##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935543.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 327137 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.253609344097427 31.0 31.0 33.0 28.0 34.0 2 31.255694097579912 31.0 31.0 34.0 28.0 34.0 3 31.082185750923927 31.0 31.0 34.0 28.0 34.0 4 34.92840002812277 35.0 35.0 37.0 32.0 37.0 5 34.90563892191956 35.0 35.0 37.0 33.0 37.0 6 35.07947129184409 37.0 35.0 37.0 32.0 37.0 7 35.54635519675243 37.0 35.0 37.0 33.0 37.0 8 35.15449490580399 37.0 35.0 37.0 32.0 37.0 9 37.038399814145144 39.0 37.0 39.0 33.0 39.0 10 36.506588982597506 38.0 35.0 39.0 32.0 39.0 11 36.72517630228314 39.0 35.0 39.0 32.0 39.0 12 36.82726808645919 39.0 35.0 39.0 33.0 39.0 13 36.84484482036578 39.0 37.0 39.0 33.0 39.0 14 37.91646007635945 40.0 37.0 41.0 33.0 41.0 15 38.083524639524114 40.0 37.0 41.0 33.0 41.0 16 38.06575838257366 40.0 37.0 41.0 34.0 41.0 17 37.94782919694195 40.0 37.0 41.0 33.0 41.0 18 37.92722315115685 39.0 37.0 41.0 33.0 41.0 19 37.82302215891202 39.0 37.0 41.0 33.0 41.0 20 37.852581640107964 39.0 36.0 41.0 33.0 41.0 21 37.836310169745396 40.0 36.0 41.0 33.0 41.0 22 37.929060301953 40.0 36.0 41.0 33.0 41.0 23 37.978611407453144 40.0 36.0 41.0 34.0 41.0 24 37.96096742343422 40.0 36.0 41.0 33.0 41.0 25 37.59594909777861 39.0 36.0 41.0 33.0 41.0 26 37.639190920012105 40.0 36.0 41.0 33.0 41.0 27 37.67404481914305 40.0 36.0 41.0 33.0 41.0 28 37.57153425017653 40.0 36.0 41.0 33.0 41.0 29 37.585369432378485 40.0 36.0 41.0 33.0 41.0 30 37.328846935687494 39.0 36.0 41.0 32.0 41.0 31 37.32102146806995 39.0 35.0 41.0 33.0 41.0 32 37.27980631967647 39.0 35.0 41.0 33.0 41.0 33 37.27920106866542 40.0 35.0 41.0 33.0 41.0 34 37.196694351296244 40.0 35.0 41.0 32.0 41.0 35 37.214900790800186 40.0 35.0 41.0 32.0 41.0 36 37.07874376790152 40.0 35.0 41.0 32.0 41.0 37 37.07053619737297 40.0 35.0 41.0 32.0 41.0 38 36.91060014611615 39.0 35.0 41.0 31.0 41.0 39 36.840421597067895 39.0 35.0 41.0 31.0 41.0 40 36.71896483736172 39.0 35.0 41.0 31.0 41.0 41 36.58509737510584 39.0 35.0 41.0 31.0 41.0 42 36.6148861180484 39.0 35.0 41.0 31.0 41.0 43 36.60236536986034 39.0 35.0 41.0 31.0 41.0 44 36.60975676857097 39.0 35.0 41.0 31.0 41.0 45 36.61765254312414 39.0 35.0 41.0 31.0 41.0 46 36.488348918037396 39.0 35.0 41.0 31.0 41.0 47 36.43282172300901 39.0 35.0 41.0 31.0 41.0 48 36.36292440170326 39.0 35.0 41.0 31.0 41.0 49 36.318083860890084 39.0 35.0 40.0 31.0 41.0 50 36.21246144581628 38.0 35.0 40.0 31.0 41.0 51 35.06218189932658 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 10.0 9 27.0 10 25.0 11 22.0 12 12.0 13 12.0 14 17.0 15 18.0 16 43.0 17 61.0 18 125.0 19 202.0 20 430.0 21 716.0 22 1047.0 23 1259.0 24 1680.0 25 2185.0 26 2608.0 27 2879.0 28 3320.0 29 3747.0 30 4833.0 31 6289.0 32 8481.0 33 12479.0 34 22847.0 35 24990.0 36 26440.0 37 40645.0 38 71300.0 39 88375.