##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935549.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 158516 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.194863609982587 31.0 31.0 33.0 28.0 34.0 2 31.187034747281032 31.0 31.0 34.0 28.0 34.0 3 31.01807388528603 31.0 31.0 34.0 27.0 34.0 4 34.830654318806936 35.0 35.0 37.0 32.0 37.0 5 34.86150924827778 35.0 35.0 37.0 33.0 37.0 6 35.052234474753334 36.0 35.0 37.0 32.0 37.0 7 35.52665976936082 37.0 35.0 37.0 33.0 37.0 8 35.31605642332635 37.0 35.0 37.0 33.0 37.0 9 37.18360922556713 39.0 37.0 39.0 34.0 39.0 10 36.42027303237528 38.0 35.0 39.0 32.0 39.0 11 36.68251785308738 39.0 35.0 39.0 32.0 39.0 12 36.673622851951855 39.0 35.0 39.0 33.0 39.0 13 36.59429962905953 39.0 35.0 39.0 33.0 39.0 14 37.568895253475986 39.0 36.0 41.0 33.0 41.0 15 37.822137828358024 40.0 36.0 41.0 33.0 41.0 16 37.81232178455172 39.0 36.0 41.0 33.0 41.0 17 37.75301546847006 39.0 36.0 41.0 33.0 41.0 18 37.74295339271745 39.0 36.0 41.0 33.0 41.0 19 37.62989225062454 39.0 36.0 41.0 33.0 41.0 20 37.73397007242171 39.0 36.0 41.0 33.0 41.0 21 37.685104342779276 39.0 35.0 41.0 33.0 41.0 22 37.8006825809382 39.0 36.0 41.0 33.0 41.0 23 37.8382245325393 40.0 36.0 41.0 34.0 41.0 24 37.79327638850337 40.0 35.0 41.0 33.0 41.0 25 37.38384137878826 39.0 35.0 41.0 33.0 41.0 26 37.49035428600268 39.0 35.0 41.0 33.0 41.0 27 37.532122940271016 39.0 35.0 41.0 33.0 41.0 28 37.482519114789675 39.0 35.0 41.0 33.0 41.0 29 37.463700825153296 39.0 35.0 41.0 33.0 41.0 30 37.189356279492294 39.0 35.0 41.0 32.0 41.0 31 37.18928688586641 39.0 35.0 41.0 33.0 41.0 32 37.17255040500643 39.0 35.0 41.0 33.0 41.0 33 37.138566453859546 39.0 35.0 41.0 33.0 41.0 34 37.08274874460622 39.0 35.0 41.0 32.0 41.0 35 37.13541219813773 39.0 35.0 41.0 33.0 41.0 36 37.02031340684852 39.0 35.0 41.0 32.0 41.0 37 37.03123344015746 39.0 35.0 41.0 32.0 41.0 38 36.831903404072776 39.0 35.0 41.0 32.0 41.0 39 36.75770900098413 39.0 35.0 41.0 31.0 41.0 40 36.70448408993414 39.0 35.0 41.0 31.0 41.0 41 36.58054076560095 39.0 35.0 41.0 31.0 41.0 42 36.67431678821065 39.0 35.0 41.0 31.0 41.0 43 36.606979737061245 39.0 35.0 41.0 31.0 41.0 44 36.55201367685281 39.0 35.0 41.0 31.0 41.0 45 36.51182215044538 39.0 35.0 40.0 31.0 41.0 46 36.39383406091498 39.0 35.0 40.0 31.0 41.0 47 36.364379620984636 39.0 35.0 40.0 31.0 41.0 48 36.33688712811325 38.0 35.0 40.0 31.0 41.0 49 36.36934441949078 38.0 35.0 40.0 31.0 41.0 50 36.24855535087941 38.0 35.0 40.0 31.0 41.0 51 35.10706174771001 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 7.0 10 8.0 11 9.0 12 5.0 13 2.0 14 9.0 15 7.0 16 10.0 17 22.0 18 50.0 19 80.0 20 139.0 21 262.0 22 410.0 23 523.0 24 725.0 25 937.0 26 1133.0 27 1437.0 28 1690.0 29 1905.0 30 2496.0 31 3270.0 32 4505.0 33 6562.0 34 12600.0 35 14133.0 36 12563.0 37 19608.0 38 34604.0 39 38799.