##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935529.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 452063 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.232272935409444 31.0 31.0 33.0 28.0 34.0 2 31.21456080236604 31.0 31.0 34.0 28.0 34.0 3 30.986090434297875 31.0 31.0 34.0 27.0 34.0 4 34.82145630144471 35.0 35.0 37.0 32.0 37.0 5 34.86522453728794 35.0 35.0 37.0 33.0 37.0 6 35.05388850669044 36.0 35.0 37.0 32.0 37.0 7 35.559758263781816 37.0 35.0 37.0 33.0 37.0 8 35.361485014256864 37.0 35.0 37.0 33.0 37.0 9 37.28588714404851 39.0 37.0 39.0 34.0 39.0 10 36.532023191457824 38.0 35.0 39.0 32.0 39.0 11 36.72079334075118 39.0 37.0 39.0 32.0 39.0 12 36.94340390609273 39.0 37.0 39.0 33.0 39.0 13 37.05964655368831 39.0 37.0 39.0 33.0 39.0 14 38.12757292678233 40.0 37.0 41.0 33.0 41.0 15 38.30205745659344 40.0 38.0 41.0 34.0 41.0 16 38.261771036337855 40.0 37.0 41.0 34.0 41.0 17 38.16874639154277 40.0 37.0 41.0 34.0 41.0 18 38.14643312989561 40.0 37.0 41.0 34.0 41.0 19 38.0630664310063 40.0 37.0 41.0 34.0 41.0 20 38.120483206986634 40.0 37.0 41.0 34.0 41.0 21 38.10030681564295 40.0 37.0 41.0 34.0 41.0 22 38.2044316831946 40.0 37.0 41.0 34.0 41.0 23 38.252924924180924 40.0 37.0 41.0 34.0 41.0 24 38.22923132395263 40.0 37.0 41.0 34.0 41.0 25 37.85513965973769 40.0 37.0 41.0 33.0 41.0 26 37.987616770228925 40.0 37.0 41.0 34.0 41.0 27 38.04336121292829 40.0 37.0 41.0 34.0 41.0 28 37.95562565394646 40.0 37.0 41.0 33.0 41.0 29 37.97677093679421 40.0 37.0 41.0 34.0 41.0 30 37.707104983155006 40.0 37.0 41.0 33.0 41.0 31 37.66052076812303 40.0 37.0 41.0 33.0 41.0 32 37.69180844262857 40.0 37.0 41.0 33.0 41.0 33 37.71192953194577 40.0 37.0 41.0 33.0 41.0 34 37.62129835885706 40.0 37.0 41.0 33.0 41.0 35 37.694918628598224 40.0 37.0 41.0 33.0 41.0 36 37.53467547664817 40.0 37.0 41.0 33.0 41.0 37 37.51841225669873 40.0 37.0 41.0 33.0 41.0 38 37.37820171082349 40.0 37.0 41.0 32.0 41.0 39 37.35888803109301 40.0 36.0 41.0 32.0 41.0 40 37.31647137677713 40.0 36.0 41.0 32.0 41.0 41 37.16990330993689 40.0 36.0 41.0 32.0 41.0 42 37.24956256097048 40.0 36.0 41.0 32.0 41.0 43 37.2275235973747 40.0 36.0 41.0 32.0 41.0 44 37.21473555676974 40.0 36.0 41.0 32.0 41.0 45 37.20558638950766 40.0 36.0 41.0 32.0 41.0 46 37.08999630582463 40.0 36.0 41.0 32.0 41.0 47 37.04752434948226 39.0 36.0 41.0 32.0 41.0 48 37.0008958928291 39.0 35.0 41.0 32.0 41.0 49 36.99250325728936 39.0 35.0 41.0 32.0 41.0 50 36.92444858349389 39.0 35.0 41.0 31.0 41.0 51 35.75689671572325 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 8.0 9 21.0 10 13.0 11 21.0 12 14.0 13 17.0 14 14.0 15 17.0 16 25.0 17 57.0 18 87.0 19 182.0 20 355.0 21 586.0 22 995.0 23 1431.0 24 1922.0 25 2413.0 26 3110.0 27 3627.0 28 4112.0 29 4778.0 30 6100.0 31 7926.0 32 10736.0 33 14801.0 34 24781.0 35 29689.0 36 35032.0 37 55600.0 38 107332.0 39 136240.0 40 19.