##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935531.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 427573 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14520093644828 31.0 31.0 33.0 28.0 34.0 2 31.102494778669374 31.0 31.0 34.0 28.0 34.0 3 30.92663942765329 31.0 30.0 34.0 27.0 34.0 4 34.77550500148513 35.0 35.0 37.0 32.0 37.0 5 34.79652363456065 35.0 35.0 37.0 32.0 37.0 6 35.0062655967519 36.0 35.0 37.0 32.0 37.0 7 35.49063434781897 37.0 35.0 37.0 33.0 37.0 8 35.335856099426294 37.0 35.0 37.0 33.0 37.0 9 37.16562785769915 39.0 37.0 39.0 34.0 39.0 10 36.42608630573025 38.0 35.0 39.0 32.0 39.0 11 36.65606340905529 39.0 35.0 39.0 32.0 39.0 12 36.86247962336256 39.0 37.0 39.0 33.0 39.0 13 36.946219709850716 39.0 37.0 39.0 33.0 39.0 14 37.93448370219822 40.0 37.0 41.0 33.0 41.0 15 38.119146905908465 40.0 37.0 41.0 33.0 41.0 16 38.088862018883326 40.0 37.0 41.0 34.0 41.0 17 38.01426423090326 39.0 37.0 41.0 33.0 41.0 18 38.03292303302594 39.0 37.0 41.0 34.0 41.0 19 37.939900321114756 39.0 37.0 41.0 34.0 41.0 20 38.036983158431426 40.0 37.0 41.0 34.0 41.0 21 38.02950841142916 40.0 37.0 41.0 34.0 41.0 22 38.1577952770638 40.0 37.0 41.0 34.0 41.0 23 38.191913427648615 40.0 37.0 41.0 34.0 41.0 24 38.19181052124433 40.0 37.0 41.0 34.0 41.0 25 37.80508357637176 40.0 37.0 41.0 33.0 41.0 26 37.93064809985663 40.0 37.0 41.0 34.0 41.0 27 37.94968812343156 40.0 37.0 41.0 34.0 41.0 28 37.88518685698115 40.0 37.0 41.0 33.0 41.0 29 37.87574519438786 40.0 37.0 41.0 33.0 41.0 30 37.60845516438129 40.0 36.0 41.0 33.0 41.0 31 37.63563882658634 40.0 36.0 41.0 33.0 41.0 32 37.6495732892395 40.0 37.0 41.0 33.0 41.0 33 37.6632434695362 40.0 37.0 41.0 33.0 41.0 34 37.65209449614452 40.0 37.0 41.0 33.0 41.0 35 37.68431121703195 40.0 37.0 41.0 33.0 41.0 36 37.55090008022022 40.0 37.0 41.0 33.0 41.0 37 37.525393324648654 40.0 37.0 41.0 33.0 41.0 38 37.42440706031485 40.0 36.0 41.0 33.0 41.0 39 37.41099648481078 40.0 36.0 41.0 33.0 41.0 40 37.36571298936088 40.0 36.0 41.0 33.0 41.0 41 37.21245962677718 39.0 36.0 41.0 32.0 41.0 42 37.242512974392675 40.0 36.0 41.0 32.0 41.0 43 37.198822189427304 39.0 36.0 41.0 32.0 41.0 44 37.1952391755326 39.0 36.0 41.0 32.0 41.0 45 37.19007280628103 39.0 36.0 41.0 32.0 41.0 46 37.09226494657053 39.0 35.0 41.0 32.0 41.0 47 37.03606869470242 39.0 35.0 41.0 32.0 41.0 48 36.99666957455218 39.0 35.0 41.0 32.0 41.0 49 36.996901113961826 39.0 35.0 41.0 32.0 41.0 50 36.89409059973384 39.0 35.0 41.0 31.0 41.0 51 35.68968339909208 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 12.0 9 26.0 10 22.0 11 14.0 12 8.0 13 7.0 14 12.0 15 20.0 16 31.0 17 42.0 18 81.0 19 175.0 20 267.0 21 554.0 22 821.0 23 1157.0 24 1498.0 25 2054.0 26 2711.0 27 3160.0 28 3819.0 29 4646.0 30 5941.0 31 7744.0 32 10772.0 33 15267.0 34 25653.0 35 29751.0 36 34784.0 37 54554.0 38 102139.0 39 119820.