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.273966034974386 20.742385626687526 24.680158469807463 12.303489868530622 2 32.883746751116604 24.653662721744176 25.53496177042065 16.927628756718565 3 32.01443387418305 23.369249791819122 27.218703474728102 17.397612859269724 4 28.412273839864742 24.415200989174593 27.639481188018877 19.533043982941788 5 24.857427641373743 28.489868530621514 25.902747987584853 20.749955840419894 6 24.448005248681522 34.57253526457897 25.372833026319107 15.6066264604204 7 78.16308763784097 5.76913371520856 10.991319488253552 5.076459158696914 8 78.92641752252139 5.695324131317974 9.624265058416816 5.753993287743824 9 73.72757324181785 6.22460824143935 12.000050468091548 8.047768048651239 10 41.228014837618915 24.55588079436776 19.761412097201543 14.454692270811778 11 30.926215650155193 24.70917762244821 24.899694668046127 19.464912059350475 12 29.067728178858914 20.458502611723738 30.192535769259887 20.28123344015746 13 23.92439879885942 25.65166923212799 31.122410356052388 19.301521612960208 14 18.809457720356303 29.796361250599308 29.020414343031618 22.373766686012768 15 17.97862676322895 25.095889373943326 36.330086552777004 20.59539731005072 16 20.651543061899112 23.79570516540917 32.705846728405966 22.84690504428575 17 20.881803729591965 23.772363673067705 28.921370713366475 26.42446188397386 18 21.440106992354085 24.762799969719147 31.562113603674074 22.234979434252693 19 23.49100406268137 25.891392666986295 27.08811728784476 23.52948598248757 20 24.499104191375004 25.82326074339499 29.14784627419314 20.529788791036868 21 23.145928486714276 27.755557798581847 29.332685659491787 19.765828055212094 22 20.738600519821343 24.655555275177267 29.124504781851673 25.481339423149713 23 21.107017588129906 25.548840495596657 29.27780160993212 24.066340306341317 24 23.208382750006308 23.49605087183628 30.121249589946757 23.174316788210653 25 20.05917383734134 26.732317242423477 28.078553584496202 25.12995533573898 26 18.672563022029323 28.775013247874032 29.04312498422872 23.509298745867923 27 20.226980241742158 27.926518458704486 29.994448509929594 21.85205278962376 28 17.43798733250902 28.407227030709837 31.360241237477602 22.79454439930354 29 19.01826944914078 25.841555426581543 30.97352948598249 24.166645638295186 30 21.573216583814883 26.22952888036539 30.024098513714705 22.173156022105022 31 22.745968861187514 28.348557874283987 25.1015670342426 23.8039062302859 32 23.043099750182947 28.261500416361756 25.16149789295718 23.53390194049812 33 22.39016881576623 26.48313104039971 26.14751823159807 24.97918191223599 34 21.542304877741046 26.03270332332383 27.388402432562014 25.036589366373114 35 18.892099220267987 25.4220394155795 28.099371672260215 27.586489691892304 36 21.60917509904363 29.311867571727774 26.85533321557445 22.223624113654143 37 20.830073935754122 27.122183249640415 29.317545232027054 22.730197582578416 38 19.414443967801358 28.22428019884428 25.326150041636176 27.035125791718183 39 21.42685911832244 26.114713972091145 26.66797042569835 25.790456483888065 40 22.898634838123595 24.458729718135707 27.825582275606248 24.817053168134446 41 19.252315223699814 26.3203714451538 27.195361982386636 27.231951348759747 42 20.980216508112743 25.830200105982993 