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.55062458108715 21.515142800892797 25.215733205327577 11.718499412692479 2 31.41420554214789 25.617004709520575 25.789768240267396 17.17902150806414 3 30.972010538354166 25.847282347814353 27.43577775664011 15.744929357191365 4 27.658976735543494 24.774644242063605 28.610614007339684 18.95576501505321 5 26.02424883257422 29.622419883954226 24.76889283130891 19.58443845216264 6 24.70385764815966 35.08272077121994 24.945859316068777 15.267562264551623 7 79.91894934997998 5.055047637165616 10.272240815992461 4.753762196861942 8 80.8205935898315 5.976379398446677 8.427807628582743 4.775219383139076 9 74.77785175959988 7.595401525893515 10.284628469925652 7.342118244580955 10 35.60521431747345 36.209333654822444 16.71581173420519 11.469640293498914 11 23.340773299296778 24.961122675379315 32.74410867511829 18.953995350205613 12 22.288486339293417 22.82270391516227 34.2684537332186 20.620356012325715 13 22.491555380555365 24.498134109626314 35.00684639087915 18.003464118939174 14 18.828570354132058 29.036218403187164 31.37062754527577 20.76458369740501 15 17.447125732475342 27.84457033643541 35.7363907243017 18.971913206787548 16 20.13148609817658 27.915799346551257 31.3294828375691 20.623231717703064 17 20.67233991722393 27.21678173174978 30.255738691288602 21.85513965973769 18 20.484313027166568 26.477283033559484 32.27735957156414 20.76104436770981 19 20.645573736403996 27.884830211718274 30.216584856535484 21.253011195342243 20 22.224114780462013 28.044100048002157 31.35182485627003 18.37996031526579 21 21.904026651152606 28.327688839829847 31.346294653621285 18.421989855396262 22 20.30712533430075 25.235199518651164 31.273738394869742 23.183936752178347 23 19.224532863782258 27.738832861791384 31.525694427546604 21.510939846879747 24 20.536960556382628 26.689642815271323 31.56927242441872 21.20412420392733 25 18.77260470332675 29.65936163764785 29.34679458394073 22.221239075084668 26 19.257714079674734 27.580447857931308 30.435138465213917 22.72669959718004 27 21.51005501445595 27.322740414499748 30.562775542346976 20.60442902869733 28 18.01032157022362 27.059723976525397 32.616029181773335 22.313925271477647 29 20.388087501078388 24.939886697208134 30.940598987309293 23.731426814404184 30 23.268659456757135 26.37574851292851 29.9933858776321 20.36220615268226 31 21.82903710323561 27.009509736474786 28.91057219900766 22.250880961281947 32 23.374618139507103 27.55213322036973 28.502443243530216 20.570805396592952 33 23.189024538615193 26.99468879337614 28.387636236542253 21.428650431466412 34 20.441619862718248 27.25527194218505 30.19424283783455 22.10886535726215 35 21.624419605232013 25.84197335327156 29.546103087401537 22.987503954094894 36 21.908450813271603 28.133246914699946 28.825185870111024 21.13311640191743 37 21.76223225523876 27.73529353209619 30.814952783129783 19.687521429535266 38 21.4414805016115 27.29442577693817 29.931005191754245 21.33308852969608 39 22.958746900321415 26.954207709987326 28.87429406963189 21.212751320059372 40 22.242696261361804 25.747075075819076 30.78309881587301 21.22712984694611 41 