##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935537.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 445469 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.116156230848837 31.0 31.0 33.0 28.0 34.0 2 31.1658319658607 31.0 31.0 34.0 28.0 34.0 3 30.907261784770657 31.0 30.0 34.0 27.0 34.0 4 34.6834796585172 35.0 35.0 37.0 32.0 37.0 5 34.7437868852827 35.0 35.0 37.0 32.0 37.0 6 34.951525246425675 36.0 35.0 37.0 32.0 37.0 7 35.308876711959755 37.0 35.0 37.0 33.0 37.0 8 35.15689531707032 37.0 35.0 37.0 32.0 37.0 9 37.11572971407662 39.0 37.0 39.0 34.0 39.0 10 36.445797575139906 38.0 35.0 39.0 32.0 39.0 11 36.68643160354593 39.0 35.0 39.0 32.0 39.0 12 36.91422074263305 39.0 37.0 39.0 33.0 39.0 13 37.02727462517033 39.0 37.0 39.0 33.0 39.0 14 38.14088746916171 40.0 37.0 41.0 33.0 41.0 15 38.273671119651425 40.0 38.0 41.0 34.0 41.0 16 38.25177285063607 40.0 37.0 41.0 34.0 41.0 17 38.1039174443115 40.0 37.0 41.0 33.0 41.0 18 37.99024847969219 39.0 37.0 41.0 33.0 41.0 19 37.78537451539838 39.0 37.0 41.0 33.0 41.0 20 37.709676767631414 39.0 36.0 41.0 33.0 41.0 21 37.69979729229195 39.0 36.0 41.0 33.0 41.0 22 37.80182010420478 39.0 36.0 41.0 33.0 41.0 23 37.83464169223897 40.0 36.0 41.0 33.0 41.0 24 37.80860621053317 40.0 36.0 41.0 33.0 41.0 25 37.424000323254816 39.0 35.0 41.0 33.0 41.0 26 37.483714916189456 39.0 35.0 41.0 33.0 41.0 27 37.55205861687345 39.0 35.0 41.0 33.0 41.0 28 37.4365376715327 39.0 35.0 41.0 33.0 41.0 29 37.4000076324054 40.0 35.0 41.0 33.0 41.0 30 37.08406645580276 39.0 35.0 41.0 32.0 41.0 31 36.99576177017929 39.0 35.0 41.0 31.0 41.0 32 36.81992686359769 39.0 35.0 41.0 31.0 41.0 33 36.60808271731591 40.0 35.0 41.0 30.0 41.0 34 36.35661291807062 40.0 35.0 41.0 29.0 41.0 35 36.28826023808615 40.0 35.0 41.0 29.0 41.0 36 36.10318787614851 40.0 35.0 41.0 27.0 41.0 37 36.120854649818504 40.0 35.0 41.0 27.0 41.0 38 35.95624835847163 39.0 35.0 41.0 27.0 41.0 39 35.84482421896922 39.0 35.0 41.0 26.0 41.0 40 35.74995790952906 39.0 35.0 41.0 25.0 41.0 41 35.564212100056345 39.0 35.0 41.0 24.0 41.0 42 35.618415647328995 39.0 35.0 41.0 25.0 41.0 43 35.610754059205014 39.0 35.0 41.0 24.0 41.0 44 35.63212928396813 39.0 35.0 41.0 24.0 41.0 45 35.62965324186419 39.0 35.0 41.0 24.0 41.0 46 35.51143850638316 39.0 35.0 41.0 24.0 41.0 47 35.45345018396342 39.0 35.0 41.0 24.0 41.0 48 35.397524855826106 39.0 35.0 41.0 24.0 41.0 49 35.35878590878377 39.0 35.0 41.0 24.0 41.0 50 35.26040420321055 39.0 35.0 41.0 24.0 41.0 51 34.16822494943531 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 15.0 9 24.0 10 28.0 11 20.0 12 22.0 13 24.0 14 23.0 15 29.0 16 46.0 17 105.0 18 185.0 19 352.0 20 690.0 21 1179.0 22 1685.0 23 2642.0 24 3828.0 25 5829.0 26 7512.0 27 7778.0 28 7497.0 29 7076.0 30 7564.0 31 9097.0 32 11338.0 33 15364.0 34 24292.0 35 29663.0 36 34557.0 37 53016.0 38 96085.0 39 117889.