##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935533.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 350661 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.270258169571182 31.0 31.0 33.0 28.0 34.0 2 31.319091658325277 31.0 31.0 34.0 28.0 34.0 3 31.056191022098265 31.0 31.0 34.0 27.0 34.0 4 34.796906413886916 35.0 35.0 37.0 32.0 37.0 5 34.865921787709496 35.0 35.0 37.0 33.0 37.0 6 35.052957129535365 37.0 35.0 37.0 32.0 37.0 7 35.450027234280405 37.0 35.0 37.0 33.0 37.0 8 35.3494058364061 37.0 35.0 37.0 33.0 37.0 9 37.315039311471764 39.0 37.0 39.0 34.0 39.0 10 36.60618089836053 38.0 35.0 39.0 32.0 39.0 11 36.78393377079287 39.0 37.0 39.0 33.0 39.0 12 36.8392692657581 39.0 35.0 39.0 33.0 39.0 13 36.85764884033297 39.0 37.0 39.0 33.0 39.0 14 37.80843036436901 40.0 37.0 41.0 33.0 41.0 15 38.042254485101 40.0 37.0 41.0 33.0 41.0 16 38.039225919050025 40.0 37.0 41.0 33.0 41.0 17 37.949395570080505 40.0 37.0 41.0 33.0 41.0 18 37.861130835764456 39.0 37.0 41.0 33.0 41.0 19 37.675213382725765 39.0 37.0 41.0 33.0 41.0 20 37.667852997624486 39.0 35.0 41.0 33.0 41.0 21 37.59771973501473 39.0 35.0 41.0 33.0 41.0 22 37.701058857415 39.0 35.0 41.0 33.0 41.0 23 37.78120178748136 39.0 35.0 41.0 34.0 41.0 24 37.77887190192237 40.0 35.0 41.0 34.0 41.0 25 37.331796236250966 39.0 35.0 41.0 33.0 41.0 26 37.44329708750046 39.0 35.0 41.0 33.0 41.0 27 37.50586749025412 39.0 35.0 41.0 33.0 41.0 28 37.3679593681647 39.0 35.0 41.0 33.0 41.0 29 37.26438069816717 39.0 35.0 41.0 33.0 41.0 30 36.92915950162693 39.0 35.0 41.0 32.0 41.0 31 36.86199206641172 39.0 35.0 41.0 31.0 41.0 32 36.7800896022084 39.0 35.0 41.0 31.0 41.0 33 36.63362906054566 39.0 35.0 41.0 31.0 41.0 34 36.398852452938876 39.0 35.0 41.0 30.0 41.0 35 36.340688014920396 39.0 35.0 41.0 30.0 41.0 36 36.15876587359301 39.0 35.0 41.0 29.0 41.0 37 36.163536863238285 39.0 35.0 41.0 30.0 41.0 38 35.97234936306005 39.0 35.0 41.0 29.0 41.0 39 35.84369519279304 39.0 35.0 41.0 28.0 41.0 40 35.76474714895583 39.0 35.0 41.0 28.0 41.0 41 35.560875033151675 39.0 35.0 41.0 26.0 41.0 42 35.603243588537076 39.0 35.0 41.0 27.0 41.0 43 35.57667376754187 38.0 35.0 41.0 27.0 41.0 44 35.54046500751438 38.0 35.0 40.0 27.0 41.0 45 35.53517784983217 38.0 35.0 40.0 27.0 41.0 46 35.43072083864473 38.0 35.0 40.0 27.0 41.0 47 35.42123304273928 38.0 35.0 40.0 27.0 41.0 48 35.333937905840685 38.0 35.0 40.0 27.0 41.0 49 35.25035005318527 38.0 35.0 40.0 26.0 41.0 50 35.14957180866991 38.0 34.0 40.0 26.0 41.0 51 33.9963183815708 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 10.0 9 25.0 10 29.0 11 20.0 12 23.0 13 23.0 14 20.0 15 35.0 16 50.0 17 81.0 18 163.0 19 264.0 20 432.0 21 693.0 22 1109.0 23 1658.0 24 2493.0 25 3746.0 26 5120.0 27 5452.0 28 5544.0 29 5684.0 30 6406.0 31 7347.0 32 9959.0 33 14607.0 34 25136.0 35 26042.0 36 27524.0 37 41716.0 38 72702.0 39 86526.0 40 20.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.2960722749322 20.33587995243269 23.109498917758174 17.25854885487693 2 37.79804426497386 21.808527324110752 24.15409754720371 16.239330863711675 3 30.966089756203285 22.303877534142664 31.204496650611276 15.52553605904278 4 27.889329010069552 23.680135515497874 29.815405762260415 18.615129712172156 5 23.816164329651716 28.516145222879075 28.96900425196985 18.698686195499356 6 23.989836337659447 32.39424971696311 28.878033200156278 14.737880745221169 7 76.42994230895366 5.502465344021719 13.487100076712267 4.580492270312353 8 78.55364582887746 4.555396807743091 12.591363168416219 4.299594194963227 9 73.11876712836614 6.5156946452556745 14.349471426819635 6.016066799558549 10 39.64740875090187 26.06163787817864 20.67153176429657 13.61942160662292 11 28.684398892377537 23.698101585291777 29.5923983562472 18.02510116608348 12 26.477709240548563 20.843207542327207 33.817561690635685 18.861521526488545 13 24.95373024088792 20.876858276226898 35.13507347552194 