19.15883405631516 28.455325916962902 29.29458947093657 23.09125055578537 42 20.805285988899776 26.39654207488779 31.072439018455395 21.72573291775704 43 22.708339324386202 26.233290492696813 29.489695020384328 21.568675162532656 44 21.525981998084337 25.539581872438134 29.82681617385187 23.107619955625655 45 22.115501600440645 24.603429168058437 28.60088085067789 24.680188380823026 46 23.585871880689197 26.19856082006269 28.37856670419831 21.837000595049805 47 19.72202989406344 26.546963586933682 32.164985853741626 21.566020665261256 48 20.541163510395673 25.687348887212625 30.71563034355831 23.05585725883339 49 21.45585902849824 24.1119047566379 32.506088753116266 21.92614746174759 50 20.996631000546383 24.457874234343443 31.156940514928227 23.388554250181944 51 19.92023235699449 24.125619659206794 29.44766548025386 26.50648250354486 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 163.0 1 266.5 2 370.0 3 1476.0 4 2582.0 5 1721.5 6 861.0 7 913.0 8 965.0 9 940.5 10 916.0 11 880.5 12 845.0 13 835.5 14 826.0 15 865.0 16 904.0 17 937.0 18 970.0 19 1074.5 20 1179.0 21 1320.0 22 1461.0 23 1929.5 24 2398.0 25 3042.0 26 4200.0 27 4714.0 28 6158.5 29 7603.0 30 8693.0 31 9783.0 32 11067.5 33 12352.0 34 14125.0 35 15898.0 36 17298.5 37 18699.0 38 20008.0 39 21317.0 40 23788.0 41 26259.0 42 27808.5 43 29358.0 44 32424.5 45 35491.0 46 43465.5 47 51440.0 48 50332.5 49 49225.0 50 47108.5 51 44992.0 52 37744.0 53 30496.0 54 26351.0 55 22206.0 56 19269.0 57 16332.0 58 14124.0 59 11916.0 60 10827.5 61 9739.0 62 8386.0 63 7033.0 64 5574.5 65 4116.0 66 3236.0 67 2356.0 68 1710.0 69 1064.0 70 886.0 71 708.0 72 532.0 73 356.0 74 325.5 75 190.5 76 86.0 77 80.0 78 74.0 79 45.5 80 17.0 81 9.5 82 2.0 83 2.0 84 2.0 85 2.5 86 3.0 87 3.5 88 4.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 452063.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.61893310999914 #Duplication Level Percentage of deduplicated Percentage of total 1 71.97495691669424 26.35646132927496 2 10.027718033445256 7.344086718253279 3 3.6244257067406407 3.981678075518906 4 1.9928084367925203 2.91898075391789 5 1.4735167037482626 2.697930480551202 6 1.2428765703945472 2.730768839715784 7 1.0733394405406647 2.751318162423775 8 0.9589061304393884 2.809129555946246 9 0.8604107975713939 2.83565928990491 >10 6.686137511203754 39.232795790265904 >50 0.053752015926468 1.3747075806694917 >100 0.02443273451203091 1.706194179197345 >500 0.0030540918140038635 0.6739332802728895 >1k 0.003664910176804637 2.586355964087428 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCGTGGATATCGTATGCCGTCTTC 2670 0.5906256428860579 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGTGGATATCGTATGCCG 2134 0.47205809809694665 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGTGGATATCGTATGC 2095 0.4634309819649031 No Hit GCTGTCTCTTATACACATCTGACGCCGTGGATATCGTATGCCGTCTTCTGC 1878 0.4154288229737891 RNA PCR Primer, Index 23 (96% over 25bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1530 0.33844840210324667 