##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935538.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 393906 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.049773296167107 31.0 30.0 33.0 28.0 34.0 2 31.014236899158682 31.0 31.0 34.0 28.0 34.0 3 30.848694866287897 31.0 30.0 34.0 27.0 34.0 4 34.75244855371586 35.0 35.0 37.0 32.0 37.0 5 34.71151239128117 35.0 35.0 37.0 32.0 37.0 6 34.88374383736221 35.0 35.0 37.0 32.0 37.0 7 35.32137870456403 36.0 35.0 37.0 33.0 37.0 8 34.994826176803606 37.0 35.0 37.0 32.0 37.0 9 36.76245347874874 39.0 37.0 39.0 32.0 39.0 10 36.075858199672005 37.0 35.0 39.0 32.0 39.0 11 36.4298919031444 38.0 35.0 39.0 32.0 39.0 12 36.638786918706494 39.0 35.0 39.0 32.0 39.0 13 36.63438739191584 39.0 35.0 39.0 32.0 39.0 14 37.704698582910645 39.0 37.0 41.0 33.0 41.0 15 37.781445319441694 39.0 37.0 41.0 33.0 41.0 16 37.8932435657238 39.0 37.0 41.0 33.0 41.0 17 37.66326737851163 39.0 36.0 41.0 33.0 41.0 18 37.68228460597199 39.0 36.0 41.0 33.0 41.0 19 37.60411621046646 39.0 37.0 40.0 33.0 41.0 20 37.445037648576054 39.0 36.0 41.0 32.0 41.0 21 37.61453747848471 39.0 36.0 41.0 33.0 41.0 22 37.71530263565419 39.0 36.0 41.0 33.0 41.0 23 37.66215543809945 39.0 36.0 41.0 33.0 41.0 24 37.63498651962651 40.0 36.0 41.0 32.0 41.0 25 37.39527704579265 39.0 36.0 41.0 32.0 41.0 26 37.36475961269948 39.0 36.0 41.0 32.0 41.0 27 37.31534934730621 39.0 36.0 41.0 32.0 41.0 28 37.221948891359865 39.0 36.0 41.0 31.0 41.0 29 37.25336501601905 39.0 36.0 41.0 31.0 41.0 30 37.01738231963971 39.0 36.0 41.0 31.0 41.0 31 37.07710976730489 39.0 36.0 41.0 31.0 41.0 32 36.89232456474387 39.0 36.0 41.0 31.0 41.0 33 36.85159149644839 39.0 35.0 41.0 31.0 41.0 34 36.796598680903564 39.0 36.0 41.0 31.0 41.0 35 36.76997557792976 39.0 36.0 41.0 30.0 41.0 36 36.573857722400774 39.0 35.0 41.0 30.0 41.0 37 36.53620660766782 39.0 35.0 41.0 30.0 41.0 38 36.428064055891504 39.0 35.0 41.0 30.0 41.0 39 36.34542758932334 39.0 35.0 41.0 30.0 41.0 40 36.32576553797099 39.0 35.0 41.0 30.0 41.0 41 36.20175879524557 39.0 35.0 40.0 29.0 41.0 42 36.24938690956726 39.0 35.0 41.0 30.0 41.0 43 36.22195904606683 39.0 35.0 40.0 30.0 41.0 44 36.34277721080664 39.0 35.0 41.0 30.0 41.0 45 36.39013876407061 39.0 35.0 41.0 30.0 41.0 46 36.27090219493991 39.0 35.0 40.0 30.0 41.0 47 36.188291115139144 39.0 35.0 40.0 30.0 41.0 48 36.16707793229857 39.0 35.0 40.0 29.0 41.0 49 36.20762821586876 39.0 35.0 40.0 30.0 41.0 50 36.044533467375466 39.0 35.0 40.0 29.0 41.0 51 34.957119211182366 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 4.0 9 12.0 10 17.0 11 21.0 12 11.0 13 9.0 14 19.0 15 16.0 16 29.0 17 54.0 18 108.0 19 309.0 20 660.0 21 1276.0 22 2066.0 23 2597.0 24 3056.0 25 3498.0 26 3779.0 27 3963.0 28 4464.0 29 5236.0 30 6669.0 31 8707.0 32 11422.0 33 15667.0 34 24556.0 35 28684.0 36 33294.0 37 50927.0 38 89279.0 39 93480.