##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935548.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 429232 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.235331941700526 31.0 31.0 33.0 28.0 34.0 2 31.213672326387595 31.0 31.0 34.0 28.0 34.0 3 31.013680247511836 31.0 31.0 34.0 27.0 34.0 4 34.869224568531706 35.0 35.0 37.0 32.0 37.0 5 34.8745177433183 35.0 35.0 37.0 33.0 37.0 6 35.08206750661647 36.0 35.0 37.0 32.0 37.0 7 35.54392729339844 37.0 35.0 37.0 33.0 37.0 8 35.29170238938383 37.0 35.0 37.0 32.0 37.0 9 37.19054730309017 39.0 37.0 39.0 34.0 39.0 10 36.4941942818802 38.0 35.0 39.0 32.0 39.0 11 36.72052875834048 39.0 35.0 39.0 32.0 39.0 12 36.904655291310995 39.0 37.0 39.0 33.0 39.0 13 36.96729507585641 39.0 37.0 39.0 33.0 39.0 14 38.04434897677713 40.0 37.0 41.0 33.0 41.0 15 38.176580497260225 40.0 37.0 41.0 33.0 41.0 16 38.17920145748686 40.0 37.0 41.0 34.0 41.0 17 38.051617773139 40.0 37.0 41.0 33.0 41.0 18 38.059734595743095 39.0 37.0 41.0 34.0 41.0 19 37.92995396428971 39.0 37.0 41.0 34.0 41.0 20 37.94276987736236 40.0 37.0 41.0 33.0 41.0 21 37.95114530137548 40.0 37.0 41.0 34.0 41.0 22 38.08621444813061 40.0 37.0 41.0 34.0 41.0 23 38.114448596563165 40.0 37.0 41.0 34.0 41.0 24 38.11876094978939 40.0 37.0 41.0 34.0 41.0 25 37.74059250009319 40.0 36.0 41.0 33.0 41.0 26 37.82699099787528 40.0 36.0 41.0 33.0 41.0 27 37.86824840645618 40.0 37.0 41.0 33.0 41.0 28 37.76539260819324 40.0 36.0 41.0 33.0 41.0 29 37.75156558690871 40.0 36.0 41.0 33.0 41.0 30 37.519513922540725 40.0 36.0 41.0 33.0 41.0 31 37.49957598687889 40.0 36.0 41.0 33.0 41.0 32 37.44665821746748 40.0 36.0 41.0 33.0 41.0 33 37.41670238938383 40.0 36.0 41.0 33.0 41.0 34 37.30434823125955 40.0 36.0 41.0 32.0 41.0 35 37.33083274313192 40.0 36.0 41.0 33.0 41.0 36 37.17777798486599 40.0 36.0 41.0 32.0 41.0 37 37.186200003727585 40.0 36.0 41.0 32.0 41.0 38 37.05827617698587 40.0 36.0 41.0 32.0 41.0 39 36.97979880344429 40.0 36.0 41.0 31.0 41.0 40 36.90551496626533 39.0 35.0 41.0 31.0 41.0 41 36.76155785216387 39.0 35.0 41.0 31.0 41.0 42 36.81245573489395 39.0 35.0 41.0 31.0 41.0 43 36.759165206694746 39.0 35.0 41.0 31.0 41.0 44 36.811109143773066 39.0 35.0 41.0 31.0 41.0 45 36.80132888507847 39.0 35.0 41.0 31.0 41.0 46 36.70133634025422 39.0 35.0 41.0 31.0 41.0 47 36.62898152980207 39.0 35.0 41.0 31.0 41.0 48 36.595684851082865 39.0 35.0 41.0 31.0 41.0 49 36.6104274611399 39.0 35.0 41.0 31.0 41.0 50 36.49489087486487 39.0 35.0 41.0 31.0 41.0 51 35.41146978790025 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 18.0 9 20.0 10 20.0 11 18.0 12 11.0 13 12.0 14 17.0 15 26.0 16 32.0 17 52.0 18 97.0 19 229.0 20 430.0 21 863.0 22 1260.0 23 1638.0 24 2188.0 25 2925.0 26 3584.0 27 3947.0 28 4115.0 29 4915.0 30 6011.0 31 7965.0 32 10581.0 33 15286.0 34 25717.0 35 29733.0 36 34055.0 37 53441.0 38 98140.0 39 121864.0 40 20.