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.526990221222306 20.44220005685691 21.89571953034967 11.135090191571114 2 32.38795978443282 26.531086364428358 23.661340661557695 17.419613189581124 3 32.805827527916435 25.81945790295809 24.980665592702753 16.394048976422724 4 30.193466345904007 24.382445275221084 26.597725112108993 18.82636326676591 5 27.214897733976894 29.598914216368065 22.56883201838985 20.61735603126519 6 25.03354863558693 37.26787248155971 23.017573677083302 14.68100520577006 7 77.42138614708823 6.535793872292037 11.318193906528458 4.724626074091283 8 76.8424238163216 8.811598810284377 9.120949327040353 5.2250280463536685 9 70.61628614311435 8.9225614956425 10.85263971975044 9.608512641492709 10 41.42759761200965 26.094571998887318 17.732326211954014 14.745504177149025 11 31.28689203605829 26.101908374778766 23.30399801917851 19.307201569984443 12 28.97807340655444 21.852924004316236 27.970544450795842 21.198458138333482 13 25.62076438923142 24.02693672681476 29.51760271690454 20.83469616704928 14 20.12918135215521 29.83031573927743 27.29590355111161 22.744599357455744 15 19.110647832559447 26.877424442970376 32.917095895603374 21.094831828866806 16 21.93209572747809 25.114248770392834 30.37657006086135 22.577085441267723 17 21.780171610059394 25.79500331665327 28.54706132293198 23.877763750355356 18 22.043669777493832 26.454971464554607 28.308017741802367 23.193341016149198 19 24.440524917695033 27.020178090524766 25.67823266704775 22.861064324732453 20 27.482981136343486 25.24599785411005 28.095568523279233 19.175452486267222 21 25.44866523811125 27.39769576660543 26.52008180059119 20.63355719469213 22 22.35424302356505 25.129227204504534 27.23171026206146 25.284819509868957 23 23.544570011952178 26.760959475693667 27.75259295035413 21.941877562000016 24 23.81112500267472 24.958962147357223 27.514466416210947 23.715446433757112 25 22.47131935549938 28.077227583550624 25.942647881468623 23.508805179481378 26 21.928427539532365 26.894848335712563 27.909713667362603 23.267010457392466 27 24.768216374179623 26.82301298844215 27.04004744189743 21.368723195480793 28 20.54582636632359 27.90543411475926 29.232706786453384 22.31603273246377 29 23.200371709711835 26.08448448203658 28.910517611887375 21.804626196364215 30 23.74846012526862 26.889957418451598 27.44354811592697 21.91803434035282 31 24.692101474305872 26.109244750670207 25.603951861146857 23.59470191387706 32 26.211648330821642 28.212033490555942 25.35390371618007 20.22241446244234 33 24.971189440509633 27.476561807438475 24.603453598950896 22.948795153100995 34 23.793701109932535 26.502657907849002 26.989304175314928 22.71433680690353 35 24.561880802232704 26.315274640288322 25.566047252374386 23.556797305104592 36 23.391423165218242 28.389023558937083 26.130031149029303 22.08952212681537 37 25.0149020135295 27.767571384465832 26.473006721954413 20.744519880050255 38 22.61865823798592 27.958011475314628 25.921250118451905 23.502080168247556 39 24.866646084056526 25.633297364712643 26.169158487117016 23.33089806411381 40 23.724616903621417 26.217761977397846 29.082005398349924 20.975615720630806 41 22.013101544612805 26.671700235681072 26.928779074210503 24.38641914549562 42 21.966332148304836 27.201447711509246 27.723553129117157 23.108667011068757 43 23.970691178313672 25.141148815328133 