19.034338007363235 14 19.84195562095585 24.35001326067056 35.64696387679269 20.1610672415809 15 19.35459033083234 24.07196694243158 37.070275850465265 19.503166876270814 16 23.615685804808635 23.95561525233773 33.42088227661474 19.007816666238902 17 24.30267409264218 23.416347982809608 31.305448852310352 20.97552907223786 18 24.950022956644737 23.462261272282916 32.10565189741659 19.482063873655754 19 23.843826373620107 25.91505756271727 30.324729582132033 19.916386481530594 20 23.802475895523028 26.182552379648723 30.34725846330216 19.66771326152609 21 24.164363872800227 25.719712200672447 31.923139442367415 18.192784484159915 22 22.242849931985592 23.191914698241323 33.25491001280439 21.310325356968697 23 21.570975956835806 24.340887637918105 32.72163143320757 21.366504972038523 24 22.463005580888666 24.448684056681525 31.969337907551736 21.118972454878072 25 22.912442501447266 25.040423657036282 30.16674223823009 21.880391603286363 26 20.708319431017422 24.481764439159186 31.06875301216845 23.741163117654942 27 21.387037623231553 23.812171869697515 32.622105110063565 22.178685397007367 28 21.149201080245593 25.396893295804208 31.60773510598555 21.846170517964644 29 22.415951588571296 24.84507829499146 31.827320403466597 20.911649712970647 30 24.397352428698944 23.633081523180508 31.96106781193232 20.008498236188228 31 24.300392686954066 24.80315746547235 30.73395672743761 20.16249312013597 32 25.340998856445403 25.35269106059699 29.428422322413955 19.877887760543658 33 25.02616487148557 24.082803619450125 30.12539176013301 20.765639748931303 34 22.465572162287796 25.03700154850411 31.373891022953792 21.123535266254304 35 23.102084349271802 26.25070937458115 29.906091638362973 20.74111463778407 36 24.448398880970508 27.212892223543538 28.72660489760766 19.612103997878293 37 23.57690190811068 28.146272325693477 28.024502297090354 20.25232346910549 38 23.583460949464012 26.50337505453986 28.702079786460427 21.211084209535706 39 23.630229766070364 25.163334388483467 28.234106444685892 22.972329400760277 40 24.458665206567026 23.95447454949367 29.683369408060777 21.903490835878525 41 21.88267300897448 24.968844553571685 29.71245733058424 23.4360251068696 42 21.89522074025911 25.85887794764744 29.980807674648734 22.26509363744471 43 22.03039402727991 25.514100513031103 29.804854260952883 22.650651198736103 44 22.709967746627086 24.605245522028397 29.83080525065519 22.853981480689324 45 22.40026692446551 23.989551161948437 29.414733888285266 24.195448025300788 46 22.271937854509055 25.157345698552163 29.644585511362827 22.926130935575955 47 21.505385543302506 24.43442527113081 31.12521780294929 22.9349713826174 48 21.181996287012243 25.410296554221883 30.6800585180559 22.727648640709972 49 22.37859357042842 24.635474147395918 30.81665768363177 22.169274598543893 50 20.82238971542316 24.12187269185909 31.827605579177607 23.228132013540144 51 21.120398333433144 23.69182771964946 30.946412632143293 24.2413613147741 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 152.0 1 326.5 2 501.0 3 4202.0 4 7903.0 5 5090.0 6 2277.0 7 2236.5 8 2196.0 9 2151.5 10 2107.0 11 2028.0 12 1949.0 13 1905.0 14 1861.0 15 1748.0 16 1635.0 17 1553.0 18 1471.0 19 1474.0 20 1477.0 21 1410.5 22 1344.0 23 1481.0 24 1618.0 25 1912.0 26 2624.5 27 3043.0 28 3417.5 29 3792.0 30 4553.5 31 5315.0 32 6117.5 33 6920.0 34 8166.0 35 9412.0 36 10085.0 37 10758.0 38 11614.5 39 12471.0 40 13246.5 41 14022.0 42 15164.0 43 16306.0 44 18206.5 45 20107.0 46 23402.5 47 26698.0 48 28498.0 49 30298.0 50 30236.5 51 30175.0 52 27118.5 53 24062.0 54 22330.0 55 20598.0 56 19899.0 57 19200.0 58 18428.5 59 17657.0 60 16225.5 61 14794.0 62 13181.5 63 11569.0 64 10115.5 65 8662.0 66 7223.5 67 5785.0 68 4859.5 69 3934.0 70 3288.0 71 2642.0 72 2175.0 73 1708.0 74 1350.0 75 771.5 76 551.0 77 428.0 78 305.0 79 201.5 80 98.0 81 72.5 82 47.0 83 36.0 84 25.0 85 16.5 86 8.0 87 6.5 88 5.0 89 3.5 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 350661.