27.60036841706831 25.589214968835954 43 21.918292159781977 25.80181180448661 27.033233238285092 25.246662797446312 44 20.26356960811527 26.20114057886901 27.230689646471017 26.304600166544702 45 21.122788866739004 24.27073607711524 26.21501930404502 28.391455752100736 46 23.080319967700422 25.601201140578866 26.471144868656793 24.84733402306392 47 19.207524792449973 25.340659617956547 30.26445279971738 25.1873627898761 48 19.33684927704459 24.162860531429004 29.13207499558404 27.368215195942362 49 19.869287642887784 23.282192333896894 31.275076332988466 25.573443690226856 50 19.770874864367006 23.22793913548159 30.21966236846754 26.781523631683868 51 19.028363067450606 23.73892856241641 27.698150344444727 29.534558025688256 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 119.0 1 186.0 2 253.0 3 545.0 4 837.0 5 593.5 6 350.0 7 345.5 8 341.0 9 350.5 10 360.0 11 380.0 12 400.0 13 376.0 14 352.0 15 376.0 16 400.0 17 383.0 18 366.0 19 351.5 20 337.0 21 366.5 22 396.0 23 506.5 24 617.0 25 614.5 26 886.5 27 1161.0 28 1346.0 29 1531.0 30 1964.0 31 2397.0 32 2440.5 33 2484.0 34 3167.0 35 3850.0 36 4039.5 37 4229.0 38 4556.0 39 4883.0 40 5777.5 41 6672.0 42 8006.5 43 9341.0 44 10681.5 45 12022.0 46 14130.5 47 16239.0 48 16824.0 49 17409.0 50 17033.0 51 16657.0 52 14525.5 53 12394.0 54 10773.0 55 9152.0 56 8265.5 57 7379.0 58 6844.5 59 6310.0 60 5813.0 61 5316.0 62 5058.0 63 4800.0 64 3933.5 65 3067.0 66 2645.5 67 2224.0 68 1792.5 69 1361.0 70 1053.0 71 745.0 72 579.0 73 413.0 74 434.5 75 300.0 76 144.0 77 119.0 78 94.0 79 64.5 80 35.0 81 20.5 82 6.0 83 3.0 84 0.0 85 1.0 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 158516.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.60115067248732 #Duplication Level Percentage of deduplicated Percentage of total 1 74.33689061759466 28.694895152539807 2 9.759924169376848 7.534886068283328 3 3.371521025020837 3.904337732468647 4 1.7323375116442497 2.674808852103258 5 1.2208076615077874 2.35622902419945 6 0.8661687558221248 2.0061066390774434 7 0.79099184493945 2.1373236771051505 8 0.709277811371325 2.190315173231724 9 0.6471751458595498 2.24835347851321 >10 6.488094265309124 41.492341467107416 >50 0.049028420140874995 1.2781044184814152 >100 0.019611368056349998 1.4528501854702363 >500 0.008171403356812499 2.0294481314189103 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC 898 0.5665043276388503 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGC 636 0.4012213278154887 No Hit GAATCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTC 574 0.36210855686492216 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCG 568 0.3583234499987383 No Hit CCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC 541 0.34129046910091093 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 467 0.29460748441797674 No Hit CTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGCT 382 0.2409851371470388 No Hit TCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC 254 0.16023619066844988 No Hit ACTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC 177 