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.556646467386855 21.120370088850322 25.817813566338383 11.50516987742444 2 29.837711922876327 26.051224001515532 26.255399662747646 17.855664412860495 3 30.556185727349483 24.979360249594805 28.56635007355469 15.898103949501023 4 27.521850070046515 24.977255345870763 28.440991362878385 19.059903221204333 5 26.204648095179067 29.103568279568638 25.276385552876352 19.415398072375943 6 24.1116721589062 34.43014409235382 25.34725064491911 16.11093310382087 7 78.73392379780762 5.006864324922294 11.192240857116795 5.066971020153284 8 78.99469798139734 5.4968391362410625 9.016472041031589 6.4919908413300185 9 73.33578125840499 7.040435200538855 11.23808098266261 8.385702558393538 10 35.4157067915888 35.198200073437754 17.50835529839349 11.877737836579952 11 22.645255897823297 24.643043410131135 31.991963945337986 20.71973674670758 12 22.008639460396235 21.290633412306203 35.18253023460321 21.51819689269435 13 22.54468827545238 24.090623121665775 35.6011721974961 17.763516405385747 14 17.96909533576723 29.629326454196125 30.861630645527192 21.53994756450945 15 15.734623093600392 27.51483372429971 36.945737920776104 19.804805261323796 16 18.805911505169878 27.76929319671729 31.230456553617746 22.19433874449509 17 18.477078767836137 26.919145970395697 30.17706917883028 24.426706082937883 18 19.602968382007283 25.427938621007407 33.39570085108274 21.57339214590257 19 19.121179307393124 27.86214283876671 30.20957824745716 22.807099606383 20 20.278642477424906 28.376207103816192 31.56092643829241 19.784223980466493 21 20.51135127802738 28.39398184637477 31.896775521372962 19.19789135422489 22 18.81035519080952 24.899373908081195 31.237706777556113 25.05256412355317 23 17.792751179330782 27.238857458258593 31.782409085699985 23.185982276710643 24 20.187897739099522 25.287611706071246 31.00148980408024 23.523000750748995 25 17.961845111828858 29.369487783372666 28.58482645068795 24.083840654110524 26 19.010087166401995 26.85061966026854 30.06784806337163 24.071445109957832 27 20.29688497636661 26.816473444300737 31.069782236015836 21.816859343316814 28 18.269862690113737 26.106419254723757 32.089491151218624 23.53422690394389 29 20.63343569402184 24.778926639427652 31.11515460517853 23.472483061371978 30 21.39213654744336 24.926503778302184 31.022538841320664 22.65882083293379 31 22.833761720220874 26.700937617669968 26.388476353745443 24.07682430836372 32 21.586021568246828 29.459063130740248 27.349247964675037 21.605667336337888 33 19.752884302797415 26.25118985529956 27.97931581273841 26.01661002916461 34 21.201058064938618 24.55346806276355 28.593012187392564 25.65246168490527 35 18.497893926885002 25.321757922039044 30.92337448809911 25.25697366297685 36 22.385183348808273 25.974745832875325 29.15104555245537 22.489025265861034 37 19.043063991411994 26.966857121473993 31.764166586758286 22.22591230035573 38 18.960504989791215 27.897692323883877 28.579681130473627 24.56212155585128 39 20.284723310405475 26.487874585158554 28.080585069684005 25.14681703475196 40 20.226253762515405 22.585149202592305 31.340847060034193 25.847749974858093 41 18.818307049322573 25.43729374866982 28.887230952375383 26.857168249632224 42 21.16854899631174 24.38016432281739 31.866605234661684 22.584681446209185 43 22.369513509973736 25.491319610920236 29.42538467115557 22.713782207950455 44 20.792706742474383 24.683972093654184 28.966983415697435 25.556337748173995 45 20.980744808488843 22.46002437010756 28.22746057398386 28.33177024741974 46 23.20866846129199 23.472015304988854 29.076204531156087 24.243111702563073 47 18.032944082063178 23.86072085936203 33.689685737874 