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.405152142392225 #Duplication Level Percentage of deduplicated Percentage of total 1 70.09891755280539 29.725552638437208 2 9.396452967766983 7.969160353939836 3 4.694237681466841 5.971795892254557 4 3.3251527196049513 5.640144278861489 5 2.4934400684500386 5.286735273028038 6 2.0380473802823036 5.185422554056499 7 1.6831197195983978 4.996106344840142 8 1.2972090602397996 4.400667804796667 9 1.055874935216746 4.029708354408418 >10 3.8727244819434286 22.148826209682536 >50 0.024449145068265826 0.7035634491930324 >100 0.01697857296407349 1.6427040172726388 >500 0.002716571674251758 0.8121362778241307 >1k 0.0 0.0 >5k 6.791429185629395E-4 1.4874765514048351 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5165 1.4729325473890738 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTT 854 0.24354005720624763 No Hit CGCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTG 748 0.21331143183872742 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTC 664 0.18935667211352275 No Hit GAATCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTC 554 0.1579873439019452 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCT 460 0.1311808270665971 No Hit CCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTGC 456 0.13004012422253972 No Hit GCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTGC 422 0.12034415004805211 No Hit CGTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCT 403 0.11492581153877961 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 376 0.10722606734139241 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08697859185937415 0.0 2 0.0 0.0 0.0 0.39411283262181995 0.0 3 0.0 0.0 0.0 0.7406013215042448 0.0 4 0.0 0.0 0.0 1.0919377974739135 0.0 5 0.0 0.0 0.0 2.027599305311968 0.0 6 0.0 0.0 0.0 3.017159022531733 0.0 7 0.0 0.0 0.0 3.743786734196275 0.0 8 0.0 0.0 0.0 4.745038655567628 0.0 9 0.0 0.0 0.0 5.387824708193953 0.0 10 0.0 0.0 0.0 6.285843022178115 0.0 11 0.0 0.0 0.0 7.202682933089223 0.0 12 0.0 0.0 0.0 7.954406107323027 0.0 13 0.0 0.0 0.0 8.355363157009192 0.0 14 0.0 0.0 0.0 8.613732351188185 0.0 15 0.0 0.0 0.0 8.825332728760825 0.0 16 0.0 0.0 0.0 9.167543581978036 0.0 17 0.0 0.0 0.0 9.558804657489713 0.0 18 0.0 0.0 0.0 9.980579534079924 0.0 19 0.0 0.0 0.0 10.276306746401795 0.0 20 0.0 0.0 0.0 10.555493767484835 0.0 21 0.0 0.0 0.0 10.890004876504658 0.0 22 0.0 0.0 0.0 11.240771001052298 0.0 23 0.0 0.0 0.0 11.572430352961977 0.0 24 0.0 0.0 0.0 11.852758076889074 0.0 25 0.0 0.0 0.0 12.100290594049524 0.0 26 0.0 0.0 0.0 12.366644708136919 0.0 27 0.0 0.0 0.0 12.661231217614734 0.0 28 0.0 0.0 0.0 12.942699644385888 0.0 29 0.0 0.0 0.0 13.234149221042545 0.0 30 0.0 0.0 0.0 13.591189211232502 0.0 31 0.0 0.0 0.0 13.891479234930603 0.0 32 0.0 0.0 0.0 14.238252899524042 0.0 33 0.0 0.0 0.0 14.597574295402111 0.0 34 0.0 0.0 0.0 14.962884381211483 0.0 35 0.0 0.0 0.0 15.32790929130984 0.0 36 0.0 0.0 0.0 15.6353287077833 0.0 37 0.0 0.0 0.0 15.97554333102341 0.0 38 0.0 0.0 0.0 16.399599613301735 0.0 39 0.0017110542660860489 0.0 0.0 17.034115570308646 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGCG 25 3.885243E-5 45.0 1 CGCATAC 20 7.0265745E-4 45.0 26 GGCCGAT 20 7.0265745E-4 45.0 8 GTTAGCG 20 7.0265745E-4 45.0 1 ATATGCG 20 7.0265745E-4 45.0 1 AGACACG 20 7.0265745E-4 45.0 24 CTCGAGG 20 7.0265745E-4 45.0 2 CGTAAGG 50 2.1827873E-11 45.0 2 CGGTCTA 25 3.885243E-5 45.0 31 CGCACGG 25 3.885243E-5 45.0 2 CGTTTTT 2190 0.0 43.356163 1 ATAGCGG 45 1.9217623E-8 40.0 2 ACGGGAT 165 0.0 39.545456 5 ACGGGTC 40 3.4490586E-7 39.375 5 AAACGGG 80 0.0 39.375 3 CACGACG 35 6.2358795E-6 38.571426 26 GCTACGG 35 6.2358795E-6 38.571426 2 GCGTAAG 35 6.2358795E-6 38.571426 1 ATCGTAG 30 1.1383045E-4 37.500004 1 GCGTATG 30 1.1383045E-4 37.500004 1 >>END_MODULE