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.799713637263714 19.47698181799719 22.210375064101587 9.512929480637512 2 30.165826364665683 31.762907901885225 22.399252613567704 15.672013119881392 3 28.748483140647767 31.573776484745093 24.748290201215518 14.92945017339162 4 25.63961960467726 22.39315978939138 34.27315146253167 17.694069143399695 5 30.746929470482804 26.35679578376567 24.125806664534178 18.770468081217345 6 21.392159550755764 39.955725477652024 24.837143887120277 13.81497108447193 7 71.91766563596391 5.110102410219697 18.013180809634786 4.959051144181607 8 71.57291333465345 11.970622432763147 10.421521885932176 6.034942346651231 9 66.72962584982204 6.257076561413129 11.341284468883439 15.672013119881392 10 40.06412697445583 23.35404893553284 20.92885104568095 15.652973044330373 11 29.30115306697537 23.51423943783542 26.23468543256513 20.949922062624076 12 21.990779526079827 20.64426538311171 32.133808573619085 25.23114651718938 13 24.130630150340437 22.899625799048504 36.030677369727805 16.939066680883254 14 20.242646722822197 30.94672332993151 28.0955354830848 20.715094464161503 15 17.267825318730864 25.304768142653323 36.83086827821866 20.59653826039715 16 19.337100729615695 25.365696384416587 28.602001492741923 26.695201393225794 17 19.503637923768615 28.15240184206384 29.727650759318212 22.61630947484933 18 19.830365620224114 25.17402629053632 31.109452508974222 23.886155580265342 19 18.908572095880743 27.701025117667665 28.111021411199626 25.279381375251965 20 22.515016272917904 27.01888267759313 31.92284453651379 18.543256512975177 21 20.222083441227095 31.505993815783462 29.721557935141885 18.550364807847558 22 18.92735830375775 23.384005321066446 31.96930232085828 25.719334054317528 23 20.053515305682065 28.793925454296204 29.375028560113325 21.777530679908406 24 21.482028707356577 26.320746574055736 27.914273963839086 24.282950754748594 25 17.78952338882881 33.69077901834448 26.02219818941575 22.497499403410966 26 18.005564779414378 25.904403588673443 31.250095200377753 24.839936431534426 27 23.169487136524957 28.496392540352268 26.488553106578728 21.845567216544048 28 17.50392225556351 27.364904317273663 31.479337710012032 23.651835717150792 29 19.68312236929623 23.38832107152468 30.301391702588944 26.627164856590152 30 19.437886196199095 32.86824775454043 27.599731915736243 20.094134133524243 31 23.455849872812294 25.469782130762162 24.242078059232405 26.83228993719314 32 23.265195249628086 28.265626824673905 27.440049148781686 21.02912877691632 33 21.247201108894 27.902088315486434 25.70410199387671 25.146608581742854 34 21.081425517763122 23.589892004691475 26.437017968753967 28.891664508791436 35 22.100704228927714 26.036922514508536 26.428894203185532 25.433479053378218 36 21.905226119937243 27.190497225226324 26.951607743979526 23.952668910856907 37 19.31222169756236 27.230100582372447 31.657806684843592 21.799871035221603 38 22.17305651602159 27.4720364757074 26.145324011312344 24.209582996958666 39 20.87960071692231 24.714779668245722 30.30418424700309 24.10143536782887 40 21.56478956908501 26.092265667443503 28.1254918686184 24.217452894853086 41 19.347763171924264 25.115890593187206 27.3301244459338 28.20622178895473 42 22.834889542175034 23.267987794042234 31.041162104664565 22.855960559118166 43 21.954476448695882 24.016389697034317 29.741359613714945 24.287774240554853 44 20.641218971023545 23.971962854081937 29.575837890258082 25.810980284636436 45 