26.81139705994736 24.07676294641083 44 23.313779853700435 26.15173459437483 27.347258182351737 23.187227369572994 45 23.296661643287063 24.682319639783945 26.468115804693447 25.55290291223555 46 23.621907641141174 27.4236787645543 25.980858172569903 22.973555421734627 47 22.76324597951317 25.778190788568704 29.52983001005695 21.928733221861176 48 23.010848665849476 24.950403042150537 27.91429890229476 24.12444938970523 49 21.845587628424788 24.879790424195367 29.827258915989326 23.44736303139052 50 21.128762567364742 25.140537450670514 29.39594115003806 24.334758831926685 51 21.335098139311665 24.69821512088208 27.365599122080354 26.601087617725906 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 158.0 1 422.0 2 686.0 3 1122.5 4 1559.0 5 1155.5 6 752.0 7 712.0 8 672.0 9 679.0 10 686.0 11 673.0 12 660.0 13 704.5 14 749.0 15 733.5 16 718.0 17 708.5 18 699.0 19 732.0 20 765.0 21 793.0 22 821.0 23 1035.0 24 1249.0 25 1483.5 26 2336.5 27 2955.0 28 3463.5 29 3972.0 30 4666.0 31 5360.0 32 5920.5 33 6481.0 34 7546.0 35 8611.0 36 8860.0 37 9109.0 38 9812.0 39 10515.0 40 12715.0 41 14915.0 42 16057.5 43 17200.0 44 18307.5 45 19415.0 46 25503.0 47 31591.0 48 30702.0 49 29813.0 50 29322.0 51 28831.0 52 25409.0 53 21987.0 54 20050.5 55 18114.0 56 17476.5 57 16839.0 58 16505.0 59 16171.0 60 15807.5 61 15444.0 62 13972.5 63 12501.0 64 10778.0 65 9055.0 66 7470.0 67 5885.0 68 4905.5 69 3926.0 70 3189.5 71 2453.0 72 2168.0 73 1883.0 74 1463.0 75 878.0 76 713.0 77 484.5 78 256.0 79 172.0 80 88.0 81 84.0 82 80.0 83 47.5 84 15.0 85 15.5 86 16.0 87 9.0 88 2.0 89 3.0 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 327137.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.481376657752392 #Duplication Level Percentage of deduplicated Percentage of total 1 69.60246405672248 21.91181387277353 2 9.016549753316596 5.6770679787504825 3 3.476593298030173 3.2834382930331643 4 2.212843823641877 2.786534795874037 5 1.7470802821988252 2.750024620761678 6 1.4733611293649065 2.7830061999856843 7 1.287565904377524 2.837404304517191 8 1.1447248185876875 2.883001054674901 9 1.0658127053004802 3.019792609996422 >10 8.83515778701531 44.85223772306774 >50 0.09289651488626852 2.0311194862836426 >100 0.038956603016822286 2.5770280523447053 >500 0.001997774513683194 0.46509145691492604 >1k 0.003995549027366388 2.142439551021901 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTC 2004 0.6125873869357487 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGC 1864 0.5697918609023132 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCG 1805 0.5517566035025081 No Hit GCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGC 1140 0.34847785484368937 TruSeq Adapter, Index 15 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGC 756 0.23109584058055185 TruSeq Adapter, Index 15 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 723 0.2210083237298135 No Hit CTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGCT 423 0.12930362508673734 TruSeq Adapter, Index 14 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGTGAGACT 421 0.12869226042911686 