0.11166065255242372 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCC 159 0.10030533195387217 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.308511443639758E-4 0.0 0.0 0.2750510989426935 0.0 2 6.308511443639758E-4 0.0 0.0 1.6162406318605063 0.0 3 6.308511443639758E-4 0.0 0.0 2.112720482474955 0.0 4 6.308511443639758E-4 0.0 0.0 2.852708874813899 0.0 5 6.308511443639758E-4 0.0 0.0 4.848721895581519 0.0 6 6.308511443639758E-4 0.0 0.0 5.7388528602790885 0.0 7 6.308511443639758E-4 0.0 0.0 6.669989149360317 0.0 8 6.308511443639758E-4 0.0 0.0 8.080572308158168 0.0 9 6.308511443639758E-4 0.0 0.0 8.554341517575512 0.0 10 6.308511443639758E-4 0.0 0.0 10.007822554190113 0.0 11 6.308511443639758E-4 0.0 0.0 11.718690857705216 0.0 12 6.308511443639758E-4 0.0 0.0 13.413787882611219 0.0 13 6.308511443639758E-4 0.0 0.0 13.985969870549345 0.0 14 6.308511443639758E-4 0.0 0.0 14.220015645108381 0.0 15 6.308511443639758E-4 0.0 0.0 14.67549017133917 0.0 16 6.308511443639758E-4 0.0 0.0 15.592747735244393 0.0 17 6.308511443639758E-4 0.0 0.0 16.67339574553988 0.0 18 6.308511443639758E-4 0.0 0.0 17.902293774760906 0.0 19 6.308511443639758E-4 0.0 0.0 18.62777259077948 0.0 20 6.308511443639758E-4 0.0 0.0 19.275656716041283 0.0 21 6.308511443639758E-4 0.0 0.0 20.039617451866057 0.0 22 6.308511443639758E-4 0.0 0.0 20.787806909081734 0.0 23 6.308511443639758E-4 0.0 0.0 21.5921421181458 0.0 24 6.308511443639758E-4 0.0 0.0 22.208483686189407 0.0 25 6.308511443639758E-4 0.0 0.0 22.741552903176967 0.0 26 6.308511443639758E-4 0.0 0.0 23.24812637210124 0.0 27 6.308511443639758E-4 0.0 0.0 23.764162608190972 0.0 28 0.0012617022887279517 0.0 0.0 24.252441393928688 0.0 29 0.0012617022887279517 0.0 0.0 24.77983295061697 0.0 30 0.0012617022887279517 0.0 0.0 25.34570642711146 0.0 31 0.0012617022887279517 0.0 0.0 25.9456458654016 0.0 32 0.0012617022887279517 0.0 0.0 26.482500189255344 0.0 33 0.0012617022887279517 0.0 0.0 26.992227913901434 0.0 34 0.0018925534330919277 0.0 0.0 27.486815211082792 0.0 35 0.0018925534330919277 0.0 0.0 28.034394004390723 0.0 36 0.0018925534330919277 0.0 0.0 28.52582704585026 0.0 37 0.0018925534330919277 0.0 0.0 29.08413030861238 0.0 38 0.0018925534330919277 0.0 0.0 29.5478058997199 0.0 39 0.0018925534330919277 0.0 0.0 30.07267405183073 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCATAC 30 2.1536325E-6 45.000004 39 CGGAACG 20 7.014874E-4 45.000004 27 AGCCGGC 20 7.014874E-4 45.000004 20 GTACCGG 20 7.014874E-4 45.000004 2 GGCACTA 20 7.014874E-4 45.000004 8 CGGCCAA 20 7.014874E-4 45.000004 15 TTGTACG 20 7.014874E-4 45.000004 24 TACGGAC 20 7.014874E-4 45.000004 27 CGACACA 20 7.014874E-4 45.000004 38 AGGCGAC 20 7.014874E-4 45.000004 35 TATGCAG 40 6.7520887E-9 45.000004 1 GCCGATG 20 7.014874E-4 45.000004 9 CCTCCGC 30 2.1536325E-6 45.000004 45 GTGCTAG 30 2.1536325E-6 45.000004 1 GGAACGC 20 7.014874E-4 45.000004 28 TGTTACG 20 7.014874E-4 45.000004 1 TAGGGCG 20 7.014874E-4 45.000004 5 CCGACGG 20 7.014874E-4 45.000004 2 CGTAAGG 30 2.1536325E-6 45.000004 2 CATCGAA 20 7.014874E-4 45.000004 42 >>END_MODULE