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.60625489245909 20.823004808588365 24.39566481529802 11.175075483654528 2 32.200534908860476 27.330208372162375 23.485667424609534 16.983589294367615 3 30.617008983486787 26.446071122376708 26.84632087076453 16.090599023371976 4 27.000083870727252 24.59159615312931 29.50315913072651 18.90516084541693 5 26.631052670816715 29.459592947403735 24.736972080366794 19.172382301412753 6 23.826741715435944 35.66952137771648 25.519998508964846 14.983738397882728 7 77.89726767808551 5.1736590002609315 12.305466507622917 4.623606814030641 8 78.46572482946286 7.369907183061841 9.272607820479367 4.891760166995937 9 72.85314235658106 7.122488537667275 10.772495992843032 9.251873112908637 10 36.34491370634063 32.77458344205464 17.708372162373728 13.172130689230999 11 26.20680657546502 24.961093301524585 29.869627613971 18.9624725090394 12 22.963572147463378 22.86735378536549 33.02107019047974 21.148003876691394 13 22.873178141424685 24.78473180005219 34.44104819771126 17.90104186081187 14 19.143027546874418 29.916455436686917 30.36446490476013 20.576052111678532 15 17.318140306407724 27.181104857047007 35.522980579267156 19.977774257278117 16 20.08866999664517 28.287732508293885 29.7279792746114 21.89561822044955 17 20.41460096171767 27.634472732694675 29.589825548887315 22.36110075670034 18 21.771908897752265 25.944710552801283 31.168226040928914 21.115154508517538 19 20.66481529802065 27.877930815968988 29.190740671711335 22.266513214299028 20 22.950525589890784 27.38169567972565 31.143996719722665 18.523782010660902 21 21.242358444850336 29.753140492787118 30.726506877399633 18.27799418496291 22 20.841875722220152 24.416166548626382 31.463870354493608 23.278087374659858 23 19.479209378611102 27.866282103850597 30.716023036493084 21.938485481045216 24 19.834029149737205 26.128993178514182 31.20130838334514 22.835669288403473 25 18.49046669400231 31.044050769746896 28.319417005255897 22.146065530994893 26 18.87813583330227 28.166818876505012 29.706312670071195 23.24873262012152 27 20.973506169157936 28.603179632459835 28.962658888433296 21.46065530994893 28 17.429734968501883 28.805168300592687 31.171254706079697 22.593842024825737 29 19.01652253326872 28.3627502143363 29.910864054870096 22.709863197524882 30 20.300676557199836 30.260558392664105 29.45679725649532 19.981967793640734 31 23.267836507995675 28.272356208297612 25.85897603160994 22.600831252096768 32 22.1120512916092 30.95435568643531 26.71329257837253 20.220300443582957 33 22.608053453610168 27.55968800089462 26.897575204085438 22.934683341409773 34 20.69719871770977 27.39730495396429 28.03588735229433 23.869608976031607 35 20.745424385879897 29.016708912662615 27.33486785700973 22.902998844447758 36 22.105295038580536 30.133354456331308 27.718809408431806 20.042541096656354 37 19.990121892123607 30.387529354754538 28.70918291273717 20.913165840384686 38 23.302316695866104 28.24533119618295 26.441178663286983 22.01117344466396 39 22.078503000708242 27.004510381332242 28.2059585492228 22.71102806873672 40 24.10281619264174 25.056612740895368 28.84104633391732 21.99952473254557 41 20.165551496626534 26.809976888955156 28.027966228053824 24.996505386364483 42 22.03377194617363 26.01669959369292 29.96328325940284 21.986245200730608 43 22.137678458269654 26.648991687479036 29.070292988407203 22.143036865844113 44 21.26891750848026 26.759188504118985 28.041944682595894 23.92994930480486 45 21.935456815894437 25.507184925634625 26.92320237074589 25.63415588772505 46 23.937870429045365 26.91598016923249 26.84422410258322 22.30192529913893 