No Hit CCTGTCTCTTATACACATCTGACGCCGTGGATATCGTATGCCGTCTTCTGC 1256 0.27783738107299205 RNA PCR Primer, Index 30 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCGTGGATATCGTATGCCGTCTTCTGCT 778 0.1720999064289712 RNA PCR Primer, Index 30 (95% over 24bp) GAACTGTCTCTTATACACATCTGACGCCGTGGATATCGTATGCCGTCTTCT 650 0.14378526886739237 RNA PCR Primer, Index 23 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCCGTGGATATCGTATGCCGTCTTCTG 553 0.12232808259025843 RNA PCR Primer, Index 30 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCCGTGGATATCGTATGCCGTCTTCTGC 520 0.11502821509391391 RNA PCR Primer, Index 23 (96% over 25bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 512 0.11325855024631522 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGTGGATATCGTATGCCGTCT 466 0.10308297737262286 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.18006339824316522 0.0 2 0.0 0.0 0.0 1.1058193216432224 0.0 3 0.0 0.0 0.0 1.521911768934861 0.0 4 0.0 0.0 0.0 2.1811119246653674 0.0 5 0.0 0.0 0.0 4.107613319382476 0.0 6 0.0 0.0 0.0 4.957494862441739 0.0 7 0.0 0.0 0.0 5.8434333267708265 0.0 8 0.0 0.0 0.0 7.1885998190517695 0.0 9 0.0 0.0 0.0 7.648491471321475 0.0 10 0.0 0.0 0.0 9.068868719625362 0.0 11 0.0 0.0 0.0 10.516233356855128 0.0 12 0.0 0.0 0.0 12.214226778126058 0.0 13 0.0 0.0 0.0 12.743356567558061 0.0 14 0.0 0.0 0.0 12.951734603362805 0.0 15 0.0 0.0 0.0 13.379329872163835 0.0 16 0.0 0.0 0.0 14.092947221958001 0.0 17 0.0 0.0 0.0 15.057414563899279 0.0 18 0.0 0.0 0.0 16.041348219164142 0.0 19 0.0 0.0 0.0 16.761380604030855 0.0 20 0.0 0.0 0.0 17.36771202243935 0.0 21 0.0 0.0 0.0 18.09062011268341 0.0 22 0.0 0.0 0.0 18.911744601969193 0.0 23 0.0 0.0 0.0 19.658100751443936 0.0 24 0.0 0.0 0.0 20.251823307813293 0.0 25 0.0 0.0 0.0 20.79820732950938 0.0 26 0.0 0.0 0.0 21.300570938121457 0.0 27 0.0 0.0 0.0 21.823064484374964 0.0 28 0.0 0.0 0.0 22.332727960483385 0.0 29 0.0 0.0 0.0 22.850133720300047 0.0 30 0.0 0.0 0.0 23.468189168323885 0.0 31 0.0 0.0 0.0 24.01899735213897 0.0 32 0.0 0.0 0.0 24.550339222630473 0.0 33 0.0 0.0 0.0 25.05270283124255 0.0 34 0.0 0.0 0.0 25.5851507422638 0.0 35 0.0 0.0 0.0 26.147461747588277 0.0 36 0.0 0.0 0.0 26.660000929074045 0.0 37 0.0 0.0 0.0 27.159710040414723 0.0 38 0.0 0.0 0.0 27.656764654484 0.0 39 0.0 0.0 0.0 28.180806657479156 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGTACG 25 3.8870377E-5 45.0 1 CGATTAG 20 7.0287404E-4 45.0 10 CGCGAGG 25 3.8870377E-5 45.0 2 GCGTTAG 40 6.7993824E-9 45.0 1 CCGTCGC 25 3.8870377E-5 45.0 36 ATCCGTC 20 7.0287404E-4 45.0 28 TCGTGCG 20 7.0287404E-4 45.0 1 GCTTCGG 20 7.0287404E-4 45.0 2 TAACACG 20 7.0287404E-4 45.0 1 CGTAAGG 55 1.8189894E-12 45.0 2 TGGGCGC 20 7.0287404E-4 45.0 6 GCTACGC 20 7.0287404E-4 45.0 1 CGACTCA 20 7.0287404E-4 45.0 32 CCTATCG 25 3.8870377E-5 45.0 40 AAGTGCG 25 3.8870377E-5 45.0 1 GCCGTCG 25 3.8870377E-5 45.0 35 TATCCGG 20 7.0287404E-4 45.0 2 TCGCAAG 30 2.1625692E-6 44.999996 1 ATTAGCG 30 2.1625692E-6 44.999996 1 CGTTTTT 905 0.0 41.270714 1 >>END_MODULE