24.41664932070079 48 18.844969163160442 24.240539042455907 30.782345938588264 26.132145855795386 49 20.847668117491047 21.896144050255746 33.72804176128989 23.52814607096332 50 19.980681661377123 21.334368634127973 32.13229086027415 26.552658844220755 51 19.201165648906738 20.964841091462745 28.614061224632987 31.219932034997534 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 140.0 1 277.5 2 415.0 3 1118.0 4 1821.0 5 1217.0 6 613.0 7 635.5 8 658.0 9 649.0 10 640.0 11 647.5 12 655.0 13 711.5 14 768.0 15 764.0 16 760.0 17 705.5 18 651.0 19 757.5 20 864.0 21 927.5 22 991.0 23 1323.0 24 1655.0 25 2366.0 26 3618.0 27 4159.0 28 4964.5 29 5770.0 30 6569.0 31 7368.0 32 8880.5 33 10393.0 34 11115.5 35 11838.0 36 13449.5 37 15061.0 38 16283.0 39 17505.0 40 19386.5 41 21268.0 42 24310.5 43 27353.0 44 30142.0 45 32931.0 46 43264.5 47 53598.0 48 54555.5 49 55513.0 50 53208.0 51 50903.0 52 41153.0 53 31403.0 54 25971.0 55 20539.0 56 17321.5 57 14104.0 58 12477.0 59 10850.0 60 9718.0 61 8586.0 62 7171.5 63 5757.0 64 4752.0 65 3747.0 66 3053.5 67 2360.0 68 1835.0 69 1310.0 70 970.5 71 631.0 72 575.5 73 520.0 74 379.0 75 159.0 76 80.0 77 55.5 78 31.0 79 22.5 80 14.0 81 17.0 82 20.0 83 12.0 84 4.0 85 3.0 86 2.0 87 2.5 88 3.0 89 1.5 90 0.0 91 1.5 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 427573.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.01709769644255 #Duplication Level Percentage of deduplicated Percentage of total 1 71.12092685336799 27.03811224446035 2 11.924321659343434 9.066562029741306 3 4.40105843381119 5.019464053378574 4 2.218702205940263 3.3739447409017425 5 1.4417197930756405 2.740500111212578 6 1.0167052741037226 2.3191310240453773 7 0.8512528466033618 2.2653513843586377 8 0.7862441048620094 2.3912575158232823 9 0.6290045441173012 2.152163448469237 >10 5.476628285996378 34.2223160481056 >50 0.08502665968690681 2.2391321313030836 >100 0.04096174846230547 2.891052266054445 >500 0.0031031627622958692 0.7592757848823312 >1k 0.004344427867214217 3.521737217263417 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCGTCTTCTGC 3074 0.7189415608562748 TruSeq Adapter, Index 16 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCGTCTTC 2567 0.6003653177352172 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGC 2442 0.5711305437901831 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCG 2228 0.5210806107962851 No Hit CCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCGTCTTCTGC 2101 0.49137808046813053 TruSeq Adapter, Index 16 (95% over 22bp) CTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCGTCTTCTGCT 1366 0.319477609671331 TruSeq Adapter, Index 13 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1148 0.2684921639111918 No Hit TCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCGTCTTCTGC 912 0.2132969107029677 TruSeq Adapter, Index 16 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCC 623 0.1457061133420492 No Hit ACTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCGTCTTCTGC 608 0.14219794046864512 TruSeq Adapter, Index 13 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCGTCT 565 0.13214117823155344 No Hit CGCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCGTCTTCTG 510 0.1192778776957385 No Hit GAACTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCGTCTTCT 495 0.11576970482233442 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCGTCTT 481 0.11249541014049062 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGACCTAT 454 0.1061806989683633 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCGTC 451 0.10547906439368247 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3387819156027158E-4 0.0 0.0 0.3328086665902665 0.0 2 2.3387819156027158E-4 0.0 0.0 1.9664478346387635 0.0 3 2.3387819156027158E-4 0.0 0.0 2.56634539599086 0.0 4 2.3387819156027158E-4 0.0 0.0 3.478236464884359 0.0 5 2.3387819156027158E-4 0.0 0.0 6.179061821022375 0.0 6 2.3387819156027158E-4 0.0 0.0 7.3362911128625985 0.0 7 2.3387819156027158E-4 0.0 0.0 8.643670203684517 0.0 8 2.3387819156027158E-4 0.0 0.0 10.725887743145615 0.0 9 2.3387819156027158E-4 0.0 0.0 11.355955591208987 0.0 10 2.3387819156027158E-4 0.0 0.0 13.360759449263634 0.0 11 2.3387819156027158E-4 0.0 0.0 15.698371973908548 0.0 12 2.3387819156027158E-4 0.0 0.0 18.20694945658402 0.0 13 2.3387819156027158E-4 0.0 0.0 18.993014058418094 0.0 14 2.3387819156027158E-4 0.0 0.0 19.304539809576376 0.0 15 2.3387819156027158E-4 0.0 0.0 19.87520259698344 0.0 16 2.3387819156027158E-4 0.0 0.0 20.91058135102076 0.0 17 2.3387819156027158E-4 0.0 0.0 22.454879049893236 0.0 18 2.3387819156027158E-4 0.0 0.0 24.006894729087197 0.0 19 2.3387819156027158E-4 0.0 0.0 25.048588194296645 0.0 20 2.3387819156027158E-4 0.0 0.0 25.962584166914187 0.0 21 2.3387819156027158E-4 0.0 0.0 26.95422769912974 0.0 22 2.3387819156027158E-4 0.0 0.0 28.124554169697337 0.0 23 2.3387819156027158E-4 0.0 0.0 29.232435163118346 0.0 24 2.3387819156027158E-4 0.0 0.0 30.05708966655986 0.0 25 2.3387819156027158E-4 0.0 0.0 30.74469154974706 0.0 26 2.3387819156027158E-4 0.0 0.0 31.421535036122485 0.0 27 2.3387819156027158E-4 0.0 0.0 32.09791076611479 0.0 28 2.3387819156027158E-4 0.0 0.0 32.79393226419816 0.0 29 2.3387819156027158E-4 0.0 0.0 33.480130878236 0.0 30 2.3387819156027158E-4 0.0 0.0 34.27508285134936 0.0 31 2.3387819156027158E-4 0.0 0.0 34.98560479730946 0.0 32 4.6775638312054316E-4 0.0 0.0 35.65683520708745 0.0 33 4.6775638312054316E-4 0.0 0.0 36.30888760515748 0.0 34 7.016345746808148E-4 0.0 0.0 36.99906214845184 0.0 35 7.016345746808148E-4 0.0 0.0 37.7322702789933 0.0 36 7.016345746808148E-4 0.0 0.0 38.37262876748532 0.0 37 7.016345746808148E-4 0.0 0.0 39.04409305545486 0.0 38 7.016345746808148E-4 0.0 0.0 39.66527353223894 0.0 39 7.016345746808148E-4 0.0 0.0 40.324576154247346 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 30 2.162291E-6 45.000004 25 ACGTTAG 20 7.02831E-4 45.000004 1 CGTTGCC 20 7.02831E-4 45.000004 28 GAGTACG 30 2.162291E-6 45.000004 1 TAGCGCG 20 7.02831E-4 45.000004 1 TGAACGG 40 6.7975634E-9 45.000004 2 ATATGCG 30 2.162291E-6 45.000004 1 TACGGGT 20 7.02831E-4 45.000004 4 AACGGGC 30 2.162291E-6 45.000004 4 TCTACCG 35 1.209537E-7 45.000004 36 AGTTGCG 70 0.0 45.000004 1 CTACGAA 40 6.7975634E-9 45.000004 11 CTACCGA 20 7.02831E-4 45.000004 37 CATCGAA 20 7.02831E-4 45.000004 42 CGGTCTA 30 2.162291E-6 45.000004 31 AATAGCG 30 2.162291E-6 45.000004 1 TAGTGCG 20 7.02831E-4 45.000004 1 TCGAACG 20 7.02831E-4 45.000004 1 GCGTAAG 20 7.02831E-4 45.000004 1 ACGGGTA 25 3.886682E-5 45.0 5 >>END_MODULE