SRR2935530.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935530.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	414393
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTC	3788	0.914108105107953	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGC	3426	0.8267514171330114	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCG	2960	0.7142977801265947	No Hit
GCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC	1744	0.4208565299124261	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1722	0.4155475599249987	No Hit
GAACTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCT	803	0.19377740454109987	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCACAAGT	706	0.17036967323289728	No Hit
CTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGCT	699	0.16868045550962493	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCT	621	0.1498577437360187	No Hit
CCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC	611	0.14744457555991536	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTC	571	0.1377919028555019	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCACAAGTCGTA	527	0.1271739628806471	No Hit
CGCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTG	515	0.12427816106932309	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTT	510	0.12307157698127141	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTCACG	20	7.028059E-4	45.0	1
AACCGGC	20	7.028059E-4	45.0	42
CGGCGAA	55	1.8189894E-12	45.0	31
GTCGAAT	40	6.7975634E-9	45.0	43
ATTCGGC	20	7.028059E-4	45.0	12
AGGTTCG	20	7.028059E-4	45.0	1
GTCACGG	25	3.8864724E-5	45.0	2
AGCGAAT	20	7.028059E-4	45.0	32
TGCTACG	20	7.028059E-4	45.0	1
TTGCACG	20	7.028059E-4	45.0	1
TGCAGCG	35	1.2094097E-7	45.0	1
TATACGG	25	3.8864724E-5	45.0	2
GCTCGCG	25	3.8864724E-5	45.0	1
ATTGACG	25	3.8864724E-5	45.0	1
GCGTAAG	45	3.8380676E-10	45.0	1
GCCAACG	25	3.8864724E-5	45.0	1
TACCGAC	20	7.028059E-4	45.0	16
AACACGT	25	3.8864724E-5	45.0	41
CTCGCGG	30	2.162129E-6	44.999996	2
CGTAAGG	60	0.0	44.999996	2