20.723725965077964 22.63738049179246 27.535249526536788 29.10364401659279 46 25.25932582900489 25.312638040547746 26.965824333724292 22.462211796723075 47 18.082486684640497 25.25374074017659 34.36124354541439 22.30252902976852 48 21.059846765471963 24.653597558808446 28.12701507466248 26.159540601057106 49 20.784146471493198 21.371088533812635 34.76870116220621 23.076063832487954 50 21.426939422095625 21.556919671190588 30.964494067112458 26.05164683960133 51 19.73618071316507 21.311937365767466 27.556320543479917 31.395561377587544 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 118.0 1 221.5 2 325.0 3 1149.0 4 1973.0 5 1386.5 6 800.0 7 806.0 8 812.0 9 781.5 10 751.0 11 735.5 12 720.0 13 713.5 14 707.0 15 724.0 16 741.0 17 744.5 18 748.0 19 760.0 20 772.0 21 889.0 22 1006.0 23 1346.5 24 1687.0 25 1903.5 26 2389.5 27 2659.0 28 3256.0 29 3853.0 30 4572.5 31 5292.0 32 5977.0 33 6662.0 34 8222.0 35 9782.0 36 10700.0 37 11618.0 38 12542.0 39 13466.0 40 15370.5 41 17275.0 42 19338.5 43 21402.0 44 24667.0 45 27932.0 46 46259.5 47 64587.0 48 55750.5 49 46914.0 50 45837.0 51 44760.0 52 37135.5 53 29511.0 54 25832.0 55 22153.0 56 19012.5 57 15872.0 58 13719.0 59 11566.0 60 10212.5 61 8859.0 62 7438.0 63 6017.0 64 5059.5 65 4102.0 66 3521.0 67 2940.0 68 2193.0 69 1446.0 70 1101.5 71 757.0 72 630.0 73 503.0 74 394.5 75 268.0 76 250.0 77 166.0 78 82.0 79 66.5 80 51.0 81 31.5 82 12.0 83 11.0 84 10.0 85 5.5 86 1.0 87 2.5 88 4.0 89 2.0 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 393906.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.77838414908526 #Duplication Level Percentage of deduplicated Percentage of total 1 74.45160571092683 31.104677839073307 2 10.338004179432508 8.638102198863606 3 3.7769564655209025 4.733854143927107 4 2.208423573070917 3.690574735986089 5 1.5684050617704872 3.27627145860086 6 1.2332795218830643 3.0914655377058518 7 0.9798669631059518 2.865608087974661 8 0.8464782003943186 2.829159314392018 9 0.6621939976106376 2.48988556920561 >10 3.8544229893454904 24.17558035727304 >50 0.046623004636294 1.3442616144577486 >100 0.025151884080105973 1.8655634493113349 >500 0.0024538423492786315 0.7717009954494339 >1k 0.004294224111237605 3.0604057079580507 >5k 0.0018403817619589734 6.062888989821259 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGC 8306 2.1086249003569377 No Hit GAATCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTC 8217 2.086030677369728 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCG 7133 1.8108381187389884 No Hit GCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGC 3504 0.8895523297436444 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCT 1663 0.4221819418846121 No Hit GAACTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCT 1587 0.4028879986595787 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAGTACGTT 1469 0.3729316131259742 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAGTACGTTCGTA 1392 0.3533838022269272 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTC 1265 0.32114260762720037 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1061 0.2693536021284266 No Hit CCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGC 907 0.23025798033033262 No Hit CTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGCT 876 0.2223880824359111 Illumina Single End Adapter 2 (95% over 21bp) GAATGCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTT 709 0.17999218087564037 No Hit TCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGC 519 0.1317573228130569 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.077353480271943E-4 0.0 0.0 0.2320350540484278 0.0 2 5.077353480271943E-4 0.0 0.0 1.6336384822774976 0.0 3 7.616030220407914E-4 0.0 0.0 2.043888643483471 0.0 4 7.616030220407914E-4 0.0 0.0 2.9997004361446638 0.0 5 7.616030220407914E-4 0.0 0.0 6.5830426548465875 0.0 6 7.616030220407914E-4 0.0 0.0 7.611968337623697 0.0 7 7.616030220407914E-4 0.0 0.0 8.839164673805426 0.0 8 7.616030220407914E-4 0.0 0.0 10.432945931262788 0.0 9 7.616030220407914E-4 0.0 0.0 10.838372606662503 0.0 10 7.616030220407914E-4 0.0 0.0 13.776383198021863 0.0 11 7.616030220407914E-4 0.0 0.0 15.534162972892009 0.0 12 7.616030220407914E-4 0.0 0.0 19.038552344975706 0.0 13 7.616030220407914E-4 0.0 0.0 19.678552751163984 0.0 14 7.616030220407914E-4 0.0 0.0 19.984971033698397 0.0 15 7.616030220407914E-4 0.0 0.0 20.730834259950342 0.0 16 7.616030220407914E-4 0.0 0.0 21.667352109386503 0.0 17 7.616030220407914E-4 0.0 0.0 22.862307250968506 0.0 18 7.616030220407914E-4 0.0 0.0 24.023244124232686 0.0 19 7.616030220407914E-4 0.0 0.0 25.22124567790285 0.0 20 7.616030220407914E-4 0.0 0.0 25.984625773661737 0.0 21 7.616030220407914E-4 0.0 0.0 26.858692175290553 0.0 22 7.616030220407914E-4 0.0 0.0 27.860454016948207 0.0 23 7.616030220407914E-4 0.0 0.0 28.822866369133752 0.0 24 7.616030220407914E-4 0.0 0.0 29.565937050971552 0.0 25 7.616030220407914E-4 0.0 0.0 30.21710763481643 0.0 26 7.616030220407914E-4 0.0 0.0 30.827405523145117 0.0 27 7.616030220407914E-4 0.0 0.0 31.48543053418836 0.0 28 7.616030220407914E-4 0.0 0.0 32.11222982132793 0.0 29 7.616030220407914E-4 0.0 0.0 32.75705371332247 0.0 30 7.616030220407914E-4 0.0 0.0 33.42751824039238 0.0 31 7.616030220407914E-4 0.0 0.0 34.09772889978827 0.0 32 7.616030220407914E-4 0.0 0.0 34.70244169928866 0.0 33 7.616030220407914E-4 0.0 0.0 35.304361954374905 0.0 34 7.616030220407914E-4 0.0 0.0 35.90298192969897 0.0 35 7.616030220407914E-4 0.0 0.0 36.483323432494046 0.0 36 7.616030220407914E-4 0.0 0.0 37.04462485973811 0.0 37 7.616030220407914E-4 0.0 0.0 37.63029758368748 0.0 38 0.0010154706960543887 0.0 0.0 38.215970307636844 0.0 39 0.0010154706960543887 0.0 0.0 38.8181444303971 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATGC 60 0.0 45.000004 9 CTAGCGG 30 2.1618544E-6 45.000004 2 CGGCGAA 140 0.0 45.0 31 ACCGGGT 20 7.027634E-4 45.0 4 CCGATCG 40 6.7957444E-9 45.0 40 GGCCGAT 20 7.027634E-4 45.0 8 CCGGAGC 20 7.027634E-4 45.0 14 TACGGAG 20 7.027634E-4 45.0 29 CTAACGG 20 7.027634E-4 45.0 2 CGCTCGA 35 1.2092096E-7 45.0 41 TCTACGG 20 7.027634E-4 45.0 2 CGCAGAT 20 7.027634E-4 45.0 28 GTATACG 20 7.027634E-4 45.0 1 CTCGAAT 70 0.0 45.0 43 CGATCGA 90 0.0 45.0 41 TACGGCT 965 0.0 42.668392 7 CGATGAA 885 0.0 42.457626 19 ACGGCTG 980 0.0 42.015305 8 CCGATGA 870 0.0 41.896553 18 TTAGCGG 65 0.0 41.53846 2 >>END_MODULE