998 20.803341735311694 31.801055011303692 25.749032040121612 51 20.396668658888338 20.66496894732739 29.19470935218148 29.743653041602787 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 73.0 1 125.0 2 177.0 3 531.0 4 885.0 5 616.5 6 348.0 7 347.0 8 346.0 9 324.0 10 302.0 11 304.5 12 307.0 13 313.5 14 320.0 15 336.0 16 352.0 17 311.5 18 271.0 19 326.5 20 382.0 21 380.0 22 378.0 23 443.5 24 509.0 25 647.0 26 797.0 27 809.0 28 871.5 29 934.0 30 1131.5 31 1329.0 32 1728.0 33 2127.0 34 2696.5 35 3266.0 36 3651.0 37 4036.0 38 4351.5 39 4667.0 40 5492.5 41 6318.0 42 7342.0 43 8366.0 44 9656.0 45 10946.0 46 14252.0 47 17558.0 48 18014.0 49 18470.0 50 18478.0 51 18486.0 52 15616.0 53 12746.0 54 10846.5 55 8947.0 56 8118.0 57 7289.0 58 6553.0 59 5817.0 60 5498.5 61 5180.0 62 4675.5 63 4171.0 64 3527.0 65 2883.0 66 2230.0 67 1577.0 68 1366.0 69 1155.0 70 852.5 71 550.0 72 461.5 73 373.0 74 307.5 75 187.0 76 132.0 77 93.5 78 55.0 79 48.0 80 41.0 81 28.0 82 15.0 83 8.5 84 2.0 85 4.0 86 6.0 87 4.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 153932.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.17337525660682 #Duplication Level Percentage of deduplicated Percentage of total 1 74.261190615188 30.575838682015434 2 10.287319143564904 8.471273029649455 3 3.703119329746446 4.574097653509342 4 1.8886381924612252 3.1104643608866254 5 1.334826993168084 2.747966634617883 6 1.011376007825936 2.4985058337447703 7 0.8488616103125641 2.4465348335628723 8 0.7920604616671137 2.608944209131305 9 0.637435112576721 2.3620819582672867 >10 5.148393000836239 33.55702517994959 >50 0.05206771959166285 1.549385442922849 >100 0.025244954953533506 1.970350544396227 >500 0.0047334290537875325 1.4350492425226724 >1k 0.0047334290537875325 2.0924823948236884 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTTCTGC 1097 0.7126523399942831 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGC 1068 0.693812852428345 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTTC 1056 0.6860172024010602 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCG 923 0.599615414598654 No Hit CCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTTCTGC 747 0.4852792141984773 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 539 0.35015461372554113 No Hit CTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTTCTGCT 408 0.26505210092768233 TruSeq Adapter, Index 16 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTTCTGC 330 0.2143803757503313 TruSeq Adapter, Index 13 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCT 249 0.1617597380661591 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 238 0.15461372554114802 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTATCTGT 208 0.1351246004729361 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCC 196 0.12732895044565132 No Hit GAACTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTTCT 192 0.1247304004365564 No Hit CGCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTTCTG 156 0.10134345035470209 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.27739521347088325 0.0 2 0.0 0.0 0.0 1.8573136190005977 0.0 3 0.0 0.0 0.0 2.4283449834992075 0.0 4 0.0 0.0 0.0 3.2813190239846164 0.0 5 0.0 0.0 0.0 5.840890782943117 0.0 6 0.0 0.0 0.0 6.798456461294598 0.0 7 0.0 0.0 0.0 7.998986565496453 0.0 8 0.0 0.0 0.0 9.613335758646675 0.0 9 0.0 0.0 0.0 10.15058597302705 0.0 10 0.0 0.0 0.0 11.985162279448067 0.0 11 0.0 0.0 0.0 14.163396824571889 0.0 12 0.0 0.0 0.0 16.4234856949822 0.0 13 0.0 0.0 0.0 17.121196372424187 0.0 14 0.0 0.0 0.0 17.399241223397343 0.0 15 0.0 0.0 0.0 17.99755736299145 0.0 16 0.0 0.0 0.0 18.97591144141569 0.0 17 0.0 0.0 0.0 20.180339370631188 0.0 18 0.0 0.0 0.0 21.520541537821895 0.0 19 0.0 0.0 0.0 22.423537665982384 0.0 20 0.0 0.0 0.0 23.13683964347894 0.0 21 0.0 0.0 0.0 24.030740846607593 0.0 22 0.0 0.0 0.0 24.96167138736585 0.0 23 0.0 0.0 0.0 25.926383078242342 0.0 24 0.0 0.0 0.0 26.600706805602474 0.0 25 0.0 0.0 0.0 27.202920770210223 0.0 26 0.0 0.0 0.0 27.736273159576957 0.0 27 0.0 0.0 0.0 28.330041836655145 0.0 28 0.0 0.0 0.0 28.899124288646934 0.0 29 0.0 0.0 0.0 29.456513265597795 0.0 30 0.0 0.0 0.0 30.140581555492034 0.0 31 0.0 0.0 0.0 30.73370059506795 0.0 32 0.0 0.0 0.0 31.31967362211886 0.0 33 6.496375022737313E-4 0.0 0.0 31.876412961567446 0.0 34 6.496375022737313E-4 0.0 0.0 32.3967726008887 0.0 35 6.496375022737313E-4 0.0 0.0 33.05420575318972 0.0 36 6.496375022737313E-4 0.0 0.0 33.61159473014058 0.0 37 6.496375022737313E-4 0.0 0.0 34.17288153210509 0.0 38 6.496375022737313E-4 0.0 0.0 34.72052594652184 0.0 39 6.496375022737313E-4 0.0 0.0 35.33443338617052 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGGGA 35 1.2027704E-7 45.000004 4 GCGAAGG 35 1.2027704E-7 45.000004 2 GCGCGAC 30 2.1532232E-6 45.000004 9 CGACCTC 30 2.1532232E-6 45.000004 12 AGGGTAC 35 1.2027704E-7 45.000004 6 CGCGACC 30 2.1532232E-6 45.000004 10 ACGGGAT 30 2.1532232E-6 45.000004 5 GGGCGCG 30 2.1532232E-6 45.000004 7 ACGTGGC 30 2.1532232E-6 45.000004 26 TCAGACG 30 2.1532232E-6 45.000004 22 TCGTCCC 30 2.1532232E-6 45.000004 38 CGGGACA 35 1.2027704E-7 45.000004 6 GACGGGA 45 3.8016879E-10 45.000004 4 CCCCATT 30 2.1532232E-6 45.000004 42 GGCGCGA 30 2.1532232E-6 45.000004 8 CTAATCC 35 1.2027704E-7 45.000004 11 TTGATAG 20 7.0142373E-4 45.0 31 AAACTCA 20 7.0142373E-4 45.0 20 CTATGCT 20 7.0142373E-4 45.0 36 CGGCGGG 20 7.0142373E-4 45.0 3 >>END_MODULE