47 19.75109031945428 26.13947701942073 31.767202818056433 22.34222984306855 48 20.833255675252545 26.066323107317256 29.284862265627915 23.815558951802288 49 21.601837700823797 23.995182092667836 32.221036642188835 22.18194356431953 50 20.841875722220152 24.30294106683565 30.903334327356767 23.95184888358743 51 20.696499794982667 23.55276400641145 27.73371975994334 28.01701643866254 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 133.0 1 302.0 2 471.0 3 1707.5 4 2944.0 5 2008.5 6 1073.0 7 1054.0 8 1035.0 9 1015.0 10 995.0 11 1022.0 12 1049.0 13 1038.5 14 1028.0 15 994.5 16 961.0 17 1024.0 18 1087.0 19 1062.0 20 1037.0 21 1318.5 22 1600.0 23 1718.5 24 1837.0 25 2547.0 26 3771.5 27 4286.0 28 5351.5 29 6417.0 30 7381.5 31 8346.0 32 9570.5 33 10795.0 34 12519.5 35 14244.0 36 15330.0 37 16416.0 38 17713.5 39 19011.0 40 21089.0 41 23167.0 42 24648.5 43 26130.0 44 28294.0 45 30458.0 46 41697.5 47 52937.0 48 49696.5 49 46456.0 50 44824.0 51 43192.0 52 36248.0 53 29304.0 54 24975.5 55 20647.0 56 18304.0 57 15961.0 58 13943.5 59 11926.0 60 10846.0 61 9766.0 62 8644.0 63 7522.0 64 6287.0 65 5052.0 66 4222.0 67 3392.0 68 2727.5 69 2063.0 70 1704.5 71 1346.0 72 1045.0 73 744.0 74 629.0 75 412.5 76 311.0 77 259.5 78 208.0 79 139.0 80 70.0 81 40.0 82 10.0 83 7.5 84 5.0 85 7.0 86 9.0 87 10.5 88 12.0 89 7.5 90 3.0 91 3.5 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 429232.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.89460320148183 #Duplication Level Percentage of deduplicated Percentage of total 1 73.74635164281244 28.68335084704137 2 9.718093330628461 7.559627679395218 3 3.534446613518539 4.124126957088743 4 1.9979316329574028 3.1083503235026724 5 1.4992122502077232 2.9155632793315043 6 1.1843552069985477 2.763901549549043 7 1.01720698915793 2.76947035519502 8 0.8600554979036575 2.6761213857772517 9 0.8082478349577615 2.829283094622501 >10 5.525401807923968 33.60928704233865 >50 0.07065317540687113 1.9654266493020136 >100 0.028985918115639442 1.8383597495323682 >500 0.006038732940758217 1.6746524867977242 >1k 0.0030193664703791084 3.4824786005259263 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTC 4061 0.9461083982554889 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGC 3679 0.8571122376710032 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCG 3308 0.7706787937525628 No Hit GCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTGC 2061 0.48015991351996123 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1718 0.40024974838781824 No Hit CCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTGC 992 0.23111044842882172 No Hit CTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTGCT 823 0.19173780146866962 Illumina Single End Adapter 2 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCT 784 0.18265180601632683 No Hit GAACTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCT 774 0.18032206359264918 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 737 0.17170201662504192 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGAGCGTT 693 0.16145114996086032 No Hit CGCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTG 636 0.1481716181458978 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTC 589 0.1372218287546129 