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.70900556492146 19.74368586815244 21.76874260610727 17.778565960818824 2 37.29844276481641 24.58756950539768 22.90552204530506 15.208465684480851 3 28.82400346600998 24.545591275711665 31.626667624458715 15.003737633819636 4 25.26550669070126 23.112943886106553 33.881145489360655 17.740403933831537 5 24.474430319505956 27.345337161508432 29.721933512769688 18.45829900621592 6 22.706181574924404 32.62651273152565 30.08222794403202 14.585077749517925 7 72.75814927638062 4.9974296752411504 17.515023492094848 4.729397556283377 8 73.39006754678776 6.0648440183267525 15.276708368034589 5.2683800668508916 9 67.8271664245997 6.992854721652909 16.813291160552136 8.366687693195262 10 33.11880287966166 30.07616691621639 23.269857161777814 13.535173042344137 11 23.88269441869131 23.992915331931066 34.014488101304465 18.109902148073154 12 21.706560950369163 21.027725835018824 37.18036496366751 20.08534825094451 13 21.58960556177871 22.310643389326753 38.54791242488254 17.551838624011996 14 17.637366460965858 27.636042014146888 34.90613263773686 19.820458887150398 15 16.248942126163662 26.347287914535016 38.980490224909026 18.423279734392292 16 19.494959245200004 25.964545232103692 35.100983457883714 19.439512064812593 17 19.22849850382406 26.28218798614494 33.77878146403005 20.710532046000957 18 19.984780085707424 26.11831575261129 33.43554770365615 20.461356458025136 19 19.56499778884726 27.832688694387265 31.82600809483937 20.776305421926107 20 21.613625190529532 26.723520604127337 33.19939210135834 18.46346210398479 21 21.16376223710292 27.559044512637243 33.398283606715616 17.87890964354422 22 19.63346495491269 23.923550235818876 34.24256233318143 22.200422476087 23 19.272497076115286 26.62811553665912 34.14670830068983 19.952679086535763 24 20.380542753816762 24.78264480805623 33.97542814427042 20.861384293856585 25 19.851661956275297 28.081639799851395 31.31329003813958 20.75340820573373 26 18.877183373029325 26.48601810675939 32.31515548781172 22.32164303239956 27 21.167578439801645 25.8172847044351 31.621729009201538 21.39340784656171 28 18.160859678226767 25.791918180614136 33.74802735992852 22.299194781230568 29 19.06283041019689 23.818716902859684 32.44557982710357 24.672872859839853 30 19.245110209689116 24.31639463127625 32.72999916941471 23.70849598961993 31 19.149031694685824 25.14406165187701 31.568975618954404 24.137931034482758 32 20.124408207978558 25.50794780332638 30.975892823069618 23.39175116562544 33 19.558263313496564 25.329484206532886 31.85384392628892 23.258408553681626 34 19.14005239421823 26.696358220212858 31.65315656083813 22.51043282473079 35 20.416684438198843 25.890241520734325 29.34704771824751 24.34602632281932 36 19.43771620471907 29.000671202709956 29.999842862241817 21.561769730329157 37 18.995036691666538 28.192758643137907 30.64141388065163 22.170790784543932 38 19.865579872000072 26.879535949751837 30.362831083644426 22.892053094603664 39 20.906280796194572 26.265800762791574 30.126226516323246 22.701691924690607 40 21.31394103742348 25.439031672237572 32.34590959191324 20.901117698425704 41 19.065075235313795 28.500299684153106 30.26001809329044 22.174606987242658 42 21.240984221124254 27.14150704089398 29.93586534641019 21.68164339157158 43 20.778774729554694 26.576035593947054 30.14238925716492 22.502800419333333 44 20.474151961191463 25.403787917902253 29.927559493477663 24.19450062742862 45 20.19983433190637 24.211785780828745 29.591733655989533 25.99664623127535 46 21.61631898066981 25.699431385797887 29.33492566261625 23.349323970916046 47 