SRR2935532.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935532.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	365611
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC	1053	0.2880110281145808	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	901	0.24643678663935167	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	762	0.20841823686924082	No Hit
CCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC	744	0.2034949714313847	No Hit
CTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGCT	589	0.1611001857165129	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCCCTA	20	7.026968E-4	45.000004	9
TTCTAGA	40	6.7939254E-9	45.000004	39
GGTAATT	20	7.026968E-4	45.000004	8
GAATCGG	20	7.026968E-4	45.000004	2
GCCGATT	20	7.026968E-4	45.000004	9
GTCCGTA	20	7.026968E-4	45.000004	26
CGGGACG	20	7.026968E-4	45.000004	6
ACGCTCC	20	7.026968E-4	45.000004	22
CGTAAGG	30	2.161427E-6	45.000004	2
AAGGATC	20	7.026968E-4	45.000004	17
CTATCGC	25	3.8855702E-5	45.0	35
AATATGC	25	3.8855702E-5	45.0	16
GTAGACG	25	3.8855702E-5	45.0	1
CACGTGA	45	3.8380676E-10	45.0	43
GGCGATA	80	0.0	42.187504	8
CGTTAGG	70	0.0	41.785717	2
ACAACGA	65	0.0	41.53846	13
CGAGGGT	60	3.6379788E-12	41.250004	4
ATAGGGA	155	0.0	40.64516	4
GCGTTAG	50	1.0768417E-9	40.5	1