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTA 580 0.135125060573303 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTT 522 0.12161255451597272 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCC 443 0.10320758936891937 No Hit TCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTGC 443 0.10320758936891937 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.6594848473552764E-4 0.0 0.0 0.198261080254967 0.0 2 4.6594848473552764E-4 0.0 0.0 1.129459126998919 0.0 3 4.6594848473552764E-4 0.0 0.0 1.5497446602303648 0.0 4 4.6594848473552764E-4 0.0 0.0 2.2242050918850413 0.0 5 4.6594848473552764E-4 0.0 0.0 4.472872479218697 0.0 6 4.6594848473552764E-4 0.0 0.0 5.435755022924665 0.0 7 4.6594848473552764E-4 0.0 0.0 6.383261266634361 0.0 8 4.6594848473552764E-4 0.0 0.0 7.725658851157416 0.0 9 4.6594848473552764E-4 0.0 0.0 8.146876281358333 0.0 10 4.6594848473552764E-4 0.0 0.0 9.91305401274835 0.0 11 4.6594848473552764E-4 0.0 0.0 11.518246542662244 0.0 12 4.6594848473552764E-4 0.0 0.0 13.630856972453126 0.0 13 4.6594848473552764E-4 0.0 0.0 14.219582882916464 0.0 14 4.6594848473552764E-4 0.0 0.0 14.462342043463675 0.0 15 4.6594848473552764E-4 0.0 0.0 14.947860364558094 0.0 16 4.6594848473552764E-4 0.0 0.0 15.760707496179222 0.0 17 4.6594848473552764E-4 0.0 0.0 16.85778320348902 0.0 18 4.6594848473552764E-4 0.0 0.0 17.907565139598166 0.0 19 4.6594848473552764E-4 0.0 0.0 18.723673910612444 0.0 20 4.6594848473552764E-4 0.0 0.0 19.386252655906365 0.0 21 4.6594848473552764E-4 0.0 0.0 20.16694934208074 0.0 22 4.6594848473552764E-4 0.0 0.0 21.00658851157416 0.0 23 4.6594848473552764E-4 0.0 0.0 21.821765385618967 0.0 24 4.6594848473552764E-4 0.0 0.0 22.440777947590114 0.0 25 4.6594848473552764E-4 0.0 0.0 23.00410966563537 0.0 26 4.6594848473552764E-4 0.0 0.0 23.54041637156596 0.0 27 4.6594848473552764E-4 0.0 0.0 24.079285794162598 0.0 28 4.6594848473552764E-4 0.0 0.0 24.618621165243972 0.0 29 4.6594848473552764E-4 0.0 0.0 25.202221642375218 0.0 30 4.6594848473552764E-4 0.0 0.0 25.884603198270398 0.0 31 4.6594848473552764E-4 0.0 0.0 26.45748686025273 0.0 32 4.6594848473552764E-4 0.0 0.0 27.007073097998287 0.0 33 4.6594848473552764E-4 0.0 0.0 27.569472919074066 0.0 34 4.6594848473552764E-4 0.0 0.0 28.13047489469564 0.0 35 4.6594848473552764E-4 0.0 0.0 28.72572408394528 0.0 36 4.6594848473552764E-4 0.0 0.0 29.27367950199426 0.0 37 4.6594848473552764E-4 0.0 0.0 29.83957393670556 0.0 38 4.6594848473552764E-4 0.0 0.0 30.401740783538973 0.0 39 4.6594848473552764E-4 0.0 0.0 30.962043836433445 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCGAC 45 3.8380676E-10 45.000004 9 CGAACCC 40 6.7975634E-9 45.0 34 CGCGGGT 20 7.028342E-4 45.0 2 CCGATCG 20 7.028342E-4 45.0 40 GCGAACC 40 6.7975634E-9 45.0 33 TACGGGT 20 7.028342E-4 45.0 4 GTGCTAG 25 3.8867074E-5 45.0 1 CTACGCG 20 7.028342E-4 45.0 1 CGTAAGC 20 7.028342E-4 45.0 43 AGTACGG 40 6.7975634E-9 45.0 2 GTACGAG 25 3.8867074E-5 45.0 1 TCGTTGA 30 2.162311E-6 44.999996 24 CGTTGAT 30 2.162311E-6 44.999996 25 GTTAGCG 30 2.162311E-6 44.999996 1 TCGTGTA 30 2.162311E-6 44.999996 17 CGTGTAC 30 2.162311E-6 44.999996 18 TAGTACG 30 2.162311E-6 44.999996 1 GGCGAAC 105 0.0 42.857143 32 CGTTTTT 975 0.0 42.69231 1 TGCGGGT 85 0.0 42.35294 4 >>END_MODULE