19.47744960928819 25.47764266424824 32.38541851397067 22.6594892124929 48 19.415267953550078 25.190080566773442 31.06186962504686 24.332781854629616 49 19.768603426950023 24.327169791837367 32.93203342993564 22.972193351276967 50 18.69961770628259 24.042974932037918 33.106231859007025 24.151175502672466 51 18.4921958654811 23.61892746745565 31.0075448572179 26.881331809845356 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 144.0 1 278.0 2 412.0 3 5211.5 4 10011.0 5 6829.5 6 3648.0 7 3477.5 8 3307.0 9 3312.0 10 3317.0 11 3204.0 12 3091.0 13 2935.5 14 2780.0 15 2702.0 16 2624.0 17 2540.5 18 2457.0 19 2360.5 20 2264.0 21 2281.0 22 2298.0 23 2495.5 24 2693.0 25 2859.0 26 3755.0 27 4485.0 28 5142.5 29 5800.0 30 6933.0 31 8066.0 32 9196.5 33 10327.0 34 11717.5 35 13108.0 36 14470.0 37 15832.0 38 16894.0 39 17956.0 40 19698.0 41 21440.0 42 22907.0 43 24374.0 44 26564.0 45 28754.0 46 39878.0 47 51002.0 48 47383.5 49 43765.0 50 42066.5 51 40368.0 52 34862.0 53 29356.0 54 25297.5 55 21239.0 56 18777.0 57 16315.0 58 15405.0 59 14495.0 60 13463.0 61 12431.0 62 11177.0 63 9923.0 64 7999.5 65 6076.0 66 4738.0 67 3400.0 68 2685.0 69 1970.0 70 1621.5 71 1273.0 72 1014.0 73 755.0 74 599.5 75 345.5 76 247.0 77 174.0 78 101.0 79 69.0 80 37.0 81 31.0 82 25.0 83 25.5 84 26.0 85 16.5 86 7.0 87 3.5 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 445469.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.93568571525791 #Duplication Level Percentage of deduplicated Percentage of total 1 73.78151408225172 33.15422928395939 2 9.5276701217543 8.562647803796084 3 4.135271840754623 5.574638273499174 4 2.747534261160171 4.938493442055872 5 1.9655949387641198 4.416267820590305 6 1.5502810020861184 4.179776392804615 7 1.2754761574829236 4.012007702497022 8 1.0138997486372328 3.6448224361233352 9 0.8108532025953208 3.2792620205730314 >10 3.1353525032926197 19.94579830207134 >50 0.036354947927701824 1.1228968348805113 >100 0.011613386143563916 0.9806344959287082 >500 0.004039438658630927 1.2093433279268893 >1k 0.004039438658630927 3.6420973920980155 >5k 5.049298323288659E-4 1.3370844711957144 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5893 1.3228754413887387 No Hit GAATCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTC 4833 1.0849239789974163 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGC 2136 0.47949464496968364 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCG 1939 0.4352715901667681 No Hit GCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGC 1696 0.38072233982611586 Illumina Single End Adapter 1 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCT 1620 0.36366166893768137 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTT 1481 0.3324585998127816 No Hit CGTTCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTC 1222 0.2743176292850905 No Hit CGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTG 1125 0.25254282565116765 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCT 887 0.19911598786896506 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTT 763 0.17128015641941413 No Hit CCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGC 734 0.16477016358040628 Illumina Single End Adapter 1 (95% over 21bp) CGTCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCT 694 0.1557908631128092 No Hit CTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGCT 589 0.1322201993853669 Illumina Single End Adapter 1 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCT 565 0.12683261910480864 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTC 551 0.12368986394114966 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCC 547 0.12279193389438994 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.734475350697803E-4 0.0 0.0 0.13962812227113447 0.0 2 6.734475350697803E-4 0.0 0.0 0.8108308322240156 0.0 3 6.734475350697803E-4 0.0 0.0 1.2698975686299159 0.0 4 6.734475350697803E-4 0.0 0.0 2.1447059166855604 0.0 5 6.734475350697803E-4 0.0 0.0 4.44767200411252 0.0 6 6.734475350697803E-4 0.0 0.0 5.9822344540248595 0.0 7 6.734475350697803E-4 0.0 0.0 7.108463215173222 0.0 8 6.734475350697803E-4 0.0 0.0 8.541110604778336 0.0 9 6.734475350697803E-4 0.0 0.0 9.16786577741661 0.0 10 6.734475350697803E-4 0.0 0.0 10.547984259286281 0.0 11 6.734475350697803E-4 0.0 0.0 11.757271549759915 0.0 12 8.979300467597072E-4 0.0 0.0 13.21483649816261 0.0 13 8.979300467597072E-4 0.0 0.0 13.751349701101535 0.0 14 8.979300467597072E-4 0.0 0.0 14.046993168997169 0.0 15 0.001122412558449634 0.0 0.0 14.433552054127222 0.0 16 0.001122412558449634 0.0 0.0 14.968269396972628 0.0 17 0.001122412558449634 0.0 0.0 15.657879672884084 0.0 18 0.001122412558449634 0.0 0.0 16.37981543047889 0.0 19 0.001122412558449634 0.0 0.0 16.935409646911456 0.0 20 0.001122412558449634 0.0 0.0 17.41647566946297 0.0 21 0.001122412558449634 0.0 0.0 17.958151970170764 0.0 22 0.001122412558449634 0.0 0.0 18.58782541546101 0.0 23 0.001122412558449634 0.0 0.0 19.168112708179468 0.0 24 0.001122412558449634 0.0 0.0 19.616628766535943 0.0 25 0.001122412558449634 0.0 0.0 20.0498800140975 0.0 26 0.001122412558449634 0.0 0.0 20.44541819969515 0.0 27 0.001122412558449634 0.0 0.0 20.87844496474502 0.0 28 0.001122412558449634 0.0 0.0 21.31775724012221 0.0 29 0.001122412558449634 0.0 0.0 21.76919157113065 0.0 30 0.001122412558449634 0.0 0.0 22.25497172642765 0.0 31 0.001122412558449634 0.0 0.0 22.72571155344143 0.0 32 0.001122412558449634 0.0 0.0 23.168391066493964 0.0 33 0.001122412558449634 0.0 0.0 23.62117229257255 0.0 34 0.001122412558449634 0.0 0.0 24.046791134736647 0.0 35 0.001122412558449634 0.0 0.0 24.49261340295284 0.0 36 0.001122412558449634 0.0 0.0 24.912395699813008 0.0 37 0.001122412558449634 0.0 0.0 25.35889141556427 0.0 38 0.001122412558449634 0.0 0.0 25.81638677438834 0.0 39 0.001122412558449634 0.0 0.0 26.286228671355357 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGGC 25 3.886946E-5 45.0 4 GCGCGAC 35 1.2096825E-7 45.0 9 GTAATCG 20 7.02863E-4 45.0 1 AATTGCG 20 7.02863E-4 45.0 1 TCGAGAG 20 7.02863E-4 45.0 1 ATCGGGC 20 7.02863E-4 45.0 4 GCCAACG 25 3.886946E-5 45.0 1 TATCCGG 20 7.02863E-4 45.0 2 CTAACGG 30 2.1624965E-6 44.999996 2 CGTTTTT 3365 0.0 44.063892 1 CGATGAA 310 0.0 42.096775 19 TAGACGG 65 0.0 41.538464 2 CCGATCG 50 1.0786607E-9 40.5 40 TACGAAT 50 1.0786607E-9 40.5 12 ACGGGTC 45 1.9237632E-8 40.0 5 TGACGGG 175 0.0 39.857143 3 TACGGGA 205 0.0 39.512196 4 CCGATGA 325 0.0 39.46154 18 CGCGACC 40 3.4518598E-7 39.375 10 GTTACGG 80 0.0 39.375 2 >>END_MODULE