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCT 398 0.12166156686648102 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 364 0.11126836768693238 No Hit GCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCAAGATACTTAACT 349 0.10668313275477859 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.056823288102538E-4 0.0 0.0 0.13327749536127065 0.0 2 3.056823288102538E-4 0.0 0.0 0.8528536973806081 0.0 3 3.056823288102538E-4 0.0 0.0 1.0970938781000008 0.0 4 3.056823288102538E-4 0.0 0.0 1.5161843508988588 0.0 5 3.056823288102538E-4 0.0 0.0 3.026560737550323 0.0 6 3.056823288102538E-4 0.0 0.0 3.619584455442215 0.0 7 3.056823288102538E-4 0.0 0.0 4.227280925117 0.0 8 3.056823288102538E-4 0.0 0.0 5.057514130165649 0.0 9 3.056823288102538E-4 0.0 0.0 5.313981604037452 0.0 10 3.056823288102538E-4 0.0 0.0 6.485661970367155 0.0 11 3.056823288102538E-4 0.0 0.0 7.4152419322791365 0.0 12 3.056823288102538E-4 0.0 0.0 8.726007758217506 0.0 13 3.056823288102538E-4 0.0 0.0 9.053393532373287 0.0 14 3.056823288102538E-4 0.0 0.0 9.20012105020221 0.0 15 3.056823288102538E-4 0.0 0.0 9.547987540388277 0.0 16 3.056823288102538E-4 0.0 0.0 10.101883920192458 0.0 17 3.056823288102538E-4 0.0 0.0 10.668007593149047 0.0 18 3.056823288102538E-4 0.0 0.0 11.290682496935535 0.0 19 3.056823288102538E-4 0.0 0.0 11.796892433445315 0.0 20 3.056823288102538E-4 0.0 0.0 12.195196507885075 0.0 21 3.056823288102538E-4 0.0 0.0 12.650663177812353 0.0 22 3.056823288102538E-4 0.0 0.0 13.176742465694801 0.0 23 3.056823288102538E-4 0.0 0.0 13.67011374439455 0.0 24 3.056823288102538E-4 0.0 0.0 14.070557595135982 0.0 25 3.056823288102538E-4 0.0 0.0 14.433096837104944 0.0 26 3.056823288102538E-4 0.0 0.0 14.779434915646961 0.0 27 3.056823288102538E-4 0.0 0.0 15.137083240354958 0.0 28 3.056823288102538E-4 0.0 0.0 15.51337818712038 0.0 29 3.056823288102538E-4 0.0 0.0 15.867969688540276 0.0 30 3.056823288102538E-4 0.0 0.0 16.287060161339134 0.0 31 3.056823288102538E-4 0.0 0.0 16.660298284816452 0.0 32 3.056823288102538E-4 0.0 0.0 17.02925685569043 0.0 33 3.056823288102538E-4 0.0 0.0 17.40463475546942 0.0 34 3.056823288102538E-4 0.0 0.0 17.77756719661793 0.0 35 3.056823288102538E-4 0.0 0.0 18.189626975854154 0.0 36 3.056823288102538E-4 0.0 0.0 18.58426286234819 0.0 37 3.056823288102538E-4 0.0 0.0 18.975841925554125 0.0 38 3.056823288102538E-4 0.0 0.0 19.34327208478405 0.0 39 3.056823288102538E-4 0.0 0.0 19.708256785383494 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 45 3.8380676E-10 45.000004 25 CTCACGA 45 3.8380676E-10 45.000004 24 CCTTCGT 20 7.025879E-4 45.0 33 TTGTGCG 35 1.2083729E-7 45.0 1 GACGTAG 20 7.025879E-4 45.0 1 TGCGGTC 20 7.025879E-4 45.0 15 CCCGTAA 20 7.025879E-4 45.0 43 CCGTAAC 20 7.025879E-4 45.0 44 TCTAAAC 20 7.025879E-4 45.0 34 GCGATAT 20 7.025879E-4 45.0 9 CCCCACG 20 7.025879E-4 45.0 38 CGTAACG 20 7.025879E-4 45.0 45 ACCCGTA 20 7.025879E-4 45.0 42 CAATCAC 20 7.025879E-4 45.0 42 ATCCGGT 25 3.884668E-5 44.999996 11 CGTAAGG 25 3.884668E-5 44.999996 2 TATCCGG 25 3.884668E-5 44.999996 10 TAGGGTA 125 0.0 43.2 5 TAACGGG 75 0.0 42.0 3 CACGGGC 65